Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0545
         (591 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1096 + 23931862-23931931,23932406-23932549,23932888-239329...   102   2e-22
02_02_0392 - 9649858-9650405,9650499-9650670,9650788-9650926,965...    30   1.6  
08_02_0853 - 21898293-21899564,21899910-21899964,21900079-21901034     29   3.7  
03_05_0601 + 26039326-26039367,26039958-26040035,26040136-260403...    28   6.4  
12_02_0992 + 25083397-25083537,25084198-25084228,25084971-250851...    27   8.5  
08_02_1631 + 28381248-28381418,28382069-28382144,28382925-283829...    27   8.5  

>07_03_1096 +
           23931862-23931931,23932406-23932549,23932888-23932986,
           23933422-23933498,23933813-23933921,23934973-23935301,
           23935838-23935930
          Length = 306

 Score =  102 bits (244), Expect = 2e-22
 Identities = 48/95 (50%), Positives = 63/95 (66%)
 Frame = +1

Query: 262 LKEANKSALKLLEIIVNNFPSFRDEAVYKGQKLGIYKRAQILVADLWNFFGGKSWGEFED 441
           +K A  SA  L+E+I  +FP FRD ++YKG ++ +YKRAQI VADLW  F G+++GEF D
Sbjct: 147 VKSAGNSAATLIELITRHFPGFRDHSLYKGHQVFLYKRAQIFVADLWGAFKGQNYGEFHD 206

Query: 442 IDKITMFADYRVPQVLVYFGALIYSDELMEKIEKT 546
           I  IT+FADY VP VL   G L Y   L   I+ +
Sbjct: 207 IKSITIFADYIVPAVLRELGILKYGSNLSCSIDSS 241


>02_02_0392 -
           9649858-9650405,9650499-9650670,9650788-9650926,
           9651113-9651334,9651422-9651495,9653042-9653661,
           9653810-9653965,9655250-9655347,9655443-9655534,
           9655891-9655977
          Length = 735

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = +2

Query: 23  WTVGGHSGYYALEAALDRAIKEGYDI 100
           W VGG+ G  A+ AA+D AI +G D+
Sbjct: 256 WGVGGNFGDAAVLAAVDDAINDGVDV 281


>08_02_0853 - 21898293-21899564,21899910-21899964,21900079-21901034
          Length = 760

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
 Frame = +1

Query: 424 WGEFEDIDKITMFADYR----VPQVLVYFGALIYSDELMEKIEKTIYYCKVAQK 573
           W E EDI    +F DYR    +P      G  IY  +  E  +K I+Y   A+K
Sbjct: 680 WVEIEDIGGGALFLDYRASIALPSSEAGHGNRIYFPKFSEDGKKAIFYDLEAKK 733


>03_05_0601 +
           26039326-26039367,26039958-26040035,26040136-26040303,
           26040994-26041042,26041502-26041575,26041940-26041948
          Length = 139

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
 Frame = +2

Query: 23  WTVGGHSGYYALEAALDRAIKEG---YDITNPEYYSKITTEQLEMIMRGDNEAKIPLFTE 193
           W   G   Y++L     R        YDITNP  +++      E+  +G++   + L   
Sbjct: 65  WDTAGQERYHSLAPMYYRGAAAAIVVYDITNPASFTRAKKWVQELQAQGNSSTVVALAGN 124

Query: 194 RMSVLHETGAILLEK 238
           +  +L ET  + +E+
Sbjct: 125 KADLL-ETRQVQIEE 138


>12_02_0992 +
           25083397-25083537,25084198-25084228,25084971-25085139,
           25085228-25085291,25085408-25085474,25086543-25086586,
           25086835-25086922,25087079-25087238,25087659-25087779,
           25087859-25087942,25088043-25088162,25088689-25088901,
           25088995-25089054,25089144-25089262,25089407-25089465,
           25089585-25089919
          Length = 624

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -2

Query: 461 NIVILSISSNSPHDLPPKKFHRSATKICA 375
           NI + ++ S  P +LPP  F  S ++ CA
Sbjct: 230 NIPVENVPSEPPRELPPILFASSGSRTCA 258


>08_02_1631 +
           28381248-28381418,28382069-28382144,28382925-28382995,
           28383375-28383460,28384359-28384423,28384727-28385067
          Length = 269

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -3

Query: 427 PTIYHQRNSTDQPPKSVLFCKYLIFALCRQP 335
           PT  H    T  P +SV  C++    LCR P
Sbjct: 225 PTQAHGHRCTGTPCRSVSACRHRYAGLCRSP 255


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,087,595
Number of Sequences: 37544
Number of extensions: 279409
Number of successful extensions: 696
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 689
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 696
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1400060088
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)