Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0541
         (679 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_05_0034 + 8431753-8431790,8431940-8432063,8432726-8433038,843...    29   4.5  
07_03_1396 - 26259614-26259739,26259853-26259939,26260032-262604...    28   7.9  

>10_05_0034 +
           8431753-8431790,8431940-8432063,8432726-8433038,
           8433189-8433251,8433778-8434058
          Length = 272

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -3

Query: 413 FLAAGWSGFIGDICSLRPKSCIIFSVLSPVT 321
           +++ GW  F+ ++  LR   C+ FSV SP T
Sbjct: 94  YISKGWKKFV-ELTDLRVGQCVRFSVSSPST 123


>07_03_1396 -
           26259614-26259739,26259853-26259939,26260032-26260409,
           26260497-26260692,26260794-26261032,26261132-26261272
          Length = 388

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = -1

Query: 622 SWVKCISAISFPNLLSRSYKS 560
           SW+ CIS ISF  LLS +  S
Sbjct: 202 SWIDCISNISFEELLSEAAPS 222


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,421,462
Number of Sequences: 37544
Number of extensions: 284000
Number of successful extensions: 506
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 506
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1726796312
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)