Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0521
         (734 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    25   0.48 
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    25   0.48 
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      25   0.63 
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       23   3.4  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   3.4  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   3.4  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   5.9  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   5.9  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   7.8  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   7.8  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   7.8  

>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 25.4 bits (53), Expect = 0.48
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 79  VFYNCSAGRRARPPCGPGASPQR 147
           VF+NC  G  +R  C PG +  R
Sbjct: 110 VFWNCWNGEASRYQCSPGLAYDR 132


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 25.4 bits (53), Expect = 0.48
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 79  VFYNCSAGRRARPPCGPGASPQR 147
           VF+NC  G  +R  C PG +  R
Sbjct: 110 VFWNCWNGEASRYQCSPGLAYDR 132


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 25.0 bits (52), Expect = 0.63
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +3

Query: 129 WGFAPTRLVARVW 167
           W FAP R VA++W
Sbjct: 260 WAFAPIRWVAKLW 272


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 188 RDHGARAPDARDETRWGE 135
           +  GA APDAR +  W +
Sbjct: 85  KQSGAAAPDARTQRVWSQ 102


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = -3

Query: 471 ISSPGITAYSQYVATCSGPFPPLPAASCPSCRAKTASP 358
           ISSPG  +    + +  G   P P+ S  S     ASP
Sbjct: 681 ISSPGALSGLSSLTSPGGMVLPSPSTSVASPSVSVASP 718


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = -3

Query: 471 ISSPGITAYSQYVATCSGPFPPLPAASCPSCRAKTASP 358
           ISSPG  +    + +  G   P P+ S  S     ASP
Sbjct: 573 ISSPGALSGLSSLTSPGGMVLPSPSTSVASPSVSVASP 610


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -2

Query: 484 EPEPDLLSRYN 452
           EP+P+LL RY+
Sbjct: 37  EPDPELLDRYD 47


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -2

Query: 484 EPEPDLLSRYN 452
           EP+P+LL RY+
Sbjct: 37  EPDPELLDRYD 47


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -3

Query: 447 YSQYVATCSGPFPPLPAASCP 385
           Y  YVAT    F  +P   CP
Sbjct: 272 YLYYVATGKASFVTVPMIVCP 292


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -3

Query: 447 YSQYVATCSGPFPPLPAASCP 385
           Y  YVAT    F  +P   CP
Sbjct: 272 YLYYVATGKASFVTVPMIVCP 292


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 396 LLEVEEKDPNRWRH 437
           LLE  + DP+RW++
Sbjct: 77  LLEFVQIDPHRWKY 90


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,459
Number of Sequences: 336
Number of extensions: 3249
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)