Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0523
         (767 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0043 + 19185969-19186036,19186205-19187342                       28   9.4  
01_05_0353 + 21278753-21278884,21279482-21279535,21279912-212799...    28   9.4  

>02_04_0043 + 19185969-19186036,19186205-19187342
          Length = 401

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = +3

Query: 462 RCIVHRH*RW*SHQSCNVASNEGVFDASVDEYSKNPVRTAVISE 593
           R  ++RH RW S   C ++S E  FD S+  Y +N    A + E
Sbjct: 192 RAFIYRHGRWSSVSFCLLSSLEWAFD-SICTYLQNERLRAGLEE 234


>01_05_0353 +
           21278753-21278884,21279482-21279535,21279912-21279991,
           21280099-21280361,21280837-21280958
          Length = 216

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
 Frame = -3

Query: 366 KRRYRFIHQRMGLYEVNDFIGKSPTV---LHARTGPGL 262
           ++R R IH    L+ V+D IGKS  +   +HAR G G+
Sbjct: 33  QQRGRLIHAHDILHNVDDNIGKSRRIIGAMHARFGLGI 70


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,293,459
Number of Sequences: 37544
Number of extensions: 418739
Number of successful extensions: 936
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 936
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2063219900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)