Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0541
         (679 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U26446-1|AAA67690.1|  477|Homo sapiens protoporphyrinogen oxidas...   100   9e-21
D38537-1|BAA07538.1|  477|Homo sapiens protoporphyrinogen oxidas...   100   9e-21
BC002357-1|AAH02357.1|  477|Homo sapiens protoporphyrinogen oxid...   100   9e-21
AY032687-1|AAK50376.1|  205|Homo sapiens protoporphyrinogen oxid...   100   9e-21
AL590714-4|CAH72144.1|  477|Homo sapiens protoporphyrinogen oxid...   100   9e-21

>U26446-1|AAA67690.1|  477|Homo sapiens protoporphyrinogen oxidase
           protein.
          Length = 477

 Score = 99.5 bits (237), Expect = 9e-21
 Identities = 52/142 (36%), Positives = 89/142 (62%), Gaps = 5/142 (3%)
 Frame = +1

Query: 256 IKSIRTKD-YVFEQGPRTIRPKGVTGLNTLNMIQDLGLSEHISPIKPDHPAARNRMIYVN 432
           I+S+R  +  +FE GPR IRP G  G  TL ++ +LGL   + P++ DHPAA+NR +YV 
Sbjct: 43  IRSVRGPNGAIFELGPRGIRPAGALGARTLLLVSELGLDSEVLPVRGDHPAAQNRFLYVG 102

Query: 433 NNLYLLPSSLKGVFQKNEPFSKPLISHFITI*RSLTK---QLKDDSIYNFVKGDSGRKLL 603
             L+ LP+ L+G+ + + PFSKPL   F    R LTK   +  D+++++F +   G ++ 
Sbjct: 103 GALHALPTGLRGLLRPSPPFSKPL---FWAGLRELTKPRGKEPDETVHSFAQRRLGPEVA 159

Query: 604 -ICISPMIVGICAGDAKEISVK 666
            + +  +  G+ AG+++E+S++
Sbjct: 160 SLAMDSLCRGVFAGNSRELSIR 181


>D38537-1|BAA07538.1|  477|Homo sapiens protoporphyrinogen oxidase
           protein.
          Length = 477

 Score = 99.5 bits (237), Expect = 9e-21
 Identities = 52/142 (36%), Positives = 89/142 (62%), Gaps = 5/142 (3%)
 Frame = +1

Query: 256 IKSIRTKD-YVFEQGPRTIRPKGVTGLNTLNMIQDLGLSEHISPIKPDHPAARNRMIYVN 432
           I+S+R  +  +FE GPR IRP G  G  TL ++ +LGL   + P++ DHPAA+NR +YV 
Sbjct: 43  IRSVRGPNGAIFELGPRGIRPAGALGARTLLLVSELGLDSEVLPVRGDHPAAQNRFLYVG 102

Query: 433 NNLYLLPSSLKGVFQKNEPFSKPLISHFITI*RSLTK---QLKDDSIYNFVKGDSGRKLL 603
             L+ LP+ L+G+ + + PFSKPL   F    R LTK   +  D+++++F +   G ++ 
Sbjct: 103 GALHALPTGLRGLLRPSPPFSKPL---FWAGLRELTKPRGKEPDETVHSFAQRRLGPEVA 159

Query: 604 -ICISPMIVGICAGDAKEISVK 666
            + +  +  G+ AG+++E+S++
Sbjct: 160 SLAMDSLCRGVFAGNSRELSIR 181


>BC002357-1|AAH02357.1|  477|Homo sapiens protoporphyrinogen oxidase
           protein.
          Length = 477

 Score = 99.5 bits (237), Expect = 9e-21
 Identities = 52/142 (36%), Positives = 89/142 (62%), Gaps = 5/142 (3%)
 Frame = +1

Query: 256 IKSIRTKD-YVFEQGPRTIRPKGVTGLNTLNMIQDLGLSEHISPIKPDHPAARNRMIYVN 432
           I+S+R  +  +FE GPR IRP G  G  TL ++ +LGL   + P++ DHPAA+NR +YV 
Sbjct: 43  IRSVRGPNGAIFELGPRGIRPAGALGARTLLLVSELGLDSEVLPVRGDHPAAQNRFLYVG 102

Query: 433 NNLYLLPSSLKGVFQKNEPFSKPLISHFITI*RSLTK---QLKDDSIYNFVKGDSGRKLL 603
             L+ LP+ L+G+ + + PFSKPL   F    R LTK   +  D+++++F +   G ++ 
Sbjct: 103 GALHALPTGLRGLLRPSPPFSKPL---FWAGLRELTKPRGKEPDETVHSFAQRRLGPEVA 159

Query: 604 -ICISPMIVGICAGDAKEISVK 666
            + +  +  G+ AG+++E+S++
Sbjct: 160 SLAMDSLCRGVFAGNSRELSIR 181


>AY032687-1|AAK50376.1|  205|Homo sapiens protoporphyrinogen oxidase
           protein.
          Length = 205

 Score = 99.5 bits (237), Expect = 9e-21
 Identities = 52/142 (36%), Positives = 89/142 (62%), Gaps = 5/142 (3%)
 Frame = +1

Query: 256 IKSIRTKD-YVFEQGPRTIRPKGVTGLNTLNMIQDLGLSEHISPIKPDHPAARNRMIYVN 432
           I+S+R  +  +FE GPR IRP G  G  TL ++ +LGL   + P++ DHPAA+NR +YV 
Sbjct: 43  IRSVRGPNGAIFELGPRGIRPAGALGARTLLLVSELGLDSEVLPVRGDHPAAQNRFLYVG 102

Query: 433 NNLYLLPSSLKGVFQKNEPFSKPLISHFITI*RSLTK---QLKDDSIYNFVKGDSGRKLL 603
             L+ LP+ L+G+ + + PFSKPL   F    R LTK   +  D+++++F +   G ++ 
Sbjct: 103 GALHALPTGLRGLLRPSPPFSKPL---FWAGLRELTKPRGKEPDETVHSFAQRRLGPEVA 159

Query: 604 -ICISPMIVGICAGDAKEISVK 666
            + +  +  G+ AG+++E+S++
Sbjct: 160 SLAMDSLCRGVFAGNSRELSIR 181


>AL590714-4|CAH72144.1|  477|Homo sapiens protoporphyrinogen oxidase
           protein.
          Length = 477

 Score = 99.5 bits (237), Expect = 9e-21
 Identities = 52/142 (36%), Positives = 89/142 (62%), Gaps = 5/142 (3%)
 Frame = +1

Query: 256 IKSIRTKD-YVFEQGPRTIRPKGVTGLNTLNMIQDLGLSEHISPIKPDHPAARNRMIYVN 432
           I+S+R  +  +FE GPR IRP G  G  TL ++ +LGL   + P++ DHPAA+NR +YV 
Sbjct: 43  IRSVRGPNGAIFELGPRGIRPAGALGARTLLLVSELGLDSEVLPVRGDHPAAQNRFLYVG 102

Query: 433 NNLYLLPSSLKGVFQKNEPFSKPLISHFITI*RSLTK---QLKDDSIYNFVKGDSGRKLL 603
             L+ LP+ L+G+ + + PFSKPL   F    R LTK   +  D+++++F +   G ++ 
Sbjct: 103 GALHALPTGLRGLLRPSPPFSKPL---FWAGLRELTKPRGKEPDETVHSFAQRRLGPEVA 159

Query: 604 -ICISPMIVGICAGDAKEISVK 666
            + +  +  G+ AG+++E+S++
Sbjct: 160 SLAMDSLCRGVFAGNSRELSIR 181


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,373,139
Number of Sequences: 237096
Number of extensions: 1711833
Number of successful extensions: 2887
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2887
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)