Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0531
(357 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 37 8e-04
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 36 0.001
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 33 0.013
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 32 0.023
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 32 0.030
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 29 0.16
SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyce... 29 0.16
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 29 0.21
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 28 0.37
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 28 0.37
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 28 0.49
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 27 0.65
SPAC57A10.11c |tim40||TIM22 inner membrane protein import comple... 27 1.1
SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha su... 27 1.1
SPBC31A8.01c |cwl1|rtn1, SPBC651.13c|reticulon-like protein|Schi... 25 2.6
SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar ... 24 8.0
SPAC13G7.06 |met16||phosphoadenosine phosphosulfate reductase|Sc... 24 8.0
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 37.1 bits (82), Expect = 8e-04
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +1
Query: 262 NLRAHLRIHTNERPFKCSGCXEGF 333
NL++H+ HTN RPF+CS C + F
Sbjct: 586 NLKSHMNTHTNYRPFQCSICKKSF 609
Score = 30.7 bits (66), Expect = 0.070
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 182 LQNHLRHHRAERRFVCAFCNKAFSRQ 259
L++H+ H R F C+ C K+F+RQ
Sbjct: 587 LKSHMNTHTNYRPFQCSICKKSFARQ 612
Score = 23.8 bits (49), Expect = 8.0
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +2
Query: 185 QNHLRHHRAERRFVCAFCNKAFSR 256
+ H + H + F C CN+ F+R
Sbjct: 616 RRHEQLHTGIKAFACVTCNQRFAR 639
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 36.3 bits (80), Expect = 0.001
Identities = 15/26 (57%), Positives = 18/26 (69%), Gaps = 2/26 (7%)
Frame = +1
Query: 265 LRAHLRIHTNERPFKC--SGCXEGFY 336
L HLR H+NERPF C +GC + FY
Sbjct: 40 LEQHLRTHSNERPFVCDYTGCSKAFY 65
Score = 34.3 bits (75), Expect = 0.006
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = +1
Query: 250 FPSNNLRAHLRIHTNERPFKC--SGCXEGFYT 339
+ ++L+ H R HTN +PF C GC FYT
Sbjct: 65 YRKSHLKIHKRCHTNVKPFSCHYDGCDAQFYT 96
Score = 32.3 bits (70), Expect = 0.023
Identities = 15/28 (53%), Positives = 19/28 (67%), Gaps = 2/28 (7%)
Frame = +2
Query: 182 LQNHLRHHRAERRFVCAF--CNKAFSRQ 259
L+ HLR H ER FVC + C+KAF R+
Sbjct: 40 LEQHLRTHSNERPFVCDYTGCSKAFYRK 67
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 33.1 bits (72), Expect = 0.013
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 182 LQNHLRHHRAERRFVCAFCNKAFSRQII*GR 274
L+ H R H + F C+FCN+AF+R + R
Sbjct: 43 LRRHERTHENVKAFSCSFCNRAFARSDVLNR 73
Score = 28.3 bits (60), Expect = 0.37
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +1
Query: 262 NLRAHLRIHTNERPFKCSGCXEGF 333
+LR H R H N + F CS C F
Sbjct: 42 HLRRHERTHENVKAFSCSFCNRAF 65
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 32.3 bits (70), Expect = 0.023
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +1
Query: 262 NLRAHLRIHTNERPFKCS 315
+L+ H+R HTNE+PF CS
Sbjct: 84 HLKRHIRSHTNEKPFTCS 101
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 31.9 bits (69), Expect = 0.030
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +1
Query: 262 NLRAHLRIHTNERPFKCSGCXEGF 333
N+ +H++ H ++RP++C C GF
Sbjct: 459 NVESHIQTHLSDRPYRCDLCKAGF 482
Score = 29.5 bits (63), Expect = 0.16
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +1
Query: 259 NNLRAHLRIHTNERPFKCSGCXEGF 333
++L+ HLRIH N RP+ C C + F
Sbjct: 486 HDLKRHLRIHENGRPYVCE-CLKRF 509
Score = 25.0 bits (52), Expect = 3.5
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 182 LQNHLRHHRAERRFVCAFCNKAFSR 256
L+ HLR H R +VC C K F+R
Sbjct: 488 LKRHLRIHENGRPYVCE-CLKRFNR 511
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 29.5 bits (63), Expect = 0.16
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +1
Query: 265 LRAHLRIHTNERPFKCS 315
L AHLR HT E+PF CS
Sbjct: 93 LVAHLRSHTGEKPFICS 109
Score = 27.5 bits (58), Expect = 0.65
Identities = 10/24 (41%), Positives = 17/24 (70%), Gaps = 2/24 (8%)
Frame = +2
Query: 191 HLRHHRAERRFVCAF--CNKAFSR 256
HLR H E+ F+C+ C+++F+R
Sbjct: 96 HLRSHTGEKPFICSVPECDRSFTR 119
>SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 604
Score = 29.5 bits (63), Expect = 0.16
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +3
Query: 120 EKAVQNNTIHHSPQMMRXMHSCRTTYVTIVPRDDSSVPSVIKRFPVK 260
+ V N++ H +P+ R +S R+ Y + P SSV S R PV+
Sbjct: 101 DDVVTNSSSHRTPRHHRRSYSPRSDYGSRSPSPHSSVDSHQSRSPVR 147
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 29.1 bits (62), Expect = 0.21
Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Frame = +1
Query: 259 NNLRAHLRIHTNERPFKC--SGCXEGF 333
++L+ H HT ERPF C +GC + F
Sbjct: 481 SSLKIHTYSHTGERPFVCDYAGCGKAF 507
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 28.3 bits (60), Expect = 0.37
Identities = 11/20 (55%), Positives = 16/20 (80%), Gaps = 1/20 (5%)
Frame = +1
Query: 256 SNNLRAHLR-IHTNERPFKC 312
S +LR H+R +HT+E+PF C
Sbjct: 435 SEHLRRHIRSLHTSEKPFVC 454
Score = 27.5 bits (58), Expect = 0.65
Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +2
Query: 182 LQNHLRH-HRAERRFVCAFCNKAFSRQ 259
L+ H+R H +E+ FVC C K FSR+
Sbjct: 438 LRRHIRSLHTSEKPFVC-ICGKRFSRR 463
Score = 24.6 bits (51), Expect = 4.6
Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = +1
Query: 259 NNLRAHLRIHTNERP-FKCSGCXEGFYT 339
+NLR H R+H N P C G+Y+
Sbjct: 464 DNLRQHERLHVNASPRLACFFQPSGYYS 491
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 28.3 bits (60), Expect = 0.37
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +1
Query: 274 HLRIHTNERPFKCS 315
H+R HT E+PF+CS
Sbjct: 22 HIRSHTGEKPFECS 35
Score = 26.6 bits (56), Expect = 1.1
Identities = 10/25 (40%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
Frame = +2
Query: 191 HLRHHRAERRFVCAF--CNKAFSRQ 259
H+R H E+ F C++ C K F+R+
Sbjct: 22 HIRSHTGEKPFECSYPSCKKRFTRR 46
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 27.9 bits (59), Expect = 0.49
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = +2
Query: 185 QNHLRHHRAERRFVCAFCNKAFSRQII*GR 274
+ H R H + F+C C+ +F+R + R
Sbjct: 35 RRHFRSHTNSKAFICPHCSSSFTRSDVLNR 64
Score = 27.5 bits (58), Expect = 0.65
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +1
Query: 268 RAHLRIHTNERPFKCSGCXEGF 333
R H R HTN + F C C F
Sbjct: 35 RRHFRSHTNSKAFICPHCSSSF 56
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 27.5 bits (58), Expect = 0.65
Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Frame = +2
Query: 191 HLRHHRAERRFVCAF--CNKAFSR-QII*GRIFVSTQMRGRSNVADAXKA 331
H+R H E+ VC F C K FSR + + T R N A A A
Sbjct: 44 HIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHTNANSRRNAAAAAAA 93
Score = 25.8 bits (54), Expect = 2.0
Identities = 10/22 (45%), Positives = 14/22 (63%), Gaps = 2/22 (9%)
Frame = +1
Query: 274 HLRIHTNERPFKCS--GCXEGF 333
H+R HT E+P C+ GC + F
Sbjct: 44 HIRTHTGEKPHVCTFPGCAKRF 65
>SPAC57A10.11c |tim40||TIM22 inner membrane protein import complex
subunit Tim40|Schizosaccharomyces pombe|chr 1|||Manual
Length = 313
Score = 26.6 bits (56), Expect = 1.1
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +2
Query: 77 ACFKCQPLVPEVSIGESSTEQHNTSQ--STNDEXNAQLQN 190
ACF+ P + + +GES E T++ ST + N Q Q+
Sbjct: 242 ACFQKHPEIYQDMVGESEEEDAETNEKPSTTSDENNQPQS 281
>SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha
subunit Tfa1 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 448
Score = 26.6 bits (56), Expect = 1.1
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +2
Query: 182 LQNHLRHHRAERRFVCAFCNKAFS 253
+++ +R+ + +VC FCNK FS
Sbjct: 123 VEDRMRNDFDSKGYVCPFCNKKFS 146
>SPBC31A8.01c |cwl1|rtn1, SPBC651.13c|reticulon-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 308
Score = 25.4 bits (53), Expect = 2.6
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2
Query: 113 SIGESSTEQHNTSQSTNDEXNA 178
+I SS+E H+TSQST E ++
Sbjct: 65 NISSSSSEPHHTSQSTPGETSS 86
>SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar
membrane transporter Hmt1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 830
Score = 23.8 bits (49), Expect = 8.0
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = -2
Query: 275 CALKLFDGKTLYYRRHRRIVSRHDGDVSGSATVHSSHHLWTVMYCVVLYCFLQWTLQVL 99
C + LF G+ + R++ G ++ T HS W+ + V+Y FLQ + V+
Sbjct: 268 CIVLLFLGRAVNILAPRQL-----GVLTEKLTKHSEKIPWSDVILFVIYRFLQGNMGVI 321
>SPAC13G7.06 |met16||phosphoadenosine phosphosulfate
reductase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 266
Score = 23.8 bits (49), Expect = 8.0
Identities = 7/23 (30%), Positives = 13/23 (56%)
Frame = +3
Query: 138 NTIHHSPQMMRXMHSCRTTYVTI 206
NT+HH P+ + + +T Y +
Sbjct: 78 NTLHHFPETLDLLEKVKTKYPNV 100
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,448,012
Number of Sequences: 5004
Number of extensions: 27146
Number of successful extensions: 104
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 103
length of database: 2,362,478
effective HSP length: 65
effective length of database: 2,037,218
effective search space used: 107972554
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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