Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0526
         (848 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    24   1.7  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        22   5.3  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    22   5.3  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    22   7.0  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    22   7.0  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    22   7.0  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +2

Query: 80  LFSIMEKPTVTEQPPPYSAAVPPGLQPH 163
           L  I  K T  + PPP ++    GL+PH
Sbjct: 141 LDEIEVKVTGNDAPPPITSFETSGLRPH 168


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +3

Query: 714 LHIHQFDPDFLMDFDVNGNKEIPFN 788
           + + + DPDF      NG  EIP N
Sbjct: 26  IEVIETDPDFHESTMFNGGGEIPQN 50


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -3

Query: 294 WYYNVCGSVAWY 259
           WY+ +CGS   Y
Sbjct: 338 WYFQICGSAFSY 349


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/24 (33%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
 Frame = -3

Query: 342 NANSTCGASSDCDYSW-WYYNVCG 274
           N + TCG    C++ W   +N+ G
Sbjct: 368 NDDGTCGNGYGCEHRWRQIFNMVG 391


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -1

Query: 419 ARQHSIPNGKKRMAHKIPRHVKSSSK 342
           AR   +P+ KK+  H +PR V  +S+
Sbjct: 210 ARYRFMPDIKKKGLHSLPRLVLFTSE 235


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 14/45 (31%), Positives = 20/45 (44%)
 Frame = -1

Query: 326 AGQAPTVIIAGGIIMFVAP*LGTKLFVEEEHHMDYSPEVVGEKVH 192
           A +  TV+  G       P   T   +EEEH + Y  E +G  +H
Sbjct: 162 AREEATVVPEGSRTPIEIPRDYTASDLEEEHRLAYFREDLGINLH 206


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,888
Number of Sequences: 336
Number of extensions: 4330
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23451794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)