Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0525
(728 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0442 + 14040280-14040371,14040449-14040517,14041217-140413... 113 2e-25
05_03_0443 + 14057080-14057201,14058566-14058698,14058758-140587... 109 2e-24
01_06_1245 - 35693949-35694038,35694974-35695070,35695170-356952... 109 2e-24
08_02_0433 - 17114880-17114972,17115053-17115149,17115244-171153... 109 2e-24
02_05_0615 - 30364956-30365729,30365813-30366286 31 1.2
10_01_0154 - 1764554-1764727,1764829-1764927,1765710-1766172,176... 30 2.2
03_05_0493 + 24879554-24879674,24880272-24880339,24880761-24880811 30 2.2
07_03_1297 + 25587445-25587502,25587646-25587740,25588426-255886... 29 3.8
01_01_0540 + 3957622-3960903 29 3.8
05_03_0519 + 14951605-14952333 29 5.0
02_01_0177 + 1214226-1214294,1214707-1214794,1216095-1216308,121... 28 6.6
06_03_0551 - 22027441-22028224,22029015-22029344,22029510-220297... 28 8.7
>05_03_0442 +
14040280-14040371,14040449-14040517,14041217-14041329,
14043110-14043209,14044508-14044682,14044768-14044881,
14045157-14045287,14048401-14048464,14048585-14048624,
14049002-14049225,14049634-14049876,14050145-14050313,
14050569-14050873,14051325-14051511,14051622-14051775,
14052145-14052207,14052300-14052396,14052500-14052589
Length = 809
Score = 113 bits (271), Expect = 2e-25
Identities = 51/73 (69%), Positives = 67/73 (91%)
Frame = +3
Query: 39 KMVLIAATVCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVYQ 218
KMV++AA++ +KSGKALVSRQFV+M++ RIEGLLAAFPKL+ G+QHT+VETE+VRYVYQ
Sbjct: 285 KMVVLAASIISKSGKALVSRQFVDMSRIRIEGLLAAFPKLVGTGKQHTYVETENVRYVYQ 344
Query: 219 PLDKLYMLLITTR 257
P++ LY+LLIT +
Sbjct: 345 PIEGLYLLLITNK 357
Score = 92.7 bits (220), Expect = 3e-19
Identities = 43/84 (51%), Positives = 61/84 (72%)
Frame = +2
Query: 251 DKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALGYRESVNLAQV 430
+K SNILEDL+TLRL S++VPEY L E V AF L+FAFDE ++LG +E+V + QV
Sbjct: 356 NKQSNILEDLDTLRLLSKLVPEYSPSLDEEGVCKTAFELIFAFDEAISLGNKENVTVQQV 415
Query: 431 RSFVEMDSHEEKIYQAVRQTQERE 502
+ + EM+SHEEK ++ + Q++ E
Sbjct: 416 KQYCEMESHEEKAHKLMMQSKINE 439
>05_03_0443 +
14057080-14057201,14058566-14058698,14058758-14058797,
14059175-14059398,14059904-14059976,14060364-14060614,
14060892-14061060,14061307-14061611,14062023-14062209,
14062311-14062464,14063186-14063248,14063337-14063433,
14063530-14063619
Length = 635
Score = 109 bits (263), Expect = 2e-24
Identities = 49/72 (68%), Positives = 66/72 (91%)
Frame = +3
Query: 42 MVLIAATVCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVYQP 221
+V++AA++ +KSGKALVSRQFV+M++ RIEGLLAAFPKL+ G+QHT+VETE+VRYVYQP
Sbjct: 85 LVVLAASIISKSGKALVSRQFVDMSRIRIEGLLAAFPKLVGTGKQHTYVETENVRYVYQP 144
Query: 222 LDKLYMLLITTR 257
++ LY+LLIT +
Sbjct: 145 IEGLYLLLITNK 156
Score = 66.1 bits (154), Expect = 3e-11
Identities = 30/65 (46%), Positives = 43/65 (66%)
Frame = +2
Query: 308 VPEYCVQLTETEVLNQAFNLLFAFDEIVALGYRESVNLAQVRSFVEMDSHEEKIYQAVRQ 487
VPEY L E V AF L+FAFDE + LG +E+V + QV+ + EM+SHEEK ++ + Q
Sbjct: 201 VPEYSPSLDEEGVCKTAFELIFAFDEAICLGNKENVTVQQVKQYCEMESHEEKAHKLMMQ 260
Query: 488 TQERE 502
++ E
Sbjct: 261 SKINE 265
>01_06_1245 -
35693949-35694038,35694974-35695070,35695170-35695232,
35696079-35696232,35696303-35696489,35697001-35697314,
35698079-35698220,35698445-35698656,35699068-35699244,
35699589-35699628,35700056-35700155,35701731-35701804
Length = 549
Score = 109 bits (263), Expect = 2e-24
Identities = 48/72 (66%), Positives = 66/72 (91%)
Frame = +3
Query: 42 MVLIAATVCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVYQP 221
+V++AA++ +KSGKALVSRQFV+M++ RI+GLLAAFPKL+ G+QHT+VETE+VRYVYQP
Sbjct: 58 LVVLAASIISKSGKALVSRQFVDMSRIRIDGLLAAFPKLVGSGKQHTYVETENVRYVYQP 117
Query: 222 LDKLYMLLITTR 257
++ LY+LLIT +
Sbjct: 118 IEALYLLLITNK 129
Score = 58.0 bits (134), Expect = 7e-09
Identities = 26/53 (49%), Positives = 39/53 (73%)
Frame = +2
Query: 344 VLNQAFNLLFAFDEIVALGYRESVNLAQVRSFVEMDSHEEKIYQAVRQTQERE 502
V AF LLFAF E ++LG +E+V +AQV+ + EM+SHEEK+++ V Q++ E
Sbjct: 133 VCKAAFELLFAFIEAISLGNKENVTVAQVKQYCEMESHEEKLHKLVMQSKINE 185
>08_02_0433 -
17114880-17114972,17115053-17115149,17115244-17115306,
17115765-17115918,17115992-17116178,17116567-17116871,
17117638-17117803,17118261-17118652,17119032-17119208,
17119565-17119604,17119762-17119809,17122393-17122428,
17122832-17123104
Length = 676
Score = 109 bits (262), Expect = 2e-24
Identities = 53/96 (55%), Positives = 74/96 (77%), Gaps = 6/96 (6%)
Frame = +3
Query: 45 VLIAATVCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVYQPL 224
V++AA++ +KSGKALVSRQ+V+MT+ RIEGLLAAFPKL+ G+QHT++ETE+VRYVYQP+
Sbjct: 120 VVLAASIISKSGKALVSRQYVDMTRIRIEGLLAAFPKLVGNGKQHTYIETENVRYVYQPI 179
Query: 225 DKLYMLLITTR------LVTSWKIWRH*DSSAEWYQ 314
+ LY+++IT + L T I R D S +Y+
Sbjct: 180 EGLYLVVITNKQNLHSPLTTKGVICRELDLSVNFYE 215
Score = 65.3 bits (152), Expect = 5e-11
Identities = 32/72 (44%), Positives = 45/72 (62%)
Frame = +2
Query: 287 LRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALGYRESVNLAQVRSFVEMDSHEEK 466
L L + VPEYC L + V AF L+FAFDE ++LG +E V + QV+ + EMDS EE
Sbjct: 235 LNLNNVKVPEYCPSLDDDGVCKTAFELIFAFDEAISLGNKEKVTVQQVKEYCEMDSVEEM 294
Query: 467 IYQAVRQTQERE 502
Y+ + Q + +E
Sbjct: 295 EYKQMMQEKIKE 306
>02_05_0615 - 30364956-30365729,30365813-30366286
Length = 415
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 42 MVLIAATVCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMTGG 170
++L+A TVC S L +RQ+++ T AR A++ GG
Sbjct: 22 LLLVAFTVCNYSSLKLSTRQYIDGTSARSSSTRASYASGGGGG 64
>10_01_0154 -
1764554-1764727,1764829-1764927,1765710-1766172,
1766255-1766541
Length = 340
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +3
Query: 180 TFVETESVRYV--YQPLDKLYMLLITTRLVTSWKIWRH*DSSAEWYQNI 320
T + T SV Y+ + PL+ Y+L LVTS + H S +++QN+
Sbjct: 183 TTISTPSVTYLKLWSPLNGTYVLNDMPLLVTSLLVLYHVQDSGDFFQNL 231
>03_05_0493 + 24879554-24879674,24880272-24880339,24880761-24880811
Length = 79
Score = 29.9 bits (64), Expect = 2.2
Identities = 21/61 (34%), Positives = 30/61 (49%)
Frame = +3
Query: 219 PLDKLYMLLITTRLVTSWKIWRH*DSSAEWYQNIVYSSQKLKS*TRPSICYLLSTRLSLL 398
PL L L ++ L TSW +W + S W + VY ++KS TR L ++LL
Sbjct: 17 PLLLLDHTLSSSSLPTSWGVWANLGSINTW-EKCVYGDSEIKS-TRNGKVQLGIEHMNLL 74
Query: 399 G 401
G
Sbjct: 75 G 75
>07_03_1297 +
25587445-25587502,25587646-25587740,25588426-25588629,
25588843-25588959,25589084-25589212,25589591-25589717,
25590174-25590277,25590369-25590473,25590969-25591190,
25591869-25591967
Length = 419
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/56 (28%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +2
Query: 278 LETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAF-DEIVALGYRESVNLAQVRSFV 442
LE L+ +RV +Y L E + L + F L++ DE++ GY ++ + ++S++
Sbjct: 82 LELLQRIARVTKDYLGVLNE-DSLRKNFILVYELLDEVIDFGYPQTTSTEVLKSYI 136
>01_01_0540 + 3957622-3960903
Length = 1093
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/66 (25%), Positives = 28/66 (42%)
Frame = +3
Query: 78 GKALVSRQFVEMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVYQPLDKLYMLLITTR 257
G+++ S TK +L +L G + V T S+ VY P+D L+ R
Sbjct: 612 GQSMASSSSSTTTKLDATAILNVSAELTISGDAYVNVSTLSLEGVYNPVDGRMYLIGCRR 671
Query: 258 LVTSWK 275
+ W+
Sbjct: 672 IQAPWR 677
>05_03_0519 + 14951605-14952333
Length = 242
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +3
Query: 171 RQHTFVETESVRYVYQPLDKLYML 242
R HTF++ ESVR+V + D Y+L
Sbjct: 74 RIHTFIQRESVRHVIEIQDACYVL 97
>02_01_0177 +
1214226-1214294,1214707-1214794,1216095-1216308,
1216413-1216738,1216860-1217013,1217377-1217438,
1218078-1218133,1219456-1221279,1221775-1222698,
1222855-1222866
Length = 1242
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +3
Query: 201 VRYVYQPLDKLYMLLITTRLVTSWKIWRH 287
V ++++PL LY+LLI + SW WRH
Sbjct: 260 VVHIFRPL--LYVLLIKKFGIKSWTPWRH 286
>06_03_0551 - 22027441-22028224,22029015-22029344,22029510-22029778,
22030530-22031453,22037761-22038360,22040049-22040267
Length = 1041
Score = 27.9 bits (59), Expect = 8.7
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = -2
Query: 550 NLSRCNXLGVRACGR--CLAFLGLPYGLINLFLVRVHFNKRTDLR*IDAFSVPKSDNLVE 377
NL++ LGV R C F G +L + VH NK + +DA S P +NL
Sbjct: 850 NLTQLRKLGVSGISRRNCREFCSAISGHAHLESLSVHLNKENNRGCLDAISKP-PENLKS 908
Query: 376 SK 371
K
Sbjct: 909 LK 910
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,121,343
Number of Sequences: 37544
Number of extensions: 378316
Number of successful extensions: 1217
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1217
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1909952136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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