Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0525
         (728 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X81198-1|CAA57072.1|  472|Homo sapiens archain protein.               136   8e-32
X81197-1|CAA57071.1|  511|Homo sapiens archain protein.               136   8e-32
BC093638-1|AAH93638.1|  511|Homo sapiens archain protein.             136   8e-32
BC093636-1|AAH93636.1|  511|Homo sapiens archain 1 protein.           136   8e-32
BC064936-1|AAH64936.1|  189|Homo sapiens ARCN1 protein protein.       136   8e-32
M21616-1|AAA36427.1| 1106|Homo sapiens platelet-derived growth f...    31   3.2  
J03278-1|AAA60049.1| 1106|Homo sapiens platelet-derived growth f...    31   3.2  
BC032224-1|AAH32224.1| 1106|Homo sapiens platelet-derived growth...    31   3.2  
AB209657-1|BAD92894.1|  777|Homo sapiens platelet-derived growth...    31   3.2  
Y08387-1|CAA69667.1|  453|Homo sapiens mu-adaptin-related protei...    30   9.8  
BC018705-1|AAH18705.1|  453|Homo sapiens AP4M1 protein protein.        30   9.8  
AK126534-1|BAC86581.1|  528|Homo sapiens protein ( Homo sapiens ...    30   9.8  
AF155158-1|AAD43328.1|  453|Homo sapiens adaptor-related protein...    30   9.8  
AF020796-1|AAD25869.1|  453|Homo sapiens mu-adaptin-related prot...    30   9.8  

>X81198-1|CAA57072.1|  472|Homo sapiens archain protein.
          Length = 472

 Score =  136 bits (329), Expect = 8e-32
 Identities = 68/116 (58%), Positives = 86/116 (74%), Gaps = 1/116 (0%)
 Frame = +2

Query: 158 NDRRTAAYICRNRVRQICLPATR-QVVYVTDHDKASNILEDLETLRLFSRVVPEYCVQLT 334
           N  +   ++    VR +  P  +  +V +T   K SNILEDLETLRLFSRV+PEYC  L 
Sbjct: 2   NTGKQHTFVETESVRYVYQPMEKLYMVLITT--KNSNILEDLETLRLFSRVIPEYCRALE 59

Query: 335 ETEVLNQAFNLLFAFDEIVALGYRESVNLAQVRSFVEMDSHEEKIYQAVRQTQERE 502
           E E+    F+L+FAFDEIVALGYRE+VNLAQ+R+F EMDSHEEK+++AVR+TQERE
Sbjct: 60  ENEISEHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVRETQERE 115



 Score = 61.7 bits (143), Expect = 3e-09
 Identities = 26/33 (78%), Positives = 31/33 (93%)
 Frame = +3

Query: 159 MTGGRQHTFVETESVRYVYQPLDKLYMLLITTR 257
           M  G+QHTFVETESVRYVYQP++KLYM+LITT+
Sbjct: 1   MNTGKQHTFVETESVRYVYQPMEKLYMVLITTK 33


>X81197-1|CAA57071.1|  511|Homo sapiens archain protein.
          Length = 511

 Score =  136 bits (329), Expect = 8e-32
 Identities = 68/116 (58%), Positives = 86/116 (74%), Gaps = 1/116 (0%)
 Frame = +2

Query: 158 NDRRTAAYICRNRVRQICLPATR-QVVYVTDHDKASNILEDLETLRLFSRVVPEYCVQLT 334
           N  +   ++    VR +  P  +  +V +T   K SNILEDLETLRLFSRV+PEYC  L 
Sbjct: 41  NTGKQHTFVETESVRYVYQPMEKLYMVLITT--KNSNILEDLETLRLFSRVIPEYCRALE 98

Query: 335 ETEVLNQAFNLLFAFDEIVALGYRESVNLAQVRSFVEMDSHEEKIYQAVRQTQERE 502
           E E+    F+L+FAFDEIVALGYRE+VNLAQ+R+F EMDSHEEK+++AVR+TQERE
Sbjct: 99  ENEISEHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVRETQERE 154



 Score =  128 bits (310), Expect = 2e-29
 Identities = 59/72 (81%), Positives = 68/72 (94%)
 Frame = +3

Query: 42  MVLIAATVCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVYQP 221
           MVL+AA VCTK+GKA+VSRQFVEMT+ RIEGLLAAFPKLM  G+QHTFVETESVRYVYQP
Sbjct: 1   MVLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMNTGKQHTFVETESVRYVYQP 60

Query: 222 LDKLYMLLITTR 257
           ++KLYM+LITT+
Sbjct: 61  MEKLYMVLITTK 72


>BC093638-1|AAH93638.1|  511|Homo sapiens archain protein.
          Length = 511

 Score =  136 bits (329), Expect = 8e-32
 Identities = 68/116 (58%), Positives = 86/116 (74%), Gaps = 1/116 (0%)
 Frame = +2

Query: 158 NDRRTAAYICRNRVRQICLPATR-QVVYVTDHDKASNILEDLETLRLFSRVVPEYCVQLT 334
           N  +   ++    VR +  P  +  +V +T   K SNILEDLETLRLFSRV+PEYC  L 
Sbjct: 41  NTGKQHTFVETESVRYVYQPMEKLYMVLITT--KNSNILEDLETLRLFSRVIPEYCRALE 98

Query: 335 ETEVLNQAFNLLFAFDEIVALGYRESVNLAQVRSFVEMDSHEEKIYQAVRQTQERE 502
           E E+    F+L+FAFDEIVALGYRE+VNLAQ+R+F EMDSHEEK+++AVR+TQERE
Sbjct: 99  ENEISEHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVRETQERE 154



 Score =  128 bits (310), Expect = 2e-29
 Identities = 59/72 (81%), Positives = 68/72 (94%)
 Frame = +3

Query: 42  MVLIAATVCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVYQP 221
           MVL+AA VCTK+GKA+VSRQFVEMT+ RIEGLLAAFPKLM  G+QHTFVETESVRYVYQP
Sbjct: 1   MVLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMNTGKQHTFVETESVRYVYQP 60

Query: 222 LDKLYMLLITTR 257
           ++KLYM+LITT+
Sbjct: 61  MEKLYMVLITTK 72


>BC093636-1|AAH93636.1|  511|Homo sapiens archain 1 protein.
          Length = 511

 Score =  136 bits (329), Expect = 8e-32
 Identities = 68/116 (58%), Positives = 86/116 (74%), Gaps = 1/116 (0%)
 Frame = +2

Query: 158 NDRRTAAYICRNRVRQICLPATR-QVVYVTDHDKASNILEDLETLRLFSRVVPEYCVQLT 334
           N  +   ++    VR +  P  +  +V +T   K SNILEDLETLRLFSRV+PEYC  L 
Sbjct: 41  NTGKQHTFVETESVRYVYQPMEKLYMVLITT--KNSNILEDLETLRLFSRVIPEYCRALE 98

Query: 335 ETEVLNQAFNLLFAFDEIVALGYRESVNLAQVRSFVEMDSHEEKIYQAVRQTQERE 502
           E E+    F+L+FAFDEIVALGYRE+VNLAQ+R+F EMDSHEEK+++AVR+TQERE
Sbjct: 99  ENEISEHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVRETQERE 154



 Score =  128 bits (310), Expect = 2e-29
 Identities = 59/72 (81%), Positives = 68/72 (94%)
 Frame = +3

Query: 42  MVLIAATVCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVYQP 221
           MVL+AA VCTK+GKA+VSRQFVEMT+ RIEGLLAAFPKLM  G+QHTFVETESVRYVYQP
Sbjct: 1   MVLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMNTGKQHTFVETESVRYVYQP 60

Query: 222 LDKLYMLLITTR 257
           ++KLYM+LITT+
Sbjct: 61  MEKLYMVLITTK 72


>BC064936-1|AAH64936.1|  189|Homo sapiens ARCN1 protein protein.
          Length = 189

 Score =  136 bits (329), Expect = 8e-32
 Identities = 68/116 (58%), Positives = 86/116 (74%), Gaps = 1/116 (0%)
 Frame = +2

Query: 158 NDRRTAAYICRNRVRQICLPATR-QVVYVTDHDKASNILEDLETLRLFSRVVPEYCVQLT 334
           N  +   ++    VR +  P  +  +V +T   K SNILEDLETLRLFSRV+PEYC  L 
Sbjct: 41  NTGKQHTFVETESVRYVYQPMEKLYMVLITT--KNSNILEDLETLRLFSRVIPEYCRALE 98

Query: 335 ETEVLNQAFNLLFAFDEIVALGYRESVNLAQVRSFVEMDSHEEKIYQAVRQTQERE 502
           E E+    F+L+FAFDEIVALGYRE+VNLAQ+R+F EMDSHEEK+++AVR+TQERE
Sbjct: 99  ENEISEHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVRETQERE 154



 Score =  128 bits (310), Expect = 2e-29
 Identities = 59/72 (81%), Positives = 68/72 (94%)
 Frame = +3

Query: 42  MVLIAATVCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVYQP 221
           MVL+AA VCTK+GKA+VSRQFVEMT+ RIEGLLAAFPKLM  G+QHTFVETESVRYVYQP
Sbjct: 1   MVLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMNTGKQHTFVETESVRYVYQP 60

Query: 222 LDKLYMLLITTR 257
           ++KLYM+LITT+
Sbjct: 61  MEKLYMVLITTK 72


>M21616-1|AAA36427.1| 1106|Homo sapiens platelet-derived growth factor
            receptor protein.
          Length = 1106

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
 Frame = -2

Query: 661  IFSAID-SDGDDEDIVELPKPLPKDICERG---GWPRLAASNLSRCNXLGVRAC 512
            +++A+  ++GD++ I+ LP P P ++ + G   G P LA+S L+  N     +C
Sbjct: 1008 LYTAVQPNEGDNDYIIPLPDPKP-EVADEGPLEGSPSLASSTLNEVNTSSTISC 1060


>J03278-1|AAA60049.1| 1106|Homo sapiens platelet-derived growth factor
            receptor protein.
          Length = 1106

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
 Frame = -2

Query: 661  IFSAID-SDGDDEDIVELPKPLPKDICERG---GWPRLAASNLSRCNXLGVRAC 512
            +++A+  ++GD++ I+ LP P P ++ + G   G P LA+S L+  N     +C
Sbjct: 1008 LYTAVQPNEGDNDYIIPLPDPKP-EVADEGPLEGSPSLASSTLNEVNTSSTISC 1060


>BC032224-1|AAH32224.1| 1106|Homo sapiens platelet-derived growth
            factor receptor, beta polypeptide protein.
          Length = 1106

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
 Frame = -2

Query: 661  IFSAID-SDGDDEDIVELPKPLPKDICERG---GWPRLAASNLSRCNXLGVRAC 512
            +++A+  ++GD++ I+ LP P P ++ + G   G P LA+S L+  N     +C
Sbjct: 1008 LYTAVQPNEGDNDYIIPLPDPKP-EVADEGPLEGSPSLASSTLNEVNTSSTISC 1060


>AB209657-1|BAD92894.1|  777|Homo sapiens platelet-derived growth
           factor receptor beta precursor variant protein.
          Length = 777

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
 Frame = -2

Query: 661 IFSAID-SDGDDEDIVELPKPLPKDICERG---GWPRLAASNLSRCNXLGVRAC 512
           +++A+  ++GD++ I+ LP P P ++ + G   G P LA+S L+  N     +C
Sbjct: 679 LYTAVQPNEGDNDYIIPLPDPKP-EVADEGPLEGSPSLASSTLNEVNTSSTISC 731


>Y08387-1|CAA69667.1|  453|Homo sapiens mu-adaptin-related protein 2
           protein.
          Length = 453

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 13/59 (22%), Positives = 30/59 (50%)
 Frame = +2

Query: 278 LETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALGYRESVNLAQVRSFVEMDS 454
           LE L   + ++ +YC  L E  +      +    DE++  GY ++ +   +R+F++ ++
Sbjct: 80  LELLSRLATLLGDYCGSLGEGTISRNVALVYELLDEVLDYGYVQTTSTEMLRNFIQTEA 138


>BC018705-1|AAH18705.1|  453|Homo sapiens AP4M1 protein protein.
          Length = 453

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 13/59 (22%), Positives = 30/59 (50%)
 Frame = +2

Query: 278 LETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALGYRESVNLAQVRSFVEMDS 454
           LE L   + ++ +YC  L E  +      +    DE++  GY ++ +   +R+F++ ++
Sbjct: 80  LELLSRLATLLGDYCGSLGEGTISRNVALVYELLDEVLDYGYVQTTSTEMLRNFIQTEA 138


>AK126534-1|BAC86581.1|  528|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44570 fis, clone UTERU3011063, highly  similar
           to Transmembrane 9 superfamily protein member 4. ).
          Length = 528

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 18/41 (43%), Positives = 21/41 (51%)
 Frame = +1

Query: 313 RILCTAHRN*SLEPGLQFAICFRRDCRSWVQRKRQSSAGPF 435
           R  CTA    +L PG+ F ICF  +C  W   K  S A PF
Sbjct: 298 RAFCTA----TLYPGVVFGICFVLNCFIW--GKHSSGAVPF 332


>AF155158-1|AAD43328.1|  453|Homo sapiens adaptor-related protein
           complex AP-4 mu4 subunit protein.
          Length = 453

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 13/59 (22%), Positives = 30/59 (50%)
 Frame = +2

Query: 278 LETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALGYRESVNLAQVRSFVEMDS 454
           LE L   + ++ +YC  L E  +      +    DE++  GY ++ +   +R+F++ ++
Sbjct: 80  LELLSRLATLLGDYCGSLGEGTISRNVALVYELLDEVLDYGYVQTTSTEMLRNFIQTEA 138


>AF020796-1|AAD25869.1|  453|Homo sapiens mu-adaptin-related protein
           2 protein.
          Length = 453

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 13/59 (22%), Positives = 30/59 (50%)
 Frame = +2

Query: 278 LETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALGYRESVNLAQVRSFVEMDS 454
           LE L   + ++ +YC  L E  +      +    DE++  GY ++ +   +R+F++ ++
Sbjct: 80  LELLSRLATLLGDYCGSLGEGTISRNVALVYELLDEVLDYGYVQTTSTEMLRNFIQTEA 138


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,630,095
Number of Sequences: 237096
Number of extensions: 1926433
Number of successful extensions: 4873
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4873
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8623170556
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)