Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0541
         (679 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      25   0.57 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      25   0.57 
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    24   1.3  
AY600515-1|AAT11863.1|  134|Tribolium castaneum optomotor-blind-...    22   5.3  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   7.0  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   7.0  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   7.0  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   7.0  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   7.0  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   9.3  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 25.0 bits (52), Expect = 0.57
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +1

Query: 535 LTKQLKDDSIYNFVKGDSGRKLL 603
           L K L  DS+Y+F+   + RKLL
Sbjct: 361 LYKSLGPDSVYSFINNLTDRKLL 383


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 25.0 bits (52), Expect = 0.57
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +1

Query: 535 LTKQLKDDSIYNFVKGDSGRKLL 603
           L K L  DS+Y+F+   + RKLL
Sbjct: 253 LYKSLGPDSVYSFINNLTDRKLL 275


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = -3

Query: 521 VIKCEISGFEKGSFFWNTPFKLEGNKYKLLFTY 423
           ++K   +  +KG  FW +PF +    +  + TY
Sbjct: 381 ILKTVSNRNDKGDIFWFSPFLVANLAFVTIVTY 413


>AY600515-1|AAT11863.1|  134|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 134

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +3

Query: 36  NNIKESRRVLLIKLIHKYNP 95
           NNI +     ++  +HKY P
Sbjct: 81  NNISDKHGFTILNSMHKYQP 100


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -2

Query: 375 MLAKAQILYHIQCIKPGNSFGPYS 304
           +L+  + L+H +C KP   + P S
Sbjct: 25  VLSSDEELFHQKCPKPAPIYSPVS 48


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 535 LTKQLKDDSIYNFVKGDSGRK 597
           +T QLK D +  F   D GR+
Sbjct: 96  MTSQLKPDKVTVFCNRDLGRE 116


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 535 LTKQLKDDSIYNFVKGDSGRK 597
           +T QLK D +  F   D GR+
Sbjct: 96  MTSQLKPDKVTVFCNRDLGRE 116


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 535 LTKQLKDDSIYNFVKGDSGRK 597
           +T QLK D +  F   D GR+
Sbjct: 96  MTSQLKPDKVTVFCNRDLGRE 116


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 535 LTKQLKDDSIYNFVKGDSGRK 597
           +T QLK D +  F   D GR+
Sbjct: 96  MTSQLKPDKVTVFCNRDLGRE 116


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +3

Query: 63  LLIKLIHKYNPTV 101
           +++  +HKY PTV
Sbjct: 144 IMLNSLHKYKPTV 156


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,647
Number of Sequences: 336
Number of extensions: 2889
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)