Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0521
(734 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0349 + 9237537-9238334 36 0.033
05_03_0471 - 14455543-14455650,14455925-14456002,14456121-144562... 33 0.31
03_05_0562 + 25648581-25648841,25650243-25650626 30 1.7
06_03_0383 - 20154045-20154712,20154969-20155122,20155780-201558... 29 2.9
02_05_1347 + 35837967-35838060,35838524-35838783 29 2.9
01_06_1161 + 35002125-35002414,35002511-35002648,35003658-35004357 29 2.9
05_05_0149 - 22733703-22736216 29 3.8
11_04_0287 + 15796081-15796206,15796298-15796756 29 5.1
05_07_0081 - 27572047-27572925,27573285-27573419 29 5.1
04_03_0238 - 13193508-13193946,13194010-13194062 29 5.1
03_06_0702 + 35626836-35627712,35627820-35627992,35629318-35629584 29 5.1
03_06_0458 - 34077649-34077849,34077956-34078127,34078803-34079290 29 5.1
01_07_0306 + 42638683-42638990,42639074-42639314,42639935-426402... 29 5.1
09_02_0181 - 5425833-5426527,5426667-5429397 28 6.7
09_02_0082 - 4060018-4061604 28 6.7
04_04_1694 - 35419278-35419565,35419744-35419861,35420404-354204... 28 6.7
04_04_1115 + 31008213-31008707,31009385-31009689,31010848-310111... 28 6.7
03_05_0267 - 22538631-22539452 28 6.7
03_02_0707 + 10569261-10571276 28 6.7
03_01_0245 + 1916718-1917443,1917534-1917719 28 6.7
01_06_1382 - 36856606-36857484,36857962-36858066,36858932-36859546 28 6.7
09_03_0089 + 12265916-12267232 28 8.8
09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817 28 8.8
05_04_0005 + 17063717-17063866,17065737-17065855,17066903-170672... 28 8.8
04_03_0789 + 19660713-19660896,19661405-19662027 28 8.8
02_05_0868 + 32342967-32343915,32344389-32344447 28 8.8
02_02_0316 - 8878540-8878605,8880040-8880732,8881270-8881758 28 8.8
>02_02_0349 + 9237537-9238334
Length = 265
Score = 35.9 bits (79), Expect = 0.033
Identities = 18/35 (51%), Positives = 19/35 (54%)
Frame = -1
Query: 200 SGILRDHGARAPDARDETRWGEAPGPHGGRARRPA 96
SG LR GA + R E R GE PHGGR R A
Sbjct: 43 SGGLRTGGAALAEGRKEKRLGEKAAPHGGRKRERA 77
>05_03_0471 -
14455543-14455650,14455925-14456002,14456121-14456285,
14457151-14457261,14457863-14458024,14458462-14458538,
14459526-14460177
Length = 450
Score = 32.7 bits (71), Expect = 0.31
Identities = 28/79 (35%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = -3
Query: 555 GCGSGAGTGDLDFRGGEETWNAGVSPSRISSPGITAYSQYVATC-SGPFPPLPAASCPSC 379
G G+GAG G G + S S + + A +Y SG P P A PS
Sbjct: 14 GAGTGAGAGGAASPSGLRRYGFRFSASSLLQAPLAALLEYSGVVPSG--PGAPQAGPPS- 70
Query: 378 RAKTASPSSSRYRSLYDGL 322
A ++SPSSS S DGL
Sbjct: 71 -ALSSSPSSSSSSSEADGL 88
>03_05_0562 + 25648581-25648841,25650243-25650626
Length = 214
Score = 30.3 bits (65), Expect = 1.7
Identities = 21/45 (46%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = -3
Query: 576 YVGAR--E*GCGSGAGTGDLDFRGGEETWNAGVSPSRISSPGITA 448
Y+G R GCG G G G GG T G SPS +SSP TA
Sbjct: 150 YIGRRLRARGCGGGGGGG-----GGSTTTTTG-SPSSMSSPAKTA 188
>06_03_0383 -
20154045-20154712,20154969-20155122,20155780-20155896,
20157395-20157466
Length = 336
Score = 29.5 bits (63), Expect = 2.9
Identities = 22/69 (31%), Positives = 29/69 (42%)
Frame = -3
Query: 552 CGSGAGTGDLDFRGGEETWNAGVSPSRISSPGITAYSQYVATCSGPFPPLPAASCPSCRA 373
CG AG D GG A VS +R S I S+ A+ PP P P+ A
Sbjct: 262 CGC-AGAADGGRGGGRGPTTAAVSTAR-GSAAIDTSSRASASAHASRPPAPPTMEPAMEA 319
Query: 372 KTASPSSSR 346
+ P++ R
Sbjct: 320 ASLGPNTVR 328
>02_05_1347 + 35837967-35838060,35838524-35838783
Length = 117
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -2
Query: 232 SIHCVGTTSSIAGYYEITEQGLQT 161
S+HC T + AG YE+TE+ + T
Sbjct: 19 SLHCTATGRTWAGEYELTEENVHT 42
>01_06_1161 + 35002125-35002414,35002511-35002648,35003658-35004357
Length = 375
Score = 29.5 bits (63), Expect = 2.9
Identities = 24/69 (34%), Positives = 28/69 (40%), Gaps = 2/69 (2%)
Frame = +2
Query: 263 PLTHGQKPTTFTNN*SFKSGRPSXXXXXXXXXGEAVFARQLGQEAAGSGGKGPEQVATY- 439
P T G PTT T+ S P G +F+R L A G GG E+ A
Sbjct: 193 PNTAGSSPTT-TSRQRQSSSSPPAEMLDLTMNGAGLFSRLLLPHAVGGGGSAAEEEAAIV 251
Query: 440 -WL*AVIPG 463
L AVI G
Sbjct: 252 TCLAAVISG 260
>05_05_0149 - 22733703-22736216
Length = 837
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 240 GSRGCSKNRLHMDRNPQ-HSRITDPSNPAGRRKEIDNVMKK 359
GSRG S+ + + Q H RIT N ++EID + K+
Sbjct: 108 GSRGASRGTSPVPKRTQMHRRITSHMNKENAQEEIDKLQKQ 148
>11_04_0287 + 15796081-15796206,15796298-15796756
Length = 194
Score = 28.7 bits (61), Expect = 5.1
Identities = 21/75 (28%), Positives = 28/75 (37%)
Frame = -3
Query: 549 GSGAGTGDLDFRGGEETWNAGVSPSRISSPGITAYSQYVATCSGPFPPLPAASCPSCRAK 370
G G GT DL R T A +P R + G+ + C F LP+
Sbjct: 58 GGGGGTQDLPSRMRSRTETAAAAPERSHADGV----KDSGGCGCRFRALPSRMGSRIVTA 113
Query: 369 TASPSSSRYRSLYDG 325
+P SR + DG
Sbjct: 114 VGAPEPSRVDGVEDG 128
>05_07_0081 - 27572047-27572925,27573285-27573419
Length = 337
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -3
Query: 411 PPLPAASCPSCRAKTASPSSSRYRSLYDGLPDLKD 307
P A S S R + + +SSR+ S Y GLP D
Sbjct: 120 PTTTAMSSSSARVRAGASASSRWPSSYPGLPPRHD 154
>04_03_0238 - 13193508-13193946,13194010-13194062
Length = 163
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 409 RKRTRTGGDILAISSYTWRGDPARAHPG 492
RK R GGD ++SY + G PAR G
Sbjct: 114 RKNGRLGGDDFRLASYVFDGMPARKERG 141
>03_06_0702 + 35626836-35627712,35627820-35627992,35629318-35629584
Length = 438
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -3
Query: 450 AYSQYVATCSGPFPPLPAASCPSCRAKTASPSSS 349
++ +Y S PPLPAA P A A P S+
Sbjct: 41 SFIRYATAISDDLPPLPAADQPPNLADVAEPEST 74
>03_06_0458 - 34077649-34077849,34077956-34078127,34078803-34079290
Length = 286
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = +1
Query: 439 LAISSYTWRGDPARAHPGVPGLLPASEV*I---SSTGAGPAALFA 564
LA+S+ T GDPA P P L P + + + SS+G G LF+
Sbjct: 69 LAVSATTKNGDPAET-PHAPPLPPPASIKLPSSSSSGGGECDLFS 112
>01_07_0306 +
42638683-42638990,42639074-42639314,42639935-42640236,
42640431-42640607,42640853-42641617,42641697-42641791,
42641889-42641951,42642047-42642135,42642229-42642324,
42642457-42643104,42643596-42643628,42643838-42643912,
42644442-42644603,42644604-42644674,42644758-42644815,
42645196-42645394,42645487-42645552,42645699-42646183
Length = 1310
Score = 28.7 bits (61), Expect = 5.1
Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 6/71 (8%)
Frame = -3
Query: 513 GGEETWNAGVSPSRISSPGITAYSQYVATCSGPFPPL------PAASCPSCRAKTASPSS 352
GG + W S ++ S G TA + T SG PP+ P + RA SP S
Sbjct: 386 GGIDEWEETPSTNKSSPLGGTANRKRPMTASGSSPPVAWVGQRPQKMSRTRRANVVSPVS 445
Query: 351 SRYRSLYDGLP 319
+ L +G P
Sbjct: 446 NFDEGLSEGSP 456
>09_02_0181 - 5425833-5426527,5426667-5429397
Length = 1141
Score = 28.3 bits (60), Expect = 6.7
Identities = 20/69 (28%), Positives = 29/69 (42%)
Frame = -3
Query: 552 CGSGAGTGDLDFRGGEETWNAGVSPSRISSPGITAYSQYVATCSGPFPPLPAASCPSCRA 373
C +GA G+ + W AG + ++S T VA + P P LP A CR
Sbjct: 1049 CPAGAAGGETG-SATDAVWAAGGATRALASAAATRVG--VAAATAPAPALPRAPA-RCRC 1104
Query: 372 KTASPSSSR 346
+ A +R
Sbjct: 1105 RMACRRKAR 1113
>09_02_0082 - 4060018-4061604
Length = 528
Score = 28.3 bits (60), Expect = 6.7
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 7/59 (11%)
Frame = -3
Query: 480 PSRISSPGIT--AYSQYVATCSGPFPPLPAASCPSCRAK-----TASPSSSRYRSLYDG 325
P +S P T + +V T P PP+P P+ A T SP+ +RY YDG
Sbjct: 167 PRVLSPPAPTPPVLATHVPTPPAPAPPVPTPLAPAPPADVPPGFTVSPTITRYSFGYDG 225
>04_04_1694 -
35419278-35419565,35419744-35419861,35420404-35420490,
35420909-35420931,35421647-35421843,35421964-35422159,
35422382-35422481,35423288-35423374,35424053-35424282,
35424678-35424763,35425148-35425271,35425415-35428573,
35430014-35430019
Length = 1566
Score = 28.3 bits (60), Expect = 6.7
Identities = 26/92 (28%), Positives = 37/92 (40%), Gaps = 7/92 (7%)
Frame = -3
Query: 555 GCGSGAGTGDLDF----RGGEETWNAGVSPSRISSPGITAYSQYVAT---CSGPFPPLPA 397
G G+G G G L+ +G W G S ++ + +GP PP P
Sbjct: 154 GNGNGNGNGGLELDAALQGFVAYWQGGGSSLSVTDADLFHDMMQPTPPQHSAGPPPPPPP 213
Query: 396 ASCPSCRAKTASPSSSRYRSLYDGLPDLKDQL 301
A+ C A AS S+S + D LP + L
Sbjct: 214 AAAGMCTALAASSSNS---GVEDPLPSYMEAL 242
>04_04_1115 +
31008213-31008707,31009385-31009689,31010848-31011108,
31011193-31011401,31011490-31011783,31011861-31011901,
31011987-31012055,31012164-31012264,31012351-31012435,
31012539-31012637,31012731-31012799,31012909-31013040,
31013128-31013222,31013340-31013421
Length = 778
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = -3
Query: 486 VSPSRISSPGITAYSQYVATCSGPFPPLPAASCPSCRAKTASPSSSRYRSL 334
V P R+SSP + Q +++ PF SC A A+P++S R++
Sbjct: 362 VEPGRLSSPDSSINGQLLSSVPSPF----KTSCTMSSANYATPAASWNRAI 408
>03_05_0267 - 22538631-22539452
Length = 273
Score = 28.3 bits (60), Expect = 6.7
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Frame = -3
Query: 555 GCGSGAGTGDLDFRGGEETWNAGVSPSRISSPGITAYSQYVATCSGPFPPLPAASCPS-- 382
GCG G+G G+L GG P+R + S + P P +S PS
Sbjct: 152 GCGDGSGGGELG--GGPTVRRRASPPARPRWWPCSPSSPPASPSPSPARTSPPSSSPSRG 209
Query: 381 CRAKTASPS 355
C A+ +PS
Sbjct: 210 CSARRPTPS 218
>03_02_0707 + 10569261-10571276
Length = 671
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +2
Query: 167 EPLLRDLVISRYRGCRPDAMDRCLGQSRLLEKPLTHGQKPTTF 295
+P++ DL +SRY + +D C +L K + Q + F
Sbjct: 313 KPVILDLPLSRYNDTQIGKIDHCCRNGTILPKSMDETQSKSAF 355
>03_01_0245 + 1916718-1917443,1917534-1917719
Length = 303
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -3
Query: 552 CGSGAGTGDLDFRGGEETWNAGVSPSRISSP 460
CGSG G GD + RG T + +P +P
Sbjct: 70 CGSGGGGGDNNLRGRSSTTTSARTPRTPKTP 100
>01_06_1382 - 36856606-36857484,36857962-36858066,36858932-36859546
Length = 532
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 362 EAVFARQLGQEAAGSGGKGPEQVATY 439
E F QL +E SGGK P +VA Y
Sbjct: 465 EITFLNQLPKELTCSGGKSPIEVANY 490
>09_03_0089 + 12265916-12267232
Length = 438
Score = 27.9 bits (59), Expect = 8.8
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -3
Query: 492 AGVSPSRISSPGITAYSQYVATCSGPFPPLPAASCPSCRAKTASPSSS 349
AG S + + ++Q + T + PFPP ++S S T++PSSS
Sbjct: 204 AGDPASSLPPYLLRPFAQKLPTAASPFPPYTSSS-SSTPLSTSTPSSS 250
>09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817
Length = 883
Score = 27.9 bits (59), Expect = 8.8
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Frame = -3
Query: 465 SPGITAYSQYVATCSGPFPPLPAASCPSCR----AKTASPSSSRYRSLYDG 325
+P +A + +V T P PP+P P+ T SP+ +RY YDG
Sbjct: 285 APMPSALATHVPTPPAPAPPVPTPLAPTPADVPPGFTMSPTITRYSFGYDG 335
>05_04_0005 +
17063717-17063866,17065737-17065855,17066903-17067218,
17067579-17067722,17067909-17067926,17068853-17068954,
17069358-17069461,17069543-17069669,17069809-17069961,
17070261-17070361,17070538-17070739,17071245-17071469
Length = 586
Score = 27.9 bits (59), Expect = 8.8
Identities = 31/112 (27%), Positives = 43/112 (38%), Gaps = 1/112 (0%)
Frame = -3
Query: 564 RE*GCGSGAGTGDLDFRGGEETWNAGVSPSRISSPGITAYSQYVATCSGPFPPLPAASCP 385
R GC G G + +RGG W S S+ S+ G+ + A S FP PA
Sbjct: 34 RRGGCSGGDGAVEARWRGGGRMW----SSSQASTRGVIEVGRVEAGPS-HFPKRPAPR-N 87
Query: 384 SCRAKTASPSSSRYRSLYDGLPDLKDQLFVNVVGFCPCVSGFSSS-LDCPRH 232
S R + + + S+ Q + C C G+SS L RH
Sbjct: 88 SSRVNLSRTYAIKSCSVSSRTGLCLGQCYHKKSSACKCKLGWSSQPLSSLRH 139
>04_03_0789 + 19660713-19660896,19661405-19662027
Length = 268
Score = 27.9 bits (59), Expect = 8.8
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = -3
Query: 543 GAGTGDLDFRGGEETWNAGVSPSRISSPGITAYSQYVATCSGPFPPLPAASCPSCRAKTA 364
G G + F G ++ VS S S+P I +S +GP P+P++ S A +
Sbjct: 186 GVGGSYMPFGGAATMSSSTVSSS--SAPQILDFSTQQLIRAGPPSPMPSSGSGSATAAAS 243
Query: 363 SPSSS 349
S +S+
Sbjct: 244 STTSA 248
>02_05_0868 + 32342967-32343915,32344389-32344447
Length = 335
Score = 27.9 bits (59), Expect = 8.8
Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -1
Query: 629 ELPRSADWTAPYRAPSRAMSGRANRAAGPAPVLEI*TSEAGRR-PGTPG*ARAGS 468
E P A +R P+ A+ GRA R GPAP + RR P P AR S
Sbjct: 87 EAPPVAAPGRAFRQPAPAVPGRAFRQPGPAPAPSPAPAPPRRRMPSPPPVARRPS 141
>02_02_0316 - 8878540-8878605,8880040-8880732,8881270-8881758
Length = 415
Score = 27.9 bits (59), Expect = 8.8
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = -3
Query: 486 VSPSRISSPGITAYSQYVATCSGPFPPLPAASCPSCR-AKTASPS 355
+SP R +PG + Y+++ A + PP PAA+ SC A + SP+
Sbjct: 234 ISP-RTPTPG-SPYNKHAAAAATARPPHPAAATSSCSVAYSMSPA 276
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,891,839
Number of Sequences: 37544
Number of extensions: 470735
Number of successful extensions: 2249
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 2054
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2243
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1933531792
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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