Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0528
(738 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family pr... 77 2e-14
AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein. 77 2e-14
AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical ... 75 7e-14
Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical pr... 74 1e-13
U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family prot... 73 2e-13
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 72 5e-13
Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical pr... 71 7e-13
AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical ... 71 9e-13
U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family prot... 71 1e-12
U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like prot... 71 1e-12
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 70 2e-12
AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family pr... 69 3e-12
Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical pr... 69 3e-12
U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein. 68 6e-12
AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family pr... 68 6e-12
AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein. 68 6e-12
Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical pr... 67 1e-11
U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated p... 67 1e-11
U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like prot... 67 1e-11
AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family pr... 67 1e-11
Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical pr... 66 2e-11
U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical pr... 66 3e-11
U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein. 63 2e-10
U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein. 63 2e-10
U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family pro... 63 2e-10
U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family pro... 63 2e-10
AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein. 63 2e-10
AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical ... 63 2e-10
AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical ... 63 2e-10
Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical p... 62 3e-10
DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GL... 62 3e-10
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 62 4e-10
Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical pr... 62 5e-10
Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical pr... 61 9e-10
AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical ... 57 1e-08
AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein. 57 1e-08
Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical p... 57 1e-08
AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family pr... 57 1e-08
Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical pr... 56 2e-08
Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical pr... 54 1e-07
Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical p... 50 1e-06
Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical pr... 50 1e-06
U68260-1|AAB16975.1| 69|Caenorhabditis elegans rab19-like prot... 46 2e-05
AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical ... 46 3e-05
U68254-1|AAB16969.1| 67|Caenorhabditis elegans rab6-like protein. 45 6e-05
U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein. 45 6e-05
U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein. 44 1e-04
AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-rela... 44 1e-04
Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical pr... 42 5e-04
U68259-1|AAB16974.1| 69|Caenorhabditis elegans rab14-like prot... 42 5e-04
U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein. 42 5e-04
Z71180-2|CAA94890.1| 207|Caenorhabditis elegans Hypothetical pr... 42 6e-04
Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical pr... 42 6e-04
Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical pr... 40 0.002
U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding pro... 40 0.002
U68253-1|AAB16968.1| 65|Caenorhabditis elegans rab6-like protein. 39 0.003
Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical p... 33 0.16
AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical ... 33 0.21
Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical pr... 33 0.28
U68262-1|AAB16977.1| 74|Caenorhabditis elegans RAM1-like protein. 33 0.28
L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleot... 33 0.28
AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical ... 33 0.28
U97592-7|AAB52874.2| 332|Caenorhabditis elegans Sperm-specific ... 32 0.49
AC024812-5|AAF59556.1| 191|Caenorhabditis elegans Hypothetical ... 32 0.49
Z93385-1|CAB07638.1| 312|Caenorhabditis elegans Hypothetical pr... 31 0.64
Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical pr... 31 0.64
Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical pr... 31 1.1
AL117204-37|CAB55148.2| 248|Caenorhabditis elegans Hypothetical... 31 1.1
Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical pr... 29 3.4
U68261-1|AAB16976.1| 53|Caenorhabditis elegans rab19-like prot... 29 3.4
AL033514-22|CAA22106.3| 1353|Caenorhabditis elegans Hypothetical... 29 3.4
AF183401-1|AAF13189.1| 1353|Caenorhabditis elegans TIM-1 protein. 29 3.4
AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G... 29 3.4
AL032637-13|CAA21615.1| 709|Caenorhabditis elegans Hypothetical... 28 6.0
AC087079-5|ABC48240.1| 367|Caenorhabditis elegans Hypothetical ... 28 6.0
AC087079-4|ABC48239.1| 370|Caenorhabditis elegans Hypothetical ... 28 6.0
U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylatio... 28 7.9
U50068-6|AAB37736.2| 1079|Caenorhabditis elegans Hypothetical pr... 28 7.9
AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical ... 28 7.9
>AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family
protein 37 protein.
Length = 196
Score = 76.6 bits (180), Expect = 2e-14
Identities = 36/79 (45%), Positives = 55/79 (69%)
Frame = +2
Query: 263 GKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGMERIASVTSSY 442
GK+ L R+ + F+ N++ +T+G+D+ KL + DK VKLQ+WDT G ER SVT+SY
Sbjct: 14 GKTCLLIRYKDGAFL-NNNFISTVGIDYRNKLITMGDKKVKLQIWDTAGQERFRSVTTSY 72
Query: 443 YKFAEAAILVFSLDNASSF 499
Y+ A+A +LV+ + N +SF
Sbjct: 73 YRDADALLLVYDIANRASF 91
>AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein.
Length = 196
Score = 76.6 bits (180), Expect = 2e-14
Identities = 36/79 (45%), Positives = 55/79 (69%)
Frame = +2
Query: 263 GKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGMERIASVTSSY 442
GK+ L R+ + F+ N++ +T+G+D+ KL + DK VKLQ+WDT G ER SVT+SY
Sbjct: 14 GKTCLLIRYKDGAFL-NNNFISTVGIDYRNKLITMGDKKVKLQIWDTAGQERFRSVTTSY 72
Query: 443 YKFAEAAILVFSLDNASSF 499
Y+ A+A +LV+ + N +SF
Sbjct: 73 YRDADALLLVYDIANRASF 91
>AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical
protein Y45F3A.2 protein.
Length = 216
Score = 74.5 bits (175), Expect = 7e-14
Identities = 36/84 (42%), Positives = 49/84 (58%)
Frame = +2
Query: 257 GVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGMERIASVTS 436
GVGK+ L R+F F P AT+G+D K +V + +KLQ+WDT G ER S+T
Sbjct: 17 GVGKTCLVRKFTQGIFPPGQS--ATIGVDFMIKTVKVGNDKIKLQIWDTAGQERFRSITQ 74
Query: 437 SYYKFAEAAILVFSLDNASSFHIL 508
SYY+ A A +LV+ + SF L
Sbjct: 75 SYYRSAHAIVLVYDVSCQPSFDCL 98
>Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical
protein F59B2.7 protein.
Length = 205
Score = 73.7 bits (173), Expect = 1e-13
Identities = 33/87 (37%), Positives = 56/87 (64%)
Frame = +2
Query: 242 FVW*NGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGMERI 421
F+ VGK+S+ RF+ ++F ++ +AT+G+D K + D+ ++LQLWDT G ER
Sbjct: 16 FLGEQSVGKTSIITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQERF 73
Query: 422 ASVTSSYYKFAEAAILVFSLDNASSFH 502
S+ SY + + A++V+ + NA+SFH
Sbjct: 74 RSLIPSYIRDSSVAVVVYDITNANSFH 100
>U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family protein
6.2 protein.
Length = 205
Score = 73.3 bits (172), Expect = 2e-13
Identities = 34/87 (39%), Positives = 56/87 (64%)
Frame = +2
Query: 242 FVW*NGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGMERI 421
F+ VGK+SL RF+ ++F ++ +AT+G+D K + D+ V+LQLWDT G ER
Sbjct: 15 FLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERF 72
Query: 422 ASVTSSYYKFAEAAILVFSLDNASSFH 502
S+ SY + + A++V+ + N++SFH
Sbjct: 73 RSLIPSYIRDSTVAVVVYDITNSNSFH 99
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 71.7 bits (168), Expect = 5e-13
Identities = 34/82 (41%), Positives = 50/82 (60%)
Frame = +2
Query: 254 NGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGMERIASVT 433
+GVGKSSL RF +NTF N T+G+D + + + VKLQ+WDT G ER ++T
Sbjct: 19 SGVGKSSLLLRFADNTFSENYI--TTIGVDFKIRTMDINGQRVKLQIWDTAGQERFRTIT 76
Query: 434 SSYYKFAEAAILVFSLDNASSF 499
S+YY+ ++V+ + N SF
Sbjct: 77 STYYRGTHGVVVVYDVTNGESF 98
>Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical
protein W03C9.3 protein.
Length = 209
Score = 71.3 bits (167), Expect = 7e-13
Identities = 35/100 (35%), Positives = 61/100 (61%)
Frame = +2
Query: 254 NGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGMERIASVT 433
+GVGK+SL +++N F ++ +AT+G D + + D+ V LQ+WDT G ER S+
Sbjct: 18 SGVGKTSLMNQYVNRRF--SNQYKATIGADFLTRDVNIDDRTVTLQIWDTAGQERFQSLG 75
Query: 434 SSYYKFAEAAILVFSLDNASSFHILVNIYLKLYLMQKTQR 553
++Y+ A+ +L F + NA+SF L + + +L+Q + R
Sbjct: 76 VAFYRGADCCVLAFDVTNAASFKSL-DSWRDEFLIQASPR 114
>AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical
protein Y62E10A.9 protein.
Length = 210
Score = 70.9 bits (166), Expect = 9e-13
Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Frame = +2
Query: 257 GVGKSSLFRRFINNTFVPNSDRRAT-LGLDHFEKLYQVADKDVKLQLWDTGGMERIASVT 433
GVGK+ + +RF N TFV DR+ T +G+D K V K VKLQ+WDTGG ER ++T
Sbjct: 20 GVGKTCVVQRFRNGTFV---DRQGTTIGVDFTMKTLVVDGKRVKLQIWDTGGQERFRTIT 76
Query: 434 SSYYKFAEAAILVFSLDNASSF 499
SYY+ A +L + + SF
Sbjct: 77 QSYYRSANGIVLCYDITCKQSF 98
>U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family protein
10 protein.
Length = 201
Score = 70.5 bits (165), Expect = 1e-12
Identities = 33/82 (40%), Positives = 53/82 (64%)
Frame = +2
Query: 254 NGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGMERIASVT 433
+GVGK+ + RF ++ F N+ +T+G+D K ++ K +KLQ+WDT G ER ++T
Sbjct: 18 SGVGKTCILYRFSDDAF--NTTFISTIGIDFKIKTIELKGKKIKLQIWDTAGQERFHTIT 75
Query: 434 SSYYKFAEAAILVFSLDNASSF 499
+SYY+ A +LV+ + NA SF
Sbjct: 76 TSYYRGAMGIMLVYDITNAKSF 97
>U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like
protein.
Length = 124
Score = 70.5 bits (165), Expect = 1e-12
Identities = 33/82 (40%), Positives = 53/82 (64%)
Frame = +2
Query: 254 NGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGMERIASVT 433
+GVGK+ + RF ++ F N+ +T+G+D K ++ K +KLQ+WDT G ER ++T
Sbjct: 18 SGVGKTCILYRFSDDAF--NTTFISTIGIDFKIKTIELKGKKIKLQIWDTAGQERFHTIT 75
Query: 434 SSYYKFAEAAILVFSLDNASSF 499
+SYY+ A +LV+ + NA SF
Sbjct: 76 TSYYRGAMGIMLVYDITNAKSF 97
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 69.7 bits (163), Expect = 2e-12
Identities = 35/85 (41%), Positives = 52/85 (61%)
Frame = +2
Query: 254 NGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGMERIASVT 433
+GVGKSSL RF+++ F P ++ AT+G+D + VKL +WDT G ER ++T
Sbjct: 20 SGVGKSSLMLRFVDDVFDP--EQAATIGVDFRVTSMAIDGNRVKLAIWDTAGQERFRTLT 77
Query: 434 SSYYKFAEAAILVFSLDNASSFHIL 508
SYY+ A+ I V+ + + SSF L
Sbjct: 78 PSYYRGAQGVICVYDVTSRSSFEKL 102
>AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family
protein 11.1 protein.
Length = 211
Score = 69.3 bits (162), Expect = 3e-12
Identities = 32/76 (42%), Positives = 49/76 (64%)
Frame = +2
Query: 254 NGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGMERIASVT 433
+GVGKS+L RF N F N + ++T+G++ + V K VK Q+WDT G ER ++T
Sbjct: 20 SGVGKSNLLSRFTRNEF--NLESKSTIGVEFATRSISVEGKTVKAQIWDTAGQERYRAIT 77
Query: 434 SSYYKFAEAAILVFSL 481
S+YY+ A A+LV+ +
Sbjct: 78 SAYYRGAVGALLVYDI 93
>Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical
protein W04G5.2 protein.
Length = 198
Score = 68.9 bits (161), Expect = 3e-12
Identities = 34/81 (41%), Positives = 48/81 (59%)
Frame = +2
Query: 257 GVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGMERIASVTS 436
GVGKS+L RF N F N + T+G++ K+ V K VK+Q+WDT GMER S
Sbjct: 18 GVGKSNLLSRFTRNEF--NLKSKPTIGVEFATKIISVEGKAVKVQIWDTAGMERFRCGAS 75
Query: 437 SYYKFAEAAILVFSLDNASSF 499
SYY+ A A+LV+ + ++
Sbjct: 76 SYYRGALGALLVYDISKHKTY 96
>U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein.
Length = 123
Score = 68.1 bits (159), Expect = 6e-12
Identities = 32/87 (36%), Positives = 55/87 (63%)
Frame = +2
Query: 254 NGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGMERIASVT 433
+GVGK+ + RF +++F N+ +T+G+D + ++ K +KLQ+WDT G ER ++T
Sbjct: 17 SGVGKTCVLFRFSDDSF--NNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTIT 74
Query: 434 SSYYKFAEAAILVFSLDNASSFHILVN 514
++YY+ A ILV+ + N SF + N
Sbjct: 75 TAYYRGAMGIILVYDITNERSFENIKN 101
>AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family
protein 8 protein.
Length = 211
Score = 68.1 bits (159), Expect = 6e-12
Identities = 32/87 (36%), Positives = 55/87 (63%)
Frame = +2
Query: 254 NGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGMERIASVT 433
+GVGK+ + RF +++F N+ +T+G+D + ++ K +KLQ+WDT G ER ++T
Sbjct: 17 SGVGKTCVLFRFSDDSF--NNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTIT 74
Query: 434 SSYYKFAEAAILVFSLDNASSFHILVN 514
++YY+ A ILV+ + N SF + N
Sbjct: 75 TAYYRGAMGIILVYDITNERSFENIKN 101
>AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein.
Length = 211
Score = 68.1 bits (159), Expect = 6e-12
Identities = 32/87 (36%), Positives = 55/87 (63%)
Frame = +2
Query: 254 NGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGMERIASVT 433
+GVGK+ + RF +++F N+ +T+G+D + ++ K +KLQ+WDT G ER ++T
Sbjct: 17 SGVGKTCVLFRFSDDSF--NNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTIT 74
Query: 434 SSYYKFAEAAILVFSLDNASSFHILVN 514
++YY+ A ILV+ + N SF + N
Sbjct: 75 TAYYRGAMGIILVYDITNERSFENIKN 101
>Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical
protein K09A9.2 protein.
Length = 210
Score = 67.3 bits (157), Expect = 1e-11
Identities = 31/84 (36%), Positives = 53/84 (63%)
Frame = +2
Query: 257 GVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGMERIASVTS 436
GVGKS L +F F+ +D T+G++ ++ +V+ + +KLQ+WDT G ER +VT
Sbjct: 21 GVGKSCLLHQFTEKKFM--ADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTR 78
Query: 437 SYYKFAEAAILVFSLDNASSFHIL 508
SYY+ A A++V+ + S+++ L
Sbjct: 79 SYYRGAAGALMVYDITRRSTYNHL 102
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = +1
Query: 544 NAKIFLCGNKSDLEGASPQVTDADIETFCEQWPQFSKLAHTKLHAKTGKGIEE 702
N IFL GNK+DLE V + + F E+ + L + AKTG +E+
Sbjct: 116 NTAIFLIGNKADLED-QRDVPYEEAKAFAEE----NGLTFLECSAKTGSNVED 163
>U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated
protein 108 protein.
Length = 214
Score = 67.3 bits (157), Expect = 1e-11
Identities = 32/86 (37%), Positives = 50/86 (58%)
Frame = +2
Query: 257 GVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGMERIASVTS 436
GVGKS L +F + F P D T+G++ ++ + K +KLQ+WDT G E S+T
Sbjct: 16 GVGKSCLLLQFTDKRFQPVHD--LTIGVEFGARMVTIDGKQIKLQIWDTAGQESFRSITR 73
Query: 437 SYYKFAEAAILVFSLDNASSFHILVN 514
SYY+ A A+LV+ + +F+ L +
Sbjct: 74 SYYRGAAGALLVYDITRRDTFNHLTS 99
>U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like
protein.
Length = 127
Score = 67.3 bits (157), Expect = 1e-11
Identities = 31/76 (40%), Positives = 49/76 (64%)
Frame = +2
Query: 254 NGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGMERIASVT 433
+GVGKS+L RF N F + + ++T+G++ + V K VK Q+WDT G ER ++T
Sbjct: 20 SGVGKSNLLSRFTRNEF--HLESKSTIGVEFATRSISVEGKTVKAQIWDTAGQERYRAIT 77
Query: 434 SSYYKFAEAAILVFSL 481
S+YY+ A A+LV+ +
Sbjct: 78 SAYYRGAVGALLVYDI 93
>AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family
protein 1 protein.
Length = 205
Score = 67.3 bits (157), Expect = 1e-11
Identities = 31/83 (37%), Positives = 53/83 (63%)
Frame = +2
Query: 254 NGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGMERIASVT 433
+GVGKS L RF ++T+ + +T+G+D + ++ K +KLQ+WDT G ER ++T
Sbjct: 20 SGVGKSCLLLRFADDTYTESYI--STIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTIT 77
Query: 434 SSYYKFAEAAILVFSLDNASSFH 502
SSYY+ A I+V+ + + +F+
Sbjct: 78 SSYYRGAHGIIVVYDITDQETFN 100
>Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical
protein F11A5.4 protein.
Length = 203
Score = 66.5 bits (155), Expect = 2e-11
Identities = 35/84 (41%), Positives = 51/84 (60%)
Frame = +2
Query: 257 GVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGMERIASVTS 436
GVGKS+L RFI F +S +TLG++ + ++ K VKL +WDT G ER S+
Sbjct: 16 GVGKSNLLLRFIGKPF--DSIHPSTLGIEFGFRNLEIDRKKVKLHVWDTCGQERFRSLVG 73
Query: 437 SYYKFAEAAILVFSLDNASSFHIL 508
SYY+ A A+LV+ + + SF+ L
Sbjct: 74 SYYRHAIGALLVYDITSRESFYHL 97
>U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical
protein K02E10.1 protein.
Length = 218
Score = 65.7 bits (153), Expect = 3e-11
Identities = 33/88 (37%), Positives = 49/88 (55%)
Frame = +2
Query: 263 GKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGMERIASVTSSY 442
GKS + RF N+F D +TLG+D K ++ ++L+LWDT GMER ++ +SY
Sbjct: 18 GKSCILLRFAENSF--RMDHISTLGVDFKLKTIKLGRDKIRLELWDTAGMERYRTIYNSY 75
Query: 443 YKFAEAAILVFSLDNASSFHILVNIYLK 526
Y A + V+ + N SF L +LK
Sbjct: 76 YHSAHGVMCVYDMTNEKSFENLEKYWLK 103
>U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 63.3 bits (147), Expect = 2e-10
Identities = 32/83 (38%), Positives = 51/83 (61%)
Frame = +2
Query: 254 NGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGMERIASVT 433
+ VGK+S R+ +++F S +T+G+D K DK VKLQ+WDT G ER ++T
Sbjct: 31 SSVGKTSFLFRYCDDSFT--SAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTIT 88
Query: 434 SSYYKFAEAAILVFSLDNASSFH 502
++YY+ A IL++ + N SF+
Sbjct: 89 TAYYRGAMGFILMYDITNEESFN 111
>U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 63.3 bits (147), Expect = 2e-10
Identities = 32/83 (38%), Positives = 51/83 (61%)
Frame = +2
Query: 254 NGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGMERIASVT 433
+ VGK+S R+ +++F S +T+G+D K DK VKLQ+WDT G ER ++T
Sbjct: 31 SSVGKTSFLFRYCDDSFT--SAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTIT 88
Query: 434 SSYYKFAEAAILVFSLDNASSFH 502
++YY+ A IL++ + N SF+
Sbjct: 89 TAYYRGAMGFILMYDITNEESFN 111
>U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family
protein 3, isoform b protein.
Length = 219
Score = 63.3 bits (147), Expect = 2e-10
Identities = 32/83 (38%), Positives = 51/83 (61%)
Frame = +2
Query: 254 NGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGMERIASVT 433
+ VGK+S R+ +++F S +T+G+D K DK VKLQ+WDT G ER ++T
Sbjct: 31 SSVGKTSFLFRYCDDSFT--SAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTIT 88
Query: 434 SSYYKFAEAAILVFSLDNASSFH 502
++YY+ A IL++ + N SF+
Sbjct: 89 TAYYRGAMGFILMYDITNEESFN 111
>U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family
protein 3, isoform a protein.
Length = 233
Score = 63.3 bits (147), Expect = 2e-10
Identities = 32/83 (38%), Positives = 51/83 (61%)
Frame = +2
Query: 254 NGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGMERIASVT 433
+ VGK+S R+ +++F S +T+G+D K DK VKLQ+WDT G ER ++T
Sbjct: 45 SSVGKTSFLFRYCDDSFT--SAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTIT 102
Query: 434 SSYYKFAEAAILVFSLDNASSFH 502
++YY+ A IL++ + N SF+
Sbjct: 103 TAYYRGAMGFILMYDITNEESFN 125
>AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein.
Length = 219
Score = 63.3 bits (147), Expect = 2e-10
Identities = 32/83 (38%), Positives = 51/83 (61%)
Frame = +2
Query: 254 NGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGMERIASVT 433
+ VGK+S R+ +++F S +T+G+D K DK VKLQ+WDT G ER ++T
Sbjct: 31 SSVGKTSFLFRYCDDSFT--SAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTIT 88
Query: 434 SSYYKFAEAAILVFSLDNASSFH 502
++YY+ A IL++ + N SF+
Sbjct: 89 TAYYRGAMGFILMYDITNEESFN 111
>AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical
protein 4R79.2 protein.
Length = 395
Score = 62.9 bits (146), Expect = 2e-10
Identities = 31/87 (35%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Frame = +2
Query: 242 FVW*NGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVA-DKDVKLQLWDTGGMER 418
FV + VGK+ RF +N F P + AT+G+D K ++ ++ + +QLWDT G ER
Sbjct: 207 FVGDSAVGKTCFLHRFCHNRFKPLFN--ATIGVDFTVKTMKIPPNRAIAMQLWDTAGQER 264
Query: 419 IASVTSSYYKFAEAAILVFSLDNASSF 499
S+T Y++ A+ +L+F + + SF
Sbjct: 265 FRSITKQYFRKADGVVLMFDVTSEQSF 291
>AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical
protein Y71H2AM.12 protein.
Length = 195
Score = 62.9 bits (146), Expect = 2e-10
Identities = 31/87 (35%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Frame = +2
Query: 254 NGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVAD-KDVKLQLWDTGGMERIASV 430
+G GK++L F++NTF +D T+G+D K+ Q+ D + ++LQLWDT G ER +
Sbjct: 15 SGAGKTALLTCFLDNTF--ETDPLTTIGIDFKHKIVQLNDGQSIRLQLWDTAGQERFRQL 72
Query: 431 TSSYYKFAEAAILVFSLDNASSFHILV 511
+Y + A A+LV L + + L+
Sbjct: 73 APAYIRSARVALLVIDLSDENCVEHLI 99
>Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical
protein R07B1.12 protein.
Length = 212
Score = 62.5 bits (145), Expect = 3e-10
Identities = 32/73 (43%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Frame = +2
Query: 257 GVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDV-KLQLWDTGGMERIASVT 433
GVGK+S+ RRF++N F +S+ + T+G+D K+ V + V LQ+WD G +R +T
Sbjct: 21 GVGKTSIIRRFVHNVF--SSNYKTTIGVDFALKILPVDENTVVHLQIWDISGQDRYGVMT 78
Query: 434 SSYYKFAEAAILV 472
YYK A AAI+V
Sbjct: 79 RVYYKDAHAAIIV 91
>DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GLO-1
protein.
Length = 212
Score = 62.5 bits (145), Expect = 3e-10
Identities = 32/73 (43%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Frame = +2
Query: 257 GVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDV-KLQLWDTGGMERIASVT 433
GVGK+S+ RRF++N F +S+ + T+G+D K+ V + V LQ+WD G +R +T
Sbjct: 21 GVGKTSIIRRFVHNVF--SSNYKTTIGVDFALKILPVDENTVVHLQIWDISGQDRYGVMT 78
Query: 434 SSYYKFAEAAILV 472
YYK A AAI+V
Sbjct: 79 RVYYKDAHAAIIV 91
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 62.1 bits (144), Expect = 4e-10
Identities = 34/80 (42%), Positives = 45/80 (56%)
Frame = +2
Query: 260 VGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGMERIASVTSS 439
VGKSS R I F + +TLG+D K V ++V LQLWDT G ER S+ S
Sbjct: 472 VGKSSFVMRVIRRQFT--NQLPSTLGVDFHVKTVNVDGRNVALQLWDTAGQERFRSLCKS 529
Query: 440 YYKFAEAAILVFSLDNASSF 499
Y++ A+ AILV+ + SF
Sbjct: 530 YFRRADGAILVYDVCAEQSF 549
>Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical
protein F26H9.6 protein.
Length = 208
Score = 61.7 bits (143), Expect = 5e-10
Identities = 30/82 (36%), Positives = 47/82 (57%)
Frame = +2
Query: 254 NGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGMERIASVT 433
+ VGKSSL RF+ F + + +T+G + + D +K ++WDT G ER S+
Sbjct: 28 SAVGKSSLVLRFVKGQF--HEYQESTIGAAFLTQTVCLDDATIKFEIWDTAGQERYHSLA 85
Query: 434 SSYYKFAEAAILVFSLDNASSF 499
YY+ A+AAI+V+ + N SF
Sbjct: 86 PMYYRGAQAAIVVYDITNQESF 107
>Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical
protein D2013.1 protein.
Length = 229
Score = 60.9 bits (141), Expect = 9e-10
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Frame = +2
Query: 260 VGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADK-DVKLQLWDTGGMERIASVTS 436
VGKSSL R F SD T+G+D + ++ ++ VKLQLWDT G E+ S+T
Sbjct: 28 VGKSSLLRYFTEGKMAEISD--PTVGVDFYARMIELRPGYRVKLQLWDTAGQEKFRSITK 85
Query: 437 SYYKFAEAAILVFSLDNASSFHILVN 514
SYY+ + + ++ N SF + N
Sbjct: 86 SYYRNSVGVLAIYDTTNRESFEHVEN 111
>AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical
protein Y87G2A.4 protein.
Length = 215
Score = 57.2 bits (132), Expect = 1e-08
Identities = 34/91 (37%), Positives = 53/91 (58%), Gaps = 9/91 (9%)
Frame = +2
Query: 254 NGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEK--LYQVA-------DKDVKLQLWDTG 406
+GVGK+S R+ +NTF +T+G+D EK +Y+ + + V LQLWDT
Sbjct: 16 SGVGKTSFLHRYTDNTFT--GQFISTVGIDFKEKKVVYKSSRGGFGGRGQRVLLQLWDTA 73
Query: 407 GMERIASVTSSYYKFAEAAILVFSLDNASSF 499
G ER S+T+++++ A IL+F + N SF
Sbjct: 74 GQERFRSLTTAFFRDAMGFILIFDITNEQSF 104
Score = 31.9 bits (69), Expect = 0.49
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +1
Query: 520 LEIVSYAENAKIFLCGNKSDLEGASPQVTDADIETFCEQ--WPQFSKLAHTKLHAK 681
L++ +Y E I +CGNK+DLE QV+ A + +Q P F A T + +
Sbjct: 114 LKVHAYCEQPDIIICGNKADLENRR-QVSTARAKQLADQLGLPYFETSACTSTNVE 168
>AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein.
Length = 215
Score = 57.2 bits (132), Expect = 1e-08
Identities = 34/91 (37%), Positives = 53/91 (58%), Gaps = 9/91 (9%)
Frame = +2
Query: 254 NGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEK--LYQVA-------DKDVKLQLWDTG 406
+GVGK+S R+ +NTF +T+G+D EK +Y+ + + V LQLWDT
Sbjct: 16 SGVGKTSFLHRYTDNTFT--GQFISTVGIDFKEKKVVYKSSRGGFGGRGQRVLLQLWDTA 73
Query: 407 GMERIASVTSSYYKFAEAAILVFSLDNASSF 499
G ER S+T+++++ A IL+F + N SF
Sbjct: 74 GQERFRSLTTAFFRDAMGFILIFDITNEQSF 104
Score = 31.9 bits (69), Expect = 0.49
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +1
Query: 520 LEIVSYAENAKIFLCGNKSDLEGASPQVTDADIETFCEQ--WPQFSKLAHTKLHAK 681
L++ +Y E I +CGNK+DLE QV+ A + +Q P F A T + +
Sbjct: 114 LKVHAYCEQPDIIICGNKADLENRR-QVSTARAKQLADQLGLPYFETSACTSTNVE 168
>Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical
protein C08F8.7 protein.
Length = 205
Score = 56.8 bits (131), Expect = 1e-08
Identities = 31/84 (36%), Positives = 50/84 (59%)
Frame = +2
Query: 257 GVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGMERIASVTS 436
GVGKS+L +++ FV D AT+ D + KL +V ++ +L++ DT G E+ +
Sbjct: 13 GVGKSALTLQYVQGIFVHTYD--ATIE-DSYRKLSKVDAENARLEILDTAGTEQFTGMRE 69
Query: 437 SYYKFAEAAILVFSLDNASSFHIL 508
+YY+ A+ +LVFSL S+F L
Sbjct: 70 TYYRTAQGFVLVFSLAETSTFENL 93
>AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family
protein 18, isoform a protein.
Length = 193
Score = 56.8 bits (131), Expect = 1e-08
Identities = 28/75 (37%), Positives = 44/75 (58%)
Frame = +2
Query: 284 RFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGMERIASVTSSYYKFAEAA 463
RF+++ F P ++ AT+G+D + VKL +WDT G ER ++T SYY+ A+
Sbjct: 3 RFVDDVFDP--EQAATIGVDFRVTSMAIDGNRVKLAIWDTAGQERFRTLTPSYYRGAQGV 60
Query: 464 ILVFSLDNASSFHIL 508
I V+ + + SSF L
Sbjct: 61 ICVYDVTSRSSFEKL 75
>Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical
protein F11A5.3 protein.
Length = 201
Score = 56.4 bits (130), Expect = 2e-08
Identities = 31/81 (38%), Positives = 45/81 (55%)
Frame = +2
Query: 257 GVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGMERIASVTS 436
GVGKS+L RF + F P TLG++ K Q+ V+L++WDT G E S+
Sbjct: 16 GVGKSNLLLRFTDELFDPI--HTTTLGVEFGYKDLQIDKYKVRLRVWDTCGQENFRSIIR 73
Query: 437 SYYKFAEAAILVFSLDNASSF 499
+YY+ A A+LV+ + SF
Sbjct: 74 AYYRNALGALLVYDITCRKSF 94
>Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical
protein T01B7.3 protein.
Length = 207
Score = 53.6 bits (123), Expect = 1e-07
Identities = 29/90 (32%), Positives = 45/90 (50%)
Frame = +2
Query: 260 VGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGMERIASVTSS 439
VGKSSL RF+ N F + +T+ K V D L +WDT G E+ ++
Sbjct: 23 VGKSSLVLRFVENKF--SCKHLSTIQASFQNKTVNVEDCQADLHIWDTAGQEKYHALGPI 80
Query: 440 YYKFAEAAILVFSLDNASSFHILVNIYLKL 529
YY+ + +LVF + + SF + N L++
Sbjct: 81 YYRGSNGVLLVFDITDRKSFEKVKNWVLEI 110
>Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical
protein C25D7.7 protein.
Length = 181
Score = 50.4 bits (115), Expect = 1e-06
Identities = 26/87 (29%), Positives = 49/87 (56%)
Frame = +2
Query: 257 GVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGMERIASVTS 436
GVGKS+L +F+++TF+ D D + K +V + L++ DT G E+ +S+
Sbjct: 13 GVGKSALTVQFVSSTFIEKYDPTIE---DFYRKEIEVDGQPSVLEILDTAGTEQFSSMRD 69
Query: 437 SYYKFAEAAILVFSLDNASSFHILVNI 517
Y K + ++V+S+ + +FH + N+
Sbjct: 70 LYIKNGQGFVVVYSITSQQTFHDIRNM 96
>Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical
protein F43D9.2 protein.
Length = 307
Score = 50.4 bits (115), Expect = 1e-06
Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Frame = +2
Query: 260 VGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGMERI-ASVTS 436
VGK+ L RF F +++ AT+G+D E+ + ++ +++QLWDT G ER S+ +
Sbjct: 111 VGKTCLSFRFCCGRFPEHTE--ATIGVDFRERSCVIENELLRVQLWDTAGQERYRQSIVA 168
Query: 437 SYYKFAEAAILVFSLDNASSFHIL 508
YY+ A + V+ + SF+ L
Sbjct: 169 HYYRNVNAVVFVYDVTCRESFNDL 192
>U68260-1|AAB16975.1| 69|Caenorhabditis elegans rab19-like
protein.
Length = 69
Score = 46.4 bits (105), Expect = 2e-05
Identities = 26/52 (50%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Frame = +2
Query: 257 GVGKSSLFRRFINNTFVPNSDRRAT-LGLDHFEKLYQVADKDVKLQLWDTGG 409
GVGK+ + +RF N TFV DR+ T +G+D K V K VKLQ+WDT G
Sbjct: 20 GVGKTCVVQRFRNGTFV---DRQGTTIGVDFTMKTLVVDGKRVKLQIWDTAG 68
>AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical
protein Y11D7A.4 protein.
Length = 248
Score = 46.0 bits (104), Expect = 3e-05
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = +2
Query: 263 GKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVA-DKDVKLQLWDTGGMERIASVTSS 439
GK+S+ +RF +F + TLGLD F + + + V +Q+WD GG +
Sbjct: 47 GKTSICQRFAKESF--DKSYHQTLGLDFFSRRITLPHEMQVLVQVWDIGGQSIAGEMIDK 104
Query: 440 YYKFAEAAILVFSLDNASSFHILVN 514
Y A LV+ + N+ SF V+
Sbjct: 105 YLTGANIVFLVYDVTNSKSFENAVD 129
>U68254-1|AAB16969.1| 67|Caenorhabditis elegans rab6-like protein.
Length = 67
Score = 44.8 bits (101), Expect = 6e-05
Identities = 21/54 (38%), Positives = 35/54 (64%)
Frame = +2
Query: 242 FVW*NGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDT 403
F+ VGK+SL RF+ ++F ++ +AT+G+D K + D+ V+LQ+WDT
Sbjct: 15 FLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQMWDT 66
>U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein.
Length = 66
Score = 44.8 bits (101), Expect = 6e-05
Identities = 21/53 (39%), Positives = 31/53 (58%)
Frame = +2
Query: 257 GVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGME 415
GVGKS L +F + F P D T+G++ ++ + K +KLQ+WDT G E
Sbjct: 16 GVGKSCLLLQFTDKRFQPVHD--LTIGVEFGARMVTIDGKQIKLQMWDTAGQE 66
>U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein.
Length = 66
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/50 (46%), Positives = 31/50 (62%)
Frame = +2
Query: 254 NGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDT 403
+GVGKSSL RF +NTF N T+G+D + + + VKLQ+WDT
Sbjct: 19 SGVGKSSLLLRFADNTFSEN--YITTIGVDFKIRTMDINGQRVKLQIWDT 66
>AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-related
gtpase) homologprotein 1 protein.
Length = 213
Score = 43.6 bits (98), Expect = 1e-04
Identities = 24/81 (29%), Positives = 42/81 (51%)
Frame = +2
Query: 257 GVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGMERIASVTS 436
GVGKS+L +F+ + FV + D + K + ++ + + DT G E +++
Sbjct: 27 GVGKSALTLQFMYDEFVEEYEPTKA---DSYRKKVVLDGEECSIDILDTAGQEDYSAIRD 83
Query: 437 SYYKFAEAAILVFSLDNASSF 499
+YY+ E I VFS+ + SF
Sbjct: 84 NYYRSGEGFICVFSILDMESF 104
>Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical
protein K01G5.4 protein.
Length = 215
Score = 41.9 bits (94), Expect = 5e-04
Identities = 19/75 (25%), Positives = 36/75 (48%)
Frame = +2
Query: 257 GVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGMERIASVTS 436
G GK++ +R + F ATLG++ ++ ++ +WDT G E+ +
Sbjct: 19 GTGKTTFVKRHLTGEF--EKKYVATLGVEVHPLVFHTNRGQIRFNVWDTAGQEKFGGLRD 76
Query: 437 SYYKFAEAAILVFSL 481
YY + AI++F +
Sbjct: 77 GYYIQGQCAIIMFDV 91
>U68259-1|AAB16974.1| 69|Caenorhabditis elegans rab14-like
protein.
Length = 69
Score = 41.9 bits (94), Expect = 5e-04
Identities = 19/51 (37%), Positives = 32/51 (62%)
Frame = +2
Query: 257 GVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGG 409
GVGKS L +F F+ +D T+G++ ++ +V+ + +KLQ+WDT G
Sbjct: 21 GVGKSCLLHQFTEKKFM--ADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAG 69
>U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein.
Length = 69
Score = 41.9 bits (94), Expect = 5e-04
Identities = 20/52 (38%), Positives = 33/52 (63%)
Frame = +2
Query: 254 NGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGG 409
+GVGKS L RF ++T+ + +T+G+D + ++ K +KLQ+WDT G
Sbjct: 20 SGVGKSCLLLRFADDTYTESYI--STIGVDFKIRTIELDGKTIKLQIWDTAG 69
>Z71180-2|CAA94890.1| 207|Caenorhabditis elegans Hypothetical
protein F22E12.2 protein.
Length = 207
Score = 41.5 bits (93), Expect = 6e-04
Identities = 26/91 (28%), Positives = 44/91 (48%)
Frame = +2
Query: 227 CIESNFVW*NGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTG 406
C++ FV VGK+S+ + N + N A D+F + V K ++LQL DT
Sbjct: 9 CLKCIFVGNAAVGKTSMIVSYTTNVYPHNYVPTA---FDNFSVVVLVDKKPIRLQLHDTA 65
Query: 407 GMERIASVTSSYYKFAEAAILVFSLDNASSF 499
G ++ Y A+ ++V+S+ + SF
Sbjct: 66 GQSSFDTLRPLCYTDADVFVIVYSVVDLQSF 96
>Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical
protein F54C8.5 protein.
Length = 207
Score = 41.5 bits (93), Expect = 6e-04
Identities = 28/90 (31%), Positives = 41/90 (45%)
Frame = +2
Query: 260 VGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGMERIASVTSS 439
VGKS+L RF N F +R + D K +D L++ DT G + S
Sbjct: 24 VGKSALVLRFTQNIF---PERYESTIEDQHSKHIAAFHRDYHLRVTDTAGQQEYTVFPRS 80
Query: 440 YYKFAEAAILVFSLDNASSFHILVNIYLKL 529
ILV+++D+ SF + NIY K+
Sbjct: 81 CSLDINGFILVYAIDDRKSFEMCSNIYEKI 110
>Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical
protein F22B5.1 protein.
Length = 184
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/73 (31%), Positives = 38/73 (52%)
Frame = +2
Query: 254 NGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGMERIASVT 433
+ GK++L ++F++ P TLG D + V KD +L LWD GG + + S
Sbjct: 25 DNAGKTTLMKKFLDE---PTDTIEPTLGFD----IKTVHFKDFQLNLWDVGGQKSLRSYW 77
Query: 434 SSYYKFAEAAILV 472
+Y++ +A I V
Sbjct: 78 KNYFESTDALIWV 90
>Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical
protein F17C8.4 protein.
Length = 211
Score = 39.5 bits (88), Expect = 0.002
Identities = 26/100 (26%), Positives = 44/100 (44%)
Frame = +2
Query: 257 GVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGMERIASVTS 436
GVGKSSL +F FV D D + + ++ V + + DT G E +++
Sbjct: 27 GVGKSSLTIQFFQKQFVDYYDPTIE---DQYIQHCEIDGNWVIMDVLDTAGQEEFSAMRE 83
Query: 437 SYYKFAEAAILVFSLDNASSFHILVNIYLKLYLMQKTQRY 556
Y + +LVFS+ SF +Y ++ ++ Y
Sbjct: 84 QYIRGGRGFLLVFSVTERKSFEEAHKLYNQVLRVKDRSEY 123
>U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding
protein protein.
Length = 211
Score = 39.5 bits (88), Expect = 0.002
Identities = 26/100 (26%), Positives = 44/100 (44%)
Frame = +2
Query: 257 GVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGMERIASVTS 436
GVGKSSL +F FV D D + + ++ V + + DT G E +++
Sbjct: 27 GVGKSSLTIQFFQKQFVDYYDPTIE---DQYIQHCEIDGNWVIMDVLDTAGQEEFSAMRE 83
Query: 437 SYYKFAEAAILVFSLDNASSFHILVNIYLKLYLMQKTQRY 556
Y + +LVFS+ SF +Y ++ ++ Y
Sbjct: 84 QYIRGGRGFLLVFSVTERKSFEEAHKLYNQVLRVKDRSEY 123
>U68253-1|AAB16968.1| 65|Caenorhabditis elegans rab6-like protein.
Length = 65
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/52 (32%), Positives = 33/52 (63%)
Frame = +2
Query: 242 FVW*NGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLW 397
F+ VGK+S+ RF+ ++F ++ +AT+G+D K + D+ ++LQ+W
Sbjct: 16 FLGEQSVGKTSIITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTIRLQIW 65
>Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical
protein ZK1320.6 protein.
Length = 539
Score = 33.5 bits (73), Expect = 0.16
Identities = 20/73 (27%), Positives = 34/73 (46%)
Frame = +2
Query: 254 NGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGMERIASVT 433
+G GK+S+ RR T+G + E ++ K+ +L WD GG+ ++ +
Sbjct: 378 DGAGKTSIVRRLKKVQMDTVMAPHPTIGFN-IETIHY---KNYRLNFWDVGGLPKLRHLW 433
Query: 434 SSYYKFAEAAILV 472
YY A+A V
Sbjct: 434 KHYYSNAQAIFYV 446
>AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical
protein Y116A8C.12 protein.
Length = 175
Score = 33.1 bits (72), Expect = 0.21
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +2
Query: 365 VADKDVKLQLWDTGGMERIASVTSSYYKFAEAAILVFSLDNA 490
V K++K +WD GG ++I + YY +A L+F +D A
Sbjct: 52 VTYKNIKFNVWDVGGQDKIRPLWRHYYTGTQA--LIFVMDAA 91
>Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical
protein F19H8.3 protein.
Length = 184
Score = 32.7 bits (71), Expect = 0.28
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 377 DVKLQLWDTGGMERIASVTSSYYKFAEAAILVFSLDNASSF 499
D++L +WD GG I S+YY+ + I V ++ F
Sbjct: 61 DIRLNVWDIGGQRSIRPYWSNYYENIDTLIFVIDSNDKKRF 101
>U68262-1|AAB16977.1| 74|Caenorhabditis elegans RAM1-like protein.
Length = 74
Score = 32.7 bits (71), Expect = 0.28
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 9/60 (15%)
Frame = +2
Query: 257 GVGKSSLFRRFINNTFVPNSDRRATLGLDHFEK--LYQVA-------DKDVKLQLWDTGG 409
GVGK+S R+ +NTF +T+G+D EK +Y+ + + V LQ+WDT G
Sbjct: 17 GVGKTSFLHRYTDNTF--TGQFISTVGIDFKEKKVVYESSRGGFGGRGQRVLLQIWDTAG 74
>L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 192
Score = 32.7 bits (71), Expect = 0.28
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +2
Query: 362 QVADKDVKLQLWDTGGMERIASVTSSYYKFAEAAILVFSLDNASS 496
+V K V+L LWDT G E + Y + ++ FS+D+ S
Sbjct: 47 EVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDS 91
>AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical
protein Y51H4A.3 protein.
Length = 192
Score = 32.7 bits (71), Expect = 0.28
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +2
Query: 362 QVADKDVKLQLWDTGGMERIASVTSSYYKFAEAAILVFSLDNASS 496
+V K V+L LWDT G E + Y + ++ FS+D+ S
Sbjct: 47 EVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDS 91
>U97592-7|AAB52874.2| 332|Caenorhabditis elegans Sperm-specific
family, class rprotein 2 protein.
Length = 332
Score = 31.9 bits (69), Expect = 0.49
Identities = 27/94 (28%), Positives = 52/94 (55%), Gaps = 4/94 (4%)
Frame = +2
Query: 260 VGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTG----GMERIAS 427
VGK+++ RR++ N F +S + T+ D + +++ + L + DT M R+ S
Sbjct: 28 VGKTNIIRRYLYNEF--SSKYKETIE-DLHSREFRIQGVPLPLDILDTNFNFPDMRRL-S 83
Query: 428 VTSSYYKFAEAAILVFSLDNASSFHILVNIYLKL 529
+ S A A +LVFS+D+ +SF + +I+ ++
Sbjct: 84 IAS-----ASAFLLVFSVDDVTSFKEMSDIWQEI 112
>AC024812-5|AAF59556.1| 191|Caenorhabditis elegans Hypothetical
protein Y54E10BR.2 protein.
Length = 191
Score = 31.9 bits (69), Expect = 0.49
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +2
Query: 386 LQLWDTGGMERIASVTSSYYKFAEAAILVFSLDNASSFHILVN 514
L WD GG E + + ++YY A A I V + F I+ +
Sbjct: 71 LHFWDLGGQESLRELWATYYDDANAMIFVVDATRSDLFPIVAS 113
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +1
Query: 541 ENAKIFLCGNKSDLEGASPQVTDADIETFCEQWPQFSKLAHTKLHAKTGKGIEECL 708
+N + + NKS++EGA+ A++ E S LA + A G IE C+
Sbjct: 125 QNIPVLVAVNKSEMEGAA---AAAEVRMLLEDDNHRSDLAVLPVSALEGTNIERCV 177
>Z93385-1|CAB07638.1| 312|Caenorhabditis elegans Hypothetical
protein M01E5.1 protein.
Length = 312
Score = 31.5 bits (68), Expect = 0.64
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 188 SKKETKYGCCKNSCIESN 241
S ETK+GCCK SC E++
Sbjct: 38 SNNETKFGCCKASCTETS 55
>Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical
protein F54C9.10 protein.
Length = 180
Score = 31.5 bits (68), Expect = 0.64
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +2
Query: 362 QVADKDVKLQLWDTGGMERIASVTSSYYKFAEAAILV 472
QV K++K Q+WD GG I YY +A I V
Sbjct: 54 QVEYKNLKFQVWDLGGQTSIRPYWRCYYANTDAIIYV 90
>Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical
protein ZK632.8 protein.
Length = 178
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/85 (20%), Positives = 40/85 (47%)
Frame = +2
Query: 254 NGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGMERIASVT 433
+ GK+++ ++ V + + T+G + +V+ +++ +WD GG E +
Sbjct: 26 DNAGKTTILYNYVTKDQV---ETKPTIG----SNVEEVSYRNLDFVIWDIGGQESLRKSW 78
Query: 434 SSYYKFAEAAILVFSLDNASSFHIL 508
S+YY + I+V + + I+
Sbjct: 79 STYYVQTDVVIVVIDSSDTTRIPIM 103
>AL117204-37|CAB55148.2| 248|Caenorhabditis elegans Hypothetical
protein Y116A8C.10b protein.
Length = 248
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +2
Query: 386 LQLWDTGGMERIASVTSSYYKFAEAAILVFSLDNASS 496
L+LWD GGM +++ A AILV L N S
Sbjct: 68 LELWDIGGMVAHRQAAQVFFEGAVGAILVHDLTNKRS 104
>Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical
protein Y57G11C.13 protein.
Length = 185
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/63 (26%), Positives = 30/63 (47%)
Frame = +2
Query: 362 QVADKDVKLQLWDTGGMERIASVTSSYYKFAEAAILVFSLDNASSFHILVNIYLKLYLMQ 541
++ +V ++LWD GG R S+ Y + A +VF +D A + + + L+
Sbjct: 59 KITKGNVTIKLWDIGGQPRFRSMWERYCRGVNA--IVFMVDAADEEKLEASRNELMQLLD 116
Query: 542 KTQ 550
K Q
Sbjct: 117 KPQ 119
>U68261-1|AAB16976.1| 53|Caenorhabditis elegans rab19-like
protein.
Length = 53
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 257 GVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVAD 373
GVGK+ L R+F F P + AT+G+D K +V +
Sbjct: 17 GVGKTCLVRKFTQGIFPPG--QSATIGVDFMIKTVKVGN 53
>AL033514-22|CAA22106.3| 1353|Caenorhabditis elegans Hypothetical
protein Y75B8A.22 protein.
Length = 1353
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +2
Query: 338 LDHFEKLYQVADKDVKLQLWDTGGMERIASVTSSYYKFAEA 460
L H + LY+ K+ L WDTG +E + + Y +A
Sbjct: 1090 LAHMDILYEKPKKEKPLPQWDTGLIEELKKLKEQYDDIPDA 1130
>AF183401-1|AAF13189.1| 1353|Caenorhabditis elegans TIM-1 protein.
Length = 1353
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +2
Query: 338 LDHFEKLYQVADKDVKLQLWDTGGMERIASVTSSYYKFAEA 460
L H + LY+ K+ L WDTG +E + + Y +A
Sbjct: 1090 LAHMDILYEKPKKEKPLPQWDTGLIEELKKLKEQYDDIPDA 1130
>AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G
protein indispensablefor equal chromosome segregation
protein.
Length = 185
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/63 (26%), Positives = 30/63 (47%)
Frame = +2
Query: 362 QVADKDVKLQLWDTGGMERIASVTSSYYKFAEAAILVFSLDNASSFHILVNIYLKLYLMQ 541
++ +V ++LWD GG R S+ Y + A +VF +D A + + + L+
Sbjct: 59 KITKGNVTIKLWDIGGQPRFRSMWERYCRGVNA--IVFMVDAADEEKLEASRNELMQLLD 116
Query: 542 KTQ 550
K Q
Sbjct: 117 KPQ 119
>AL032637-13|CAA21615.1| 709|Caenorhabditis elegans Hypothetical
protein Y43F8C.14 protein.
Length = 709
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/22 (45%), Positives = 15/22 (68%), Gaps = 2/22 (9%)
Frame = +3
Query: 456 KLQFWSFHWTMLHR--FIFWST 515
K+ W +W++LHR +FWST
Sbjct: 606 KVPIWHKYWSLLHRGAILFWST 627
>AC087079-5|ABC48240.1| 367|Caenorhabditis elegans Hypothetical
protein Y37E3.5b protein.
Length = 367
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/61 (26%), Positives = 25/61 (40%)
Frame = +2
Query: 317 DRRATLGLDHFEKLYQVADKDVKLQLWDTGGMERIASVTSSYYKFAEAAILVFSLDNASS 496
D R L + F + D+ L ++D GG + I + S+YY I V +
Sbjct: 48 DPRDLLRTNGFSTVKMEYDETFHLTIYDVGGDKGIRGIWSNYYAEVHGIIYVIDYSTDET 107
Query: 497 F 499
F
Sbjct: 108 F 108
>AC087079-4|ABC48239.1| 370|Caenorhabditis elegans Hypothetical
protein Y37E3.5a protein.
Length = 370
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/61 (26%), Positives = 25/61 (40%)
Frame = +2
Query: 317 DRRATLGLDHFEKLYQVADKDVKLQLWDTGGMERIASVTSSYYKFAEAAILVFSLDNASS 496
D R L + F + D+ L ++D GG + I + S+YY I V +
Sbjct: 48 DPRDLLRTNGFSTVKMEYDETFHLTIYDVGGDKGIRGIWSNYYAEVHGIIYVIDYSTDET 107
Query: 497 F 499
F
Sbjct: 108 F 108
>U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.1 protein.
Length = 179
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +2
Query: 365 VADKDVKLQLWDTGGMERIASVTSSYYKFAEAAILVFSLDNA 490
V + + L +WD GG ++I ++ Y F LVF +D++
Sbjct: 56 VTFQKITLTVWDVGGQKKIRALWK--YYFPNTTTLVFVVDSS 95
>U50068-6|AAB37736.2| 1079|Caenorhabditis elegans Hypothetical
protein C01G5.4 protein.
Length = 1079
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +2
Query: 359 YQVADKDVKLQLWDTGGMERIASVTSSYYKFAEAAILVFSLDNASSFHILVNIYLKL 529
Y K K+ L D ERI SVT+ Y + ++ F D + ++ I +KL
Sbjct: 491 YSSLSKGFKILLNDYDECERIQSVTTDYIRSPGITLIRFVKDVQKPINEMLEIAMKL 547
>AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical
protein Y32F6B.3 protein.
Length = 187
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/73 (23%), Positives = 31/73 (42%)
Frame = +2
Query: 263 GKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGMERIASVTSSY 442
GK+SL + F+ D T D++ + +K+ + L+DT G +
Sbjct: 16 GKTSLLVAYTKKQFL---DNYTTTVFDNWAVSVHIDNKNYAVNLFDTAGQGNYEQIRCLS 72
Query: 443 YKFAEAAILVFSL 481
Y A ++ FS+
Sbjct: 73 YPHANVFLVCFSM 85
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,740,405
Number of Sequences: 27780
Number of extensions: 353820
Number of successful extensions: 1108
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 1040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1088
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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