Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0528
(738 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 75 1e-14
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 73 4e-14
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 71 2e-13
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 71 2e-13
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 69 5e-13
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 65 9e-12
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 64 2e-11
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 58 2e-09
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 46 7e-06
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 38 0.001
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 33 0.042
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 33 0.056
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 32 0.074
SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces ... 29 0.52
SPAC3A12.05c |taf2||TATA-binding protein associated factor Taf2|... 28 1.2
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 28 1.6
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 26 4.9
SPBC16C6.06 |pep1|vps10|sorting receptor for CPY|Schizosaccharom... 26 4.9
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 26 6.4
SPAC6B12.02c |mus7||DNA repair protein Mus7|Schizosaccharomyces ... 25 8.5
SPAC12G12.09 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 25 8.5
SPCC613.07 |||zf-HIT|Schizosaccharomyces pombe|chr 3|||Manual 25 8.5
SPBC21C3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 25 8.5
SPBC32H8.02c |nep2|mug120|nedd8 protease Nep2|Schizosaccharomyce... 25 8.5
SPBC1604.17c |||conserved fungal protein|Schizosaccharomyces pom... 25 8.5
SPBC3F6.03 |trr1|caf4|thioredoxin reductase Trr1|Schizosaccharom... 25 8.5
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 74.9 bits (176), Expect = 1e-14
Identities = 35/85 (41%), Positives = 54/85 (63%)
Frame = +2
Query: 254 NGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGMERIASVT 433
+GVGK+S+ +++N F + D +AT+G D K V DK V LQLWDT G ER S+
Sbjct: 17 SGVGKTSIMNQYVNRKF--SKDYKATIGADFLTKEVLVDDKVVTLQLWDTAGQERFQSLG 74
Query: 434 SSYYKFAEAAILVFSLDNASSFHIL 508
++Y+ A+ +LV+ ++N+ SF L
Sbjct: 75 VAFYRGADCCVLVYDVNNSKSFETL 99
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 72.9 bits (171), Expect = 4e-14
Identities = 37/99 (37%), Positives = 62/99 (62%)
Frame = +2
Query: 254 NGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGMERIASVT 433
+GVGK+ L +F+N F + + +AT+G D K V DK V LQLWDT G ER S+
Sbjct: 17 SGVGKTCLMNQFVNQKF--SREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQERFQSLG 74
Query: 434 SSYYKFAEAAILVFSLDNASSFHILVNIYLKLYLMQKTQ 550
++Y+ A+ ++V++++N+ SF + N + + +L Q +Q
Sbjct: 75 MAFYRGADCCVIVYNVNNSKSFDSVEN-WRQEFLYQTSQ 112
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 70.9 bits (166), Expect = 2e-13
Identities = 33/83 (39%), Positives = 54/83 (65%)
Frame = +2
Query: 254 NGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGMERIASVT 433
+GVGKS L RF ++T+ + +T+G+D + +++ K VKLQ+WDT G ER ++T
Sbjct: 17 SGVGKSCLLLRFADDTYTESYI--STIGVDFKIRTFELEGKTVKLQIWDTAGQERFRTIT 74
Query: 434 SSYYKFAEAAILVFSLDNASSFH 502
SSYY+ A I+V+ + + SF+
Sbjct: 75 SSYYRGAHGIIIVYDVTDQDSFN 97
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 70.9 bits (166), Expect = 2e-13
Identities = 32/82 (39%), Positives = 53/82 (64%)
Frame = +2
Query: 254 NGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGMERIASVT 433
+GVGKS+L RF N F N + ++T+G++ + + +K +K Q+WDT G ER ++T
Sbjct: 19 SGVGKSNLLMRFTRNEF--NIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQERYRAIT 76
Query: 434 SSYYKFAEAAILVFSLDNASSF 499
S+YY+ A A++V+ + SSF
Sbjct: 77 SAYYRGAVGALIVYDITKQSSF 98
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 69.3 bits (162), Expect = 5e-13
Identities = 34/86 (39%), Positives = 53/86 (61%)
Frame = +2
Query: 242 FVW*NGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGMERI 421
F+ VGK+SL RF+ + F ++ +AT+G+D K + D+ V+LQLWDT G ER
Sbjct: 16 FLGEQSVGKTSLITRFMYDQF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERF 73
Query: 422 ASVTSSYYKFAEAAILVFSLDNASSF 499
S+ SY + + AI+V+ + N +SF
Sbjct: 74 RSLIPSYIRDSSVAIIVYDITNHNSF 99
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 65.3 bits (152), Expect = 9e-12
Identities = 30/82 (36%), Positives = 51/82 (62%)
Frame = +2
Query: 254 NGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGMERIASVT 433
+GVGKS L RF ++F P+ T+G+D + ++ K +KLQ+WDT G ER ++T
Sbjct: 18 SGVGKSCLLLRFSEDSFTPSFI--TTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTIT 75
Query: 434 SSYYKFAEAAILVFSLDNASSF 499
++YY+ A +L++ + + SF
Sbjct: 76 TAYYRGAMGILLLYDVTDKKSF 97
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 64.1 bits (149), Expect = 2e-11
Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Frame = +2
Query: 254 NGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVA----DKDVKLQLWDTGGMERI 421
+G GKS L +RF+ N + + T+G+D ++ V K +KLQ+WDT G E+
Sbjct: 18 SGTGKSCLLQRFVKNQW--DDQVSHTVGIDFASRIISVGMGNQQKRIKLQIWDTAGQEKF 75
Query: 422 ASVTSSYYKFAEAAILVFSLDNASSFHIL 508
SV +YY+ A A+LV+ + N SF L
Sbjct: 76 RSVARNYYRGAAGAVLVYDVTNKDSFEEL 104
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 57.6 bits (133), Expect = 2e-09
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +2
Query: 254 NGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADK-DVKLQLWDTGGMERIASV 430
+ VGKSSL RF+ + F + R +T+G + + + VKL++WDT G ER S+
Sbjct: 23 SAVGKSSLVLRFVKDQF--DDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQERYKSL 80
Query: 431 TSSYYKFAEAAILVFSLDNASS 496
YY+ A AI+V+ + A+S
Sbjct: 81 APMYYRNANCAIVVYDITQAAS 102
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 45.6 bits (103), Expect = 7e-06
Identities = 25/109 (22%), Positives = 49/109 (44%)
Frame = +2
Query: 221 NSCIESNFVW*NGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWD 400
N I+ + + +GK+SL ++ +F S + TLG++ EK + + ++ +WD
Sbjct: 8 NVTIKVGMIGDSSIGKTSLMVTYVQGSFDEESTQ--TLGVNFMEKTISIRNTEITFSIWD 65
Query: 401 TGGMERIASVTSSYYKFAEAAILVFSLDNASSFHILVNIYLKLYLMQKT 547
GG ++ A A + +F L S+ + + Y + KT
Sbjct: 66 LGGQREFVNMLPMVCNDAVAILFMFDLSRKSTLNSIKEWYRQARGFNKT 114
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 38.3 bits (85), Expect = 0.001
Identities = 18/81 (22%), Positives = 38/81 (46%)
Frame = +2
Query: 257 GVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGMERIASVTS 436
G GK++ +R + F ATLG++ + ++ +WDT G E++ +
Sbjct: 19 GTGKTTFVKRHLTGEF--EKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQEKLGGLRD 76
Query: 437 SYYKFAEAAILVFSLDNASSF 499
YY + I++F + + ++
Sbjct: 77 GYYIQGQCGIIMFDVTSRITY 97
Score = 25.8 bits (54), Expect = 6.4
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1
Query: 523 EIVSYAENAKIFLCGNKSDLE 585
++V EN I LCGNK D++
Sbjct: 106 DLVRVCENIPIVLCGNKVDVK 126
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 33.1 bits (72), Expect = 0.042
Identities = 22/83 (26%), Positives = 42/83 (50%)
Frame = +2
Query: 260 VGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGMERIASVTSS 439
VGKSSL +++ N FV T+ + F K + ++ ++ DT G + + + S
Sbjct: 17 VGKSSLTVQYVENHFV--ESYYPTIE-NTFSKNIKYKGQEFATEIIDTAGQDEYSILNSK 73
Query: 440 YYKFAEAAILVFSLDNASSFHIL 508
+ +LV+S+ + SSF ++
Sbjct: 74 HSIGIHGYVLVYSITSKSSFEMV 96
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 32.7 bits (71), Expect = 0.056
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Frame = +2
Query: 257 GVGKSSLFRRFINNTFVPNSDRRATLGLDHF--EKLYQVADKDVKLQLWDTGGMERIASV 430
G GK+ L F + TF +R +++ + Y K ++L LWDT G E +
Sbjct: 24 GCGKTCLLIVFSSGTF---PERYVPTVFENYITDITYGPNSKVIELALWDTAGQEEYDRL 80
Query: 431 TSSYYKFAEAAILVFSLDNASSFH 502
Y + +L FS+D +S +
Sbjct: 81 RPLSYPNSNVILLCFSIDCPASLN 104
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 32.3 bits (70), Expect = 0.074
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +2
Query: 365 VADKDVKLQLWDTGGMERIASVTSSYYKFAEAAILVFSLDNASSFHI 505
V K++K +WD GG ++I + Y+ + L+F +D+A S I
Sbjct: 60 VTYKNIKFNVWDVGGQDKIRPLWRHYFTGTKG--LIFVVDSADSNRI 104
>SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 308
Score = 29.5 bits (63), Expect = 0.52
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +2
Query: 254 NGVGKSSLFRRFINNTFVPNSDRR--ATLGLDHFEKLYQVADKDVKLQLWDTGGME 415
+G GKSS+ R + + +V RR AT+ ++H + ++ L LWD GG E
Sbjct: 11 SGSGKSSM-RSIVFSNYVAKDTRRLGATIDIEHSHVRFL---GNLVLNLWDCGGQE 62
>SPAC3A12.05c |taf2||TATA-binding protein associated factor
Taf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1174
Score = 28.3 bits (60), Expect = 1.2
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = -2
Query: 515 C*PKYETMKHCPVKRPKLQLQQIYNSLMSPKLFFPYLQ 402
C P ++ + C + KL+L Q ++ PK PY Q
Sbjct: 917 CMPSFKNIITCKSLKAKLRLAQTFHLEFGPKELLPYTQ 954
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 27.9 bits (59), Expect = 1.6
Identities = 12/37 (32%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +2
Query: 380 VKLQLWDTGGMERIASVTSSYYKFAEAAI-LVFSLDN 487
++ +WD GG + + + +Y++ EA I +V SLD+
Sbjct: 60 LRFTIWDIGGQKTLRNFWKNYFESTEAIIWVVDSLDD 96
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 26.2 bits (55), Expect = 4.9
Identities = 8/33 (24%), Positives = 18/33 (54%)
Frame = +2
Query: 374 KDVKLQLWDTGGMERIASVTSSYYKFAEAAILV 472
+++ +WD GG ++I + Y++ + I V
Sbjct: 59 RNISFTVWDVGGQDKIRPLWRHYFQNTQGIIFV 91
>SPBC16C6.06 |pep1|vps10|sorting receptor for CPY|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1466
Score = 26.2 bits (55), Expect = 4.9
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 352 EVVPSCGQRCQVAVMGYWRYGKNSFGD 432
++VP CG+ C + + GY +N F D
Sbjct: 1058 KIVPKCGKNCYLHLHGYTE--RNQFSD 1082
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 25.8 bits (54), Expect = 6.4
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -2
Query: 725 VEGNIGKHSSIPLPVFA*SFVCANLLNCGH-CSQKVSISASVT 600
++G+ K S P+P +C LL+CGH C K + + T
Sbjct: 460 LKGHERKSCSDPIPTC--ENICGKLLSCGHRCKYKCHLGSCGT 500
>SPAC6B12.02c |mus7||DNA repair protein Mus7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1888
Score = 25.4 bits (53), Expect = 8.5
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 252 ETVLERVHYFAGSLTIPLFQTL 317
ETVLE + YF S T+ L+ L
Sbjct: 735 ETVLENLPYFTNSETVDLYNLL 756
>SPAC12G12.09 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 977
Score = 25.4 bits (53), Expect = 8.5
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +2
Query: 473 FSLDNASSFHILVNIYLKLYLMQKTQRYFYVEINLI 580
+SLD+ SS H+L I++ L+ K ++ + + L+
Sbjct: 869 YSLDDCSSIHLLAFIHVLSKLIIKEEQLSFSRLQLL 904
>SPCC613.07 |||zf-HIT|Schizosaccharomyces pombe|chr 3|||Manual
Length = 345
Score = 25.4 bits (53), Expect = 8.5
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 266 KSSLFRRFINNTFVPNSDRRATLGLDHFEK 355
K SL R IN F P S+++ L H++K
Sbjct: 98 KRSLERAGINIKFAPPSNKKRRLNRTHYDK 127
>SPBC21C3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 841
Score = 25.4 bits (53), Expect = 8.5
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +3
Query: 264 ERVHYFAGSLTIPLFQTLIE 323
ER+H+F + IP FQ +++
Sbjct: 139 ERIHFFIVDVLIPFFQRVVQ 158
>SPBC32H8.02c |nep2|mug120|nedd8 protease Nep2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 415
Score = 25.4 bits (53), Expect = 8.5
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -2
Query: 503 YETM-KHCPVKRPKLQLQQIYNSLMSPKLFFPYLQYP 396
YE M + +KRPK + QQIY L+ P + F Q P
Sbjct: 101 YEIMLRQVLLKRPKEESQQIY--LLRPAMVFFLAQAP 135
>SPBC1604.17c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 459
Score = 25.4 bits (53), Expect = 8.5
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = -1
Query: 246 TKLLSIQEFLQQPYFVSFLLLIISVARH*LRNTFYKYHN 130
TKLL I + + V L+ ++ +R+ +R ++HN
Sbjct: 382 TKLLEIYSYRISAHHVELLMALVVCSRNYMRCNLQEHHN 420
>SPBC3F6.03 |trr1|caf4|thioredoxin reductase
Trr1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 25.4 bits (53), Expect = 8.5
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +1
Query: 325 GDFRFRSFREVVPSCGQRCQVAVM 396
GD + + FR+ + S G CQ A++
Sbjct: 287 GDVQDKVFRQAITSAGSGCQAALL 310
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,083,685
Number of Sequences: 5004
Number of extensions: 65154
Number of successful extensions: 188
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 183
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 349251756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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