Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0526
         (848 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0688 - 5211484-5211626,5211730-5211826,5211930-5212105,521...    30   2.0  
06_01_0665 - 4855870-4855956,4856407-4856482,4856794-4856910,485...    30   2.0  
09_02_0404 - 8592872-8593231,8593735-8594004,8595551-8595964,859...    30   2.7  
07_03_1532 - 27519701-27520831                                         28   8.2  

>07_01_0688 -
           5211484-5211626,5211730-5211826,5211930-5212105,
           5212240-5212631,5212712-5212960,5213046-5213188,
           5213283-5213402,5214491-5214835
          Length = 554

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = +3

Query: 669 SLGLHVILFPNKVQYLHIHQFDPDFLMDFDVNGNKEIPFNGY 794
           ++GL V+  P  V+YLH      D  + F+ NG+  + F+ +
Sbjct: 366 NIGLEVVFTPTGVKYLHKEALKYDIGIYFEANGHGTVLFSDH 407


>06_01_0665 -
           4855870-4855956,4856407-4856482,4856794-4856910,
           4857062-4857127,4858578-4858670,4858788-4858909,
           4859810-4860365,4860485-4860628,4860698-4860831,
           4861003-4861100,4861172-4861353,4861464-4861540,
           4862083-4862305,4862580-4862745,4862836-4863040,
           4864981-4865199
          Length = 854

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = +1

Query: 313 GACPACRVGILEDDFTCLGILCAIL 387
           G CP CRV +L  DF C    CA+L
Sbjct: 40  GCCP-CRVVVLPPDFCCADAWCALL 63


>09_02_0404 -
           8592872-8593231,8593735-8594004,8595551-8595964,
           8596249-8596398
          Length = 397

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
 Frame = +3

Query: 657 NLKISLGLHVILFPNKVQYLHIHQFDP-DFL---MDFDVNGNKEIPF 785
           N  I L L  IL      Y+H  +F+P D++   +D+D  GNK+I F
Sbjct: 34  NGSICLSLKRILSSACAGYIHAEEFNPRDWIIPCLDYDERGNKKISF 80


>07_03_1532 - 27519701-27520831
          Length = 376

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 14/55 (25%), Positives = 24/55 (43%)
 Frame = -2

Query: 247 WRRSTIWTIARRWWGKRCTWRIRCLWVCMRLKPWRDCRRIRRGLLGHSWFLHYTE 83
           W +S+   +AR  +   CT +    W     K W     ++   + HSWF+ + E
Sbjct: 129 WDKSSNPYVARTIYSTSCTNKRYNYWDYQ--KAWEKVLLVQNSQMKHSWFIRFKE 181


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,587,786
Number of Sequences: 37544
Number of extensions: 418054
Number of successful extensions: 1184
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1179
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2362209084
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)