Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0521
         (734 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79755-10|CAB02109.1| 2034|Caenorhabditis elegans Hypothetical p...    30   1.5  
U57652-1|AAB02243.1| 2034|Caenorhabditis elegans FER-1 protein.        30   1.5  
AL132952-5|CAB61137.1|  498|Caenorhabditis elegans Hypothetical ...    30   2.0  
AL032658-2|CAA21744.1|  687|Caenorhabditis elegans Hypothetical ...    29   2.6  
Z98866-15|CAB11554.2|  335|Caenorhabditis elegans Hypothetical p...    29   3.4  
Z98866-13|CAB11552.1|  327|Caenorhabditis elegans Hypothetical p...    29   3.4  
Z79756-9|CAK12562.1|  830|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z79756-8|CAB02122.1|  891|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z79756-7|CAK12561.1|  855|Caenorhabditis elegans Hypothetical pr...    29   3.4  
U61944-4|AAB03120.1|  891|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z69790-3|CAD56579.1| 1234|Caenorhabditis elegans Hypothetical pr...    28   6.0  
Z69790-2|CAA93653.2| 1271|Caenorhabditis elegans Hypothetical pr...    28   6.0  
AF339882-1|AAK14396.1| 1329|Caenorhabditis elegans attractin pro...    28   6.0  
AF067608-3|AAC17655.2|  302|Caenorhabditis elegans Hypothetical ...    28   6.0  
Z83230-10|CAL22704.2|  714|Caenorhabditis elegans Hypothetical p...    28   7.9  
AL021481-9|CAA16332.3|  714|Caenorhabditis elegans Hypothetical ...    28   7.9  
AF047663-7|AAC04448.1|  178|Caenorhabditis elegans Hypothetical ...    28   7.9  

>Z79755-10|CAB02109.1| 2034|Caenorhabditis elegans Hypothetical
            protein F43G9.6 protein.
          Length = 2034

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 16/55 (29%), Positives = 26/55 (47%)
 Frame = +3

Query: 267  LHMDRNPQHSRITDPSNPAGRRKEIDNVMKKARQSSPGSWDRKLLEVEEKDPNRW 431
            LH+  N + + +      AG+    D   ++    S GSWD + LE  EK+  +W
Sbjct: 1547 LHVFENEEIAMLNSQRQKAGKENFSDGSDQQNEDVSDGSWDEEDLE-REKEKLKW 1600


>U57652-1|AAB02243.1| 2034|Caenorhabditis elegans FER-1 protein.
          Length = 2034

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 16/55 (29%), Positives = 26/55 (47%)
 Frame = +3

Query: 267  LHMDRNPQHSRITDPSNPAGRRKEIDNVMKKARQSSPGSWDRKLLEVEEKDPNRW 431
            LH+  N + + +      AG+    D   ++    S GSWD + LE  EK+  +W
Sbjct: 1547 LHVFENEEIAMLNSQRQKAGKENFSDGSDQQNEDVSDGSWDEEDLE-REKEKLKW 1600


>AL132952-5|CAB61137.1|  498|Caenorhabditis elegans Hypothetical
           protein Y51H4A.5 protein.
          Length = 498

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -3

Query: 297 VNVVGFCPCVSGFSSSLDCP 238
           VN  GF PC +  S SL+CP
Sbjct: 205 VNECGFSPCATSISKSLNCP 224


>AL032658-2|CAA21744.1|  687|Caenorhabditis elegans Hypothetical
           protein Y76A2B.3 protein.
          Length = 687

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +1

Query: 442 AISSYTWRGDPARAHPGVP 498
           A++++TW GDP+  H G P
Sbjct: 452 ALATFTWMGDPSTGHCGAP 470


>Z98866-15|CAB11554.2|  335|Caenorhabditis elegans Hypothetical
           protein Y49E10.18 protein.
          Length = 335

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -3

Query: 297 VNVVGFCPCVSGFSSSLDCP 238
           VN  GF PC++  S +L+CP
Sbjct: 38  VNECGFSPCLTSISKALNCP 57


>Z98866-13|CAB11552.1|  327|Caenorhabditis elegans Hypothetical
           protein Y49E10.16 protein.
          Length = 327

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -3

Query: 297 VNVVGFCPCVSGFSSSLDCP 238
           VN  GF PCV+  + +L+CP
Sbjct: 33  VNACGFTPCVTTITKALNCP 52


>Z79756-9|CAK12562.1|  830|Caenorhabditis elegans Hypothetical
           protein F53C11.5c protein.
          Length = 830

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
 Frame = -3

Query: 480 PSRISSPGITAYSQYVATCSGPFPPLPAASCPSCRAKTASP-SSSRYRSLYDGLPDLKDQ 304
           PS + +PG +       T +   PP  A + P   + +ASP +SSR+     G  D   +
Sbjct: 434 PSALPAPGFSRQISSATTLTAQAPPPQALTSPRTPSTSASPRTSSRFDRSGGGGSDFLQE 493

Query: 303 L 301
           L
Sbjct: 494 L 494


>Z79756-8|CAB02122.1|  891|Caenorhabditis elegans Hypothetical
           protein F53C11.5b protein.
          Length = 891

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
 Frame = -3

Query: 480 PSRISSPGITAYSQYVATCSGPFPPLPAASCPSCRAKTASP-SSSRYRSLYDGLPDLKDQ 304
           PS + +PG +       T +   PP  A + P   + +ASP +SSR+     G  D   +
Sbjct: 495 PSALPAPGFSRQISSATTLTAQAPPPQALTSPRTPSTSASPRTSSRFDRSGGGGSDFLQE 554

Query: 303 L 301
           L
Sbjct: 555 L 555


>Z79756-7|CAK12561.1|  855|Caenorhabditis elegans Hypothetical
           protein F53C11.5a protein.
          Length = 855

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
 Frame = -3

Query: 480 PSRISSPGITAYSQYVATCSGPFPPLPAASCPSCRAKTASP-SSSRYRSLYDGLPDLKDQ 304
           PS + +PG +       T +   PP  A + P   + +ASP +SSR+     G  D   +
Sbjct: 459 PSALPAPGFSRQISSATTLTAQAPPPQALTSPRTPSTSASPRTSSRFDRSGGGGSDFLQE 518

Query: 303 L 301
           L
Sbjct: 519 L 519


>U61944-4|AAB03120.1|  891|Caenorhabditis elegans Hypothetical
           protein T12E12.2 protein.
          Length = 891

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 24/77 (31%), Positives = 30/77 (38%), Gaps = 3/77 (3%)
 Frame = -3

Query: 549 GSGAGTGDLDFRGGEETWNAGVSPSRISSPGITAYSQYVATCSGPFPPLPAASCPSCRAK 370
           G G+    +  R G  T  +G S S +S+PGIT               +  AS P C   
Sbjct: 164 GVGSRIPKISDREGAGT--SGQSSSNVSTPGITPLDNKTPRMQKKSNEIGQASTPECAIA 221

Query: 369 TAS---PSSSRYRSLYD 328
           T S   P  S   S YD
Sbjct: 222 TLSIGTPQPSIIDSTYD 238


>Z69790-3|CAD56579.1| 1234|Caenorhabditis elegans Hypothetical protein
            F33C8.1b protein.
          Length = 1234

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 19/69 (27%), Positives = 26/69 (37%)
 Frame = -3

Query: 552  CGSGAGTGDLDFRGGEETWNAGVSPSRISSPGITAYSQYVATCSGPFPPLPAASCPSCRA 373
            C  G  TG L+ +    TW     P+   +   T +     T  G FPP+    C SC+ 
Sbjct: 882  CIRGTSTGPLEPKPENSTWYFIDCPACQCNGHSTCF-----TSVGSFPPVTIEKCQSCQN 936

Query: 372  KTASPSSSR 346
             T      R
Sbjct: 937  HTTGAHCER 945


>Z69790-2|CAA93653.2| 1271|Caenorhabditis elegans Hypothetical protein
            F33C8.1a protein.
          Length = 1271

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 19/69 (27%), Positives = 26/69 (37%)
 Frame = -3

Query: 552  CGSGAGTGDLDFRGGEETWNAGVSPSRISSPGITAYSQYVATCSGPFPPLPAASCPSCRA 373
            C  G  TG L+ +    TW     P+   +   T +     T  G FPP+    C SC+ 
Sbjct: 919  CIRGTSTGPLEPKPENSTWYFIDCPACQCNGHSTCF-----TSVGSFPPVTIEKCQSCQN 973

Query: 372  KTASPSSSR 346
             T      R
Sbjct: 974  HTTGAHCER 982


>AF339882-1|AAK14396.1| 1329|Caenorhabditis elegans attractin protein.
          Length = 1329

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 19/69 (27%), Positives = 26/69 (37%)
 Frame = -3

Query: 552  CGSGAGTGDLDFRGGEETWNAGVSPSRISSPGITAYSQYVATCSGPFPPLPAASCPSCRA 373
            C  G  TG L+ +    TW     P+   +   T +     T  G FPP+    C SC+ 
Sbjct: 919  CIRGTSTGPLEPKPENSTWYFIDCPACQCNGHSTCF-----TSVGSFPPVTIEKCQSCQN 973

Query: 372  KTASPSSSR 346
             T      R
Sbjct: 974  HTTGAHCER 982


>AF067608-3|AAC17655.2|  302|Caenorhabditis elegans Hypothetical
           protein B0511.7 protein.
          Length = 302

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = +1

Query: 466 GDPARAHPGVPGLLPASEV*IS--STGAGPAALFARPDIALEGAL 594
           GDP R+ P    + P  E+  +  S+  GP AL A PD+ L G L
Sbjct: 216 GDPKRSEPPRKIVRPGRELMSAPLSSTFGPMALNAAPDLELYGKL 260


>Z83230-10|CAL22704.2|  714|Caenorhabditis elegans Hypothetical
           protein Y43F4B.3 protein.
          Length = 714

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 18/44 (40%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
 Frame = -3

Query: 330 DGLPDLKDQLFVNVVGFCPCVSGFSSSLDCPRHRSIASG-RHPL 202
           DG  D  D    N      C      SLDCPR RS+  G +HPL
Sbjct: 507 DGKVDFTDFKIDNARIVMECSDACGCSLDCPR-RSLQRGQQHPL 549


>AL021481-9|CAA16332.3|  714|Caenorhabditis elegans Hypothetical
           protein Y43F4B.3 protein.
          Length = 714

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 18/44 (40%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
 Frame = -3

Query: 330 DGLPDLKDQLFVNVVGFCPCVSGFSSSLDCPRHRSIASG-RHPL 202
           DG  D  D    N      C      SLDCPR RS+  G +HPL
Sbjct: 507 DGKVDFTDFKIDNARIVMECSDACGCSLDCPR-RSLQRGQQHPL 549


>AF047663-7|AAC04448.1|  178|Caenorhabditis elegans Hypothetical
           protein W09G12.6 protein.
          Length = 178

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = -1

Query: 578 AMSGRANRAAGPAPVLEI*TSEAGRRPGTPG*ARAG 471
           A S  +++AA PA    I +S+AG   G+P  A AG
Sbjct: 58  AASAGSSQAASPAGASAIGSSQAGSSAGSPAAAAAG 93


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,226,703
Number of Sequences: 27780
Number of extensions: 328143
Number of successful extensions: 1049
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1048
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)