Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0523
         (767 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    27   0.19 
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   9.5  

>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 27.1 bits (57), Expect = 0.19
 Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
 Frame = -3

Query: 510 YSFDDST--IVSADVQYIVFVSIHCLNLRMNGNSGKSVLQTDSNQ 382
           ++FDD    I+ A+V+ ++  + HC+N   N N   +  Q D+NQ
Sbjct: 391 FNFDDVNFRILGANVKELIR-NTHCVNNNQNDNIQNTNNQNDNNQ 434


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 9/42 (21%), Positives = 21/42 (50%)
 Frame = -1

Query: 578 GPHRIFAILIYARVKNAFVRGNITALMTLPSSVPMYNTSYLF 453
           GP  +  +++ A V    V GN+  ++ +  +  + N + +F
Sbjct: 62  GPWILVTLIVLAIVNVMVVLGNVLVILAVYHTSKLRNVTNMF 103


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,758
Number of Sequences: 438
Number of extensions: 5078
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24032646
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)