Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0539
(668 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 113 8e-26
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 113 8e-26
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 61 6e-10
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 61 6e-10
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 61 6e-10
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 55 4e-08
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 55 4e-08
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 51 6e-07
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 48 6e-06
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 48 6e-06
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 46 2e-05
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 46 2e-05
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 46 2e-05
AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical... 40 0.001
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 40 0.001
L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein. 31 0.98
AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock pr... 31 0.98
Z50795-6|CAD59152.2| 707|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z50795-5|CAA90665.2| 705|Caenorhabditis elegans Hypothetical pr... 30 1.7
U41110-1|AAA82415.1| 506|Caenorhabditis elegans Hypothetical pr... 29 3.9
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 113 bits (273), Expect = 8e-26
Identities = 62/127 (48%), Positives = 78/127 (61%)
Frame = +2
Query: 248 ANQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIAR 427
A QHPTAS+IA+ VLLIGELLKQA+ + EGLHPRI+TEGF+ A
Sbjct: 68 AIQHPTASMIAKASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVTEGFEWAN 127
Query: 428 NKSLEVLESMKIPIEIARENLVDVARTHSKLRSTQAWADVLTDACVDAVLTIRTPGKPVD 607
K+LE+LE K + R+ LV+V RT + + Q AD +T+ VDAVL IR G+ D
Sbjct: 128 TKTLELLEKFKKEAPVERDLLVEVCRTALRTKLHQKLADHITECVVDAVLAIRRDGEEPD 187
Query: 608 LHMGEIM 628
LHM E M
Sbjct: 188 LHMVEKM 194
Score = 111 bits (267), Expect = 4e-25
Identities = 52/69 (75%), Positives = 61/69 (88%)
Frame = +3
Query: 48 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDG 227
M++I LNPKAE AR A AL +NIS A+G+QDVM++NLGPKGT+KMLVSGAGDIK+TKDG
Sbjct: 1 MSSIQCLNPKAELARHAAALELNISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDG 60
Query: 228 NVLLHEMQI 254
NVLLHEM I
Sbjct: 61 NVLLHEMAI 69
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 113 bits (273), Expect = 8e-26
Identities = 62/127 (48%), Positives = 78/127 (61%)
Frame = +2
Query: 248 ANQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIAR 427
A QHPTAS+IA+ VLLIGELLKQA+ + EGLHPRI+TEGF+ A
Sbjct: 68 AIQHPTASMIAKASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVTEGFEWAN 127
Query: 428 NKSLEVLESMKIPIEIARENLVDVARTHSKLRSTQAWADVLTDACVDAVLTIRTPGKPVD 607
K+LE+LE K + R+ LV+V RT + + Q AD +T+ VDAVL IR G+ D
Sbjct: 128 TKTLELLEKFKKEAPVERDLLVEVCRTALRTKLHQKLADHITECVVDAVLAIRRDGEEPD 187
Query: 608 LHMGEIM 628
LHM E M
Sbjct: 188 LHMVEKM 194
Score = 111 bits (267), Expect = 4e-25
Identities = 52/69 (75%), Positives = 61/69 (88%)
Frame = +3
Query: 48 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDG 227
M++I LNPKAE AR A AL +NIS A+G+QDVM++NLGPKGT+KMLVSGAGDIK+TKDG
Sbjct: 1 MSSIQCLNPKAELARHAAALELNISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDG 60
Query: 228 NVLLHEMQI 254
NVLLHEM I
Sbjct: 61 NVLLHEMAI 69
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 61.3 bits (142), Expect = 6e-10
Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 3/129 (2%)
Frame = +2
Query: 254 QHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNK 433
QH A L+ V+L G LL++A+ I G+HP I +GFD+A K
Sbjct: 85 QHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKK 144
Query: 434 SLEVLESM--KIPIEIARENLVDVARTHSKLRSTQAWADVLTDACVDAVLTIR-TPGKPV 604
+LE L+S+ K P+E RE LV+ A+T + + VDAVL++ K V
Sbjct: 145 ALETLDSISDKFPVE-NRERLVETAQTSLGSKIVNRSLRQFAEIAVDAVLSVADIESKDV 203
Query: 605 DLHMGEIMG 631
+ M ++ G
Sbjct: 204 NFEMIKMEG 212
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/52 (40%), Positives = 36/52 (69%)
Frame = +3
Query: 99 QALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQI 254
+A+ +I AA+ + + ++T+LGP+G KMLVS GD+ IT DG ++ +M +
Sbjct: 33 EAVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDV 84
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 61.3 bits (142), Expect = 6e-10
Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 3/129 (2%)
Frame = +2
Query: 254 QHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNK 433
QH A L+ V+L G LL++A+ I G+HP I +GFD+A K
Sbjct: 85 QHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKK 144
Query: 434 SLEVLESM--KIPIEIARENLVDVARTHSKLRSTQAWADVLTDACVDAVLTIR-TPGKPV 604
+LE L+S+ K P+E RE LV+ A+T + + VDAVL++ K V
Sbjct: 145 ALETLDSISDKFPVE-NRERLVETAQTSLGSKIVNRSLRQFAEIAVDAVLSVADIESKDV 203
Query: 605 DLHMGEIMG 631
+ M ++ G
Sbjct: 204 NFEMIKMEG 212
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/52 (40%), Positives = 36/52 (69%)
Frame = +3
Query: 99 QALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQI 254
+A+ +I AA+ + + ++T+LGP+G KMLVS GD+ IT DG ++ +M +
Sbjct: 33 EAVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDV 84
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 61.3 bits (142), Expect = 6e-10
Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 3/129 (2%)
Frame = +2
Query: 254 QHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNK 433
QH A L+ V+L G LL++A+ I G+HP I +GFD+A K
Sbjct: 85 QHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKK 144
Query: 434 SLEVLESM--KIPIEIARENLVDVARTHSKLRSTQAWADVLTDACVDAVLTIR-TPGKPV 604
+LE L+S+ K P+E RE LV+ A+T + + VDAVL++ K V
Sbjct: 145 ALETLDSISDKFPVE-NRERLVETAQTSLGSKIVNRSLRQFAEIAVDAVLSVADIESKDV 203
Query: 605 DLHMGEIMG 631
+ M ++ G
Sbjct: 204 NFEMIKMEG 212
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/52 (40%), Positives = 36/52 (69%)
Frame = +3
Query: 99 QALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQI 254
+A+ +I AA+ + + ++T+LGP+G KMLVS GD+ IT DG ++ +M +
Sbjct: 33 EAVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDV 84
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 55.2 bits (127), Expect = 4e-08
Identities = 23/47 (48%), Positives = 34/47 (72%)
Frame = +3
Query: 114 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQI 254
NI AAK + D ++T+LGP+G KM+ SG GD+ IT DG +L++M +
Sbjct: 36 NIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSV 82
Score = 52.0 bits (119), Expect = 4e-07
Identities = 31/112 (27%), Positives = 56/112 (50%), Gaps = 3/112 (2%)
Frame = +2
Query: 257 HPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKS 436
HPTA ++ V++ G LL A +S+G+HP I+E F A ++
Sbjct: 84 HPTAKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSAAAEA 143
Query: 437 LEVLESMKIPIEIARENLVDVART---HSKLRSTQAWADVLTDACVDAVLTI 583
++L+ M P++++ + L++ T +SK+ S +W +L V+AV I
Sbjct: 144 EKILDEMSSPVDLSNDALLNKMATTSLNSKVVSQHSW--LLAPMAVNAVKKI 193
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 55.2 bits (127), Expect = 4e-08
Identities = 23/47 (48%), Positives = 34/47 (72%)
Frame = +3
Query: 114 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQI 254
NI AAK + D ++T+LGP+G KM+ SG GD+ IT DG +L++M +
Sbjct: 36 NIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSV 82
Score = 52.0 bits (119), Expect = 4e-07
Identities = 31/112 (27%), Positives = 56/112 (50%), Gaps = 3/112 (2%)
Frame = +2
Query: 257 HPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKS 436
HPTA ++ V++ G LL A +S+G+HP I+E F A ++
Sbjct: 84 HPTAKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSAAAEA 143
Query: 437 LEVLESMKIPIEIARENLVDVART---HSKLRSTQAWADVLTDACVDAVLTI 583
++L+ M P++++ + L++ T +SK+ S +W +L V+AV I
Sbjct: 144 EKILDEMSSPVDLSNDALLNKMATTSLNSKVVSQHSW--LLAPMAVNAVKKI 193
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 51.2 bits (117), Expect = 6e-07
Identities = 22/47 (46%), Positives = 33/47 (70%)
Frame = +3
Query: 114 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQI 254
NI+A K I DV++T+LGP+ +KML+ G I +T DGN +L E+ +
Sbjct: 28 NINACKTIADVIRTSLGPRAMLKMLMDPMGGIVMTNDGNAILREITV 74
Score = 33.5 bits (73), Expect = 0.14
Identities = 21/113 (18%), Positives = 46/113 (40%), Gaps = 2/113 (1%)
Frame = +2
Query: 254 QHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNK 433
+HP A + ++L GE++ A ++ + HP +I + + A
Sbjct: 75 KHPAAKSMIEIARTQDEETGDGTTSVIILAGEVMAHAQTYLEQKTHPTLIIKAYRQALED 134
Query: 434 SLEVLES-MKIPIEIARE-NLVDVARTHSKLRSTQAWADVLTDACVDAVLTIR 586
++ E+ ++I + + V ++ + W D+ + + AV TIR
Sbjct: 135 MIQWSENKFSKTVDITDDAEIAKVVKSCLGTKMISKWMDLAVNISIQAVKTIR 187
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 48.0 bits (109), Expect = 6e-06
Identities = 19/47 (40%), Positives = 33/47 (70%)
Frame = +3
Query: 114 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQI 254
N++AA I +++K++LGP G KMLV GD+ +T DG +L ++++
Sbjct: 25 NVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEV 71
Score = 43.6 bits (98), Expect = 1e-04
Identities = 26/113 (23%), Positives = 53/113 (46%), Gaps = 2/113 (1%)
Frame = +2
Query: 254 QHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNK 433
+HP ++ V++ ELLK+AD + + +HP I G+ +A +
Sbjct: 72 EHPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRLACKE 131
Query: 434 SLE-VLESMKIPIE-IARENLVDVARTHSKLRSTQAWADVLTDACVDAVLTIR 586
+++ + E++ + I R+++V+ A+T + AD + VDA +R
Sbjct: 132 AVKYISENISFTSDSIGRQSVVNAAKTSMSSKIIGPDADFFGELVVDAAEAVR 184
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 48.0 bits (109), Expect = 6e-06
Identities = 19/47 (40%), Positives = 33/47 (70%)
Frame = +3
Query: 114 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQI 254
N++AA I +++K++LGP G KMLV GD+ +T DG +L ++++
Sbjct: 25 NVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEV 71
Score = 43.6 bits (98), Expect = 1e-04
Identities = 26/113 (23%), Positives = 53/113 (46%), Gaps = 2/113 (1%)
Frame = +2
Query: 254 QHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNK 433
+HP ++ V++ ELLK+AD + + +HP I G+ +A +
Sbjct: 72 EHPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRLACKE 131
Query: 434 SLE-VLESMKIPIE-IARENLVDVARTHSKLRSTQAWADVLTDACVDAVLTIR 586
+++ + E++ + I R+++V+ A+T + AD + VDA +R
Sbjct: 132 AVKYISENISFTSDSIGRQSVVNAAKTSMSSKIIGPDADFFGELVVDAAEAVR 184
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 46.4 bits (105), Expect = 2e-05
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Frame = +3
Query: 48 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSG----AGDIKI 215
M + +L A+ R A + A I D++K+ LGPKG K+L+SG AG IK+
Sbjct: 1 MLPVQILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKV 60
Query: 216 TKDGNVLLHEMQI 254
T DG +L + +
Sbjct: 61 TNDGATILKSIGV 73
Score = 41.9 bits (94), Expect = 4e-04
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
Frame = +2
Query: 335 LLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPI-EIARENLVDVARTH 511
+L ELLK+A+ +++ +HP+ I G+ A + E L+ I + R++L+ +ART
Sbjct: 101 VLAAELLKEAEKLVNQRIHPQTIISGYRRALGIAQESLKKSSIESGDNIRDDLLKIARTT 160
Query: 512 SKLRSTQAWADVLTDACVDAVLTIRTPGKPVDLHMGEIMGDETQDGY 652
+ + VDAVL ++ G + + + +G + Y
Sbjct: 161 LGSKILSQHKEHFAQLAVDAVLRLKGSGNLDAIQIIKKLGGSMNESY 207
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 46.4 bits (105), Expect = 2e-05
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Frame = +3
Query: 48 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSG----AGDIKI 215
M + +L A+ R A + A I D++K+ LGPKG K+L+SG AG IK+
Sbjct: 1 MLPVQILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKV 60
Query: 216 TKDGNVLLHEMQI 254
T DG +L + +
Sbjct: 61 TNDGATILKSIGV 73
Score = 41.9 bits (94), Expect = 4e-04
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
Frame = +2
Query: 335 LLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPI-EIARENLVDVARTH 511
+L ELLK+A+ +++ +HP+ I G+ A + E L+ I + R++L+ +ART
Sbjct: 101 VLAAELLKEAEKLVNQRIHPQTIISGYRRALGIAQESLKKSSIESGDNIRDDLLKIARTT 160
Query: 512 SKLRSTQAWADVLTDACVDAVLTIRTPGKPVDLHMGEIMGDETQDGY 652
+ + VDAVL ++ G + + + +G + Y
Sbjct: 161 LGSKILSQHKEHFAQLAVDAVLRLKGSGNLDAIQIIKKLGGSMNESY 207
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 46.4 bits (105), Expect = 2e-05
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Frame = +3
Query: 48 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSG----AGDIKI 215
M + +L A+ R A + A I D++K+ LGPKG K+L+SG AG IK+
Sbjct: 1 MLPVQILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKV 60
Query: 216 TKDGNVLLHEMQI 254
T DG +L + +
Sbjct: 61 TNDGATILKSIGV 73
Score = 41.9 bits (94), Expect = 4e-04
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
Frame = +2
Query: 335 LLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPI-EIARENLVDVARTH 511
+L ELLK+A+ +++ +HP+ I G+ A + E L+ I + R++L+ +ART
Sbjct: 101 VLAAELLKEAEKLVNQRIHPQTIISGYRRALGIAQESLKKSSIESGDNIRDDLLKIARTT 160
Query: 512 SKLRSTQAWADVLTDACVDAVLTIRTPGKPVDLHMGEIMGDETQDGY 652
+ + VDAVL ++ G + + + +G + Y
Sbjct: 161 LGSKILSQHKEHFAQLAVDAVLRLKGSGNLDAIQIIKKLGGSMNESY 207
>AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical
protein T10B5.5b protein.
Length = 455
Score = 40.3 bits (90), Expect = 0.001
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Frame = +2
Query: 332 VLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPIE---IARENLVDVA 502
V+L E+LKQ FI +G+HP+++ A K+L+ L ++I I RE LV A
Sbjct: 98 VVLAAEILKQMKPFIEDGVHPQLLIRAIGKACEKTLKNLADLEIKINGETELREMLVKCA 157
Query: 503 RT--HSKLRSTQA--WADVLTDA--CVDAVLTIRTPG 595
T SKL S + +A+++ DA +DA L + G
Sbjct: 158 ATTLSSKLVSQERLFFANMIVDAVNTLDAHLPLNMIG 194
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/66 (31%), Positives = 34/66 (51%)
Frame = +3
Query: 57 ISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVL 236
I LL E + + NI+A + + D ++T LGP+G K++V G I+ DG +
Sbjct: 6 IILLKDGTENKQGKGQIISNINACQVVADSIRTTLGPRGLDKLIVDSKGATTISNDGATI 65
Query: 237 LHEMQI 254
L + I
Sbjct: 66 LKLLDI 71
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 40.3 bits (90), Expect = 0.001
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Frame = +2
Query: 332 VLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPIE---IARENLVDVA 502
V+L E+LKQ FI +G+HP+++ A K+L+ L ++I I RE LV A
Sbjct: 98 VVLAAEILKQMKPFIEDGVHPQLLIRAIGKACEKTLKNLADLEIKINGETELREMLVKCA 157
Query: 503 RT--HSKLRSTQA--WADVLTDA--CVDAVLTIRTPG 595
T SKL S + +A+++ DA +DA L + G
Sbjct: 158 ATTLSSKLVSQERLFFANMIVDAVNTLDAHLPLNMIG 194
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/66 (31%), Positives = 34/66 (51%)
Frame = +3
Query: 57 ISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVL 236
I LL E + + NI+A + + D ++T LGP+G K++V G I+ DG +
Sbjct: 6 IILLKDGTENKQGKGQIISNINACQVVADSIRTTLGPRGLDKLIVDSKGATTISNDGATI 65
Query: 237 LHEMQI 254
L + I
Sbjct: 66 LKLLDI 71
>L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein.
Length = 568
Score = 30.7 bits (66), Expect = 0.98
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +3
Query: 87 ARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDG 227
A QA+ V ++ + D + +GPKG ++ G KITKDG
Sbjct: 25 AEGRQAMLVGVNL---LADAVSVTMGPKGRNVIIEQSWGSPKITKDG 68
>AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock
protein protein 60 protein.
Length = 568
Score = 30.7 bits (66), Expect = 0.98
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +3
Query: 87 ARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDG 227
A QA+ V ++ + D + +GPKG ++ G KITKDG
Sbjct: 25 AEGRQAMLVGVNL---LADAVSVTMGPKGRNVIIEQSWGSPKITKDG 68
>Z50795-6|CAD59152.2| 707|Caenorhabditis elegans Hypothetical
protein R166.5b protein.
Length = 707
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = -3
Query: 486 FSRAISIGIFIDSKTSNDLLRAMSKPSVMILGCKPSLMNMSACLSSSPMRR 334
F R S+GI I+ S + +S+ S PS++N+S L+ SP++R
Sbjct: 575 FPRKKSVGIAIEKSRSGEFTPPISRASPTTP--PPSMLNLSEDLTDSPVKR 623
>Z50795-5|CAA90665.2| 705|Caenorhabditis elegans Hypothetical
protein R166.5a protein.
Length = 705
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = -3
Query: 486 FSRAISIGIFIDSKTSNDLLRAMSKPSVMILGCKPSLMNMSACLSSSPMRR 334
F R S+GI I+ S + +S+ S PS++N+S L+ SP++R
Sbjct: 573 FPRKKSVGIAIEKSRSGEFTPPISRASPTTP--PPSMLNLSEDLTDSPVKR 621
>U41110-1|AAA82415.1| 506|Caenorhabditis elegans Hypothetical
protein ZK682.2 protein.
Length = 506
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 458 KIPIEIARENLVDVARTHSKLRST 529
K PIE+ARE L+D ++ LR T
Sbjct: 480 KAPIEVAREELIDSSKLDDSLRIT 503
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,073,842
Number of Sequences: 27780
Number of extensions: 270112
Number of successful extensions: 655
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 647
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -