Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0541
         (679 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058695-1|AAL13924.1|  475|Drosophila melanogaster LD41392p pro...   128   9e-30
AF098937-1|AAF00577.1|  475|Drosophila melanogaster protoporphyr...   128   9e-30
AE014297-3593|AAF56323.1|  475|Drosophila melanogaster CG5796-PA...   128   9e-30
BT021471-1|AAX33619.1| 1017|Drosophila melanogaster AT06470p pro...    29   7.7  
AE014134-200|AAF51420.1| 1017|Drosophila melanogaster CG14339-PA...    29   7.7  

>AY058695-1|AAL13924.1|  475|Drosophila melanogaster LD41392p
           protein.
          Length = 475

 Score =  128 bits (308), Expect = 9e-30
 Identities = 66/140 (47%), Positives = 95/140 (67%), Gaps = 3/140 (2%)
 Frame = +1

Query: 268 RTKDYVFEQGPRTIRPKGVTGLNTLNMIQDLGLSEHISPIKPDHPAARNRMIYVNNNLYL 447
           + ++++FE GPRTIRP G  G NTL +++DL L   ++PI+  H AARNRM+Y    L +
Sbjct: 46  KDRNFIFESGPRTIRPVGEPGANTLELVEDLKLE--VTPIRRSHVAARNRMLYAKGQLCM 103

Query: 448 LPSSLKGVFQKNEPFSKPLISHFITI*RSLTK--QLKDDSIYNFVKGDSGRKLL-ICISP 618
           LP+S KG+F    PF+KPL    +    + +K  +L+D+SIY+F +   G+++    ISP
Sbjct: 104 LPNSPKGLFGVLPPFTKPLYKAVLRDLFTASKKAKLEDESIYSFAERRFGKEIADYAISP 163

Query: 619 MIVGICAGDAKEISVKXLME 678
           MI GICAGDA+EISV+ LME
Sbjct: 164 MICGICAGDAREISVRFLME 183


>AF098937-1|AAF00577.1|  475|Drosophila melanogaster
           protoporphyrinogen oxidase protein.
          Length = 475

 Score =  128 bits (308), Expect = 9e-30
 Identities = 66/140 (47%), Positives = 95/140 (67%), Gaps = 3/140 (2%)
 Frame = +1

Query: 268 RTKDYVFEQGPRTIRPKGVTGLNTLNMIQDLGLSEHISPIKPDHPAARNRMIYVNNNLYL 447
           + ++++FE GPRTIRP G  G NTL +++DL L   ++PI+  H AARNRM+Y    L +
Sbjct: 46  KDRNFIFESGPRTIRPVGEPGANTLELVEDLKLE--VTPIRRSHVAARNRMLYAKGQLCM 103

Query: 448 LPSSLKGVFQKNEPFSKPLISHFITI*RSLTK--QLKDDSIYNFVKGDSGRKLL-ICISP 618
           LP+S KG+F    PF+KPL    +    + +K  +L+D+SIY+F +   G+++    ISP
Sbjct: 104 LPNSPKGLFGVLPPFTKPLYKAVLRDLFTASKKAKLEDESIYSFAERRFGKEIADYAISP 163

Query: 619 MIVGICAGDAKEISVKXLME 678
           MI GICAGDA+EISV+ LME
Sbjct: 164 MICGICAGDAREISVRFLME 183


>AE014297-3593|AAF56323.1|  475|Drosophila melanogaster CG5796-PA
           protein.
          Length = 475

 Score =  128 bits (308), Expect = 9e-30
 Identities = 66/140 (47%), Positives = 95/140 (67%), Gaps = 3/140 (2%)
 Frame = +1

Query: 268 RTKDYVFEQGPRTIRPKGVTGLNTLNMIQDLGLSEHISPIKPDHPAARNRMIYVNNNLYL 447
           + ++++FE GPRTIRP G  G NTL +++DL L   ++PI+  H AARNRM+Y    L +
Sbjct: 46  KDRNFIFESGPRTIRPVGEPGANTLELVEDLKLE--VTPIRRSHVAARNRMLYAKGQLCM 103

Query: 448 LPSSLKGVFQKNEPFSKPLISHFITI*RSLTK--QLKDDSIYNFVKGDSGRKLL-ICISP 618
           LP+S KG+F    PF+KPL    +    + +K  +L+D+SIY+F +   G+++    ISP
Sbjct: 104 LPNSPKGLFGVLPPFTKPLYKAVLRDLFTASKKAKLEDESIYSFAERRFGKEIADYAISP 163

Query: 619 MIVGICAGDAKEISVKXLME 678
           MI GICAGDA+EISV+ LME
Sbjct: 164 MICGICAGDAREISVRFLME 183


>BT021471-1|AAX33619.1| 1017|Drosophila melanogaster AT06470p
           protein.
          Length = 1017

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 21/83 (25%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
 Frame = +1

Query: 244 LRRMIKSIRTKDYVFEQGPRTIRPKGVTGLNTLNMIQ------DLGLSEHISP-IKPDHP 402
           L R I  ++   +VFE   R+++P  VTGL +   +Q      +L  SE+++P  +   P
Sbjct: 274 LERKIICMQDNHHVFESFRRSVKPWNVTGLKSAMEVQRHRIFSELFHSENLTPDFEEIDP 333

Query: 403 AARNRMIYVNNNLYLLPSSLKGV 471
           A    ++  + + ++L  S+  +
Sbjct: 334 AMDEALVCNSFHRFILTQSMADI 356


>AE014134-200|AAF51420.1| 1017|Drosophila melanogaster CG14339-PA
           protein.
          Length = 1017

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 21/83 (25%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
 Frame = +1

Query: 244 LRRMIKSIRTKDYVFEQGPRTIRPKGVTGLNTLNMIQ------DLGLSEHISP-IKPDHP 402
           L R I  ++   +VFE   R+++P  VTGL +   +Q      +L  SE+++P  +   P
Sbjct: 274 LERKIICMQDNHHVFESFRRSVKPWNVTGLKSAMEVQRHRLFSELFHSENLTPDFEEIDP 333

Query: 403 AARNRMIYVNNNLYLLPSSLKGV 471
           A    ++  + + ++L  S+  +
Sbjct: 334 AMDEALVCNSFHRFILTQSMADI 356


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,980,180
Number of Sequences: 53049
Number of extensions: 496874
Number of successful extensions: 806
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 785
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 797
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2951284050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)