Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0520
         (688 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   4.1  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   9.5  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   9.5  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   9.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.5  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/17 (52%), Positives = 14/17 (82%)
 Frame = +1

Query: 163 KGSQVEDSPVSRLLKEK 213
           +G+QVE SPV+ L +E+
Sbjct: 599 EGNQVEGSPVTSLNREE 615


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 14/55 (25%), Positives = 23/55 (41%)
 Frame = -3

Query: 251 STSRPHIFTQSSVFSFSNRLTGESSTWEPFIRDSNRN*LRVYVTIVVAGLRREGG 87
           S++RP       V    N  +G+ +     I   N   +R+YV  V+  +   GG
Sbjct: 69  SSNRPWWERYQPVSYILNTRSGDEAALADMISRCNAVGVRIYVDTVINHMTGMGG 123


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 14/55 (25%), Positives = 23/55 (41%)
 Frame = -3

Query: 251 STSRPHIFTQSSVFSFSNRLTGESSTWEPFIRDSNRN*LRVYVTIVVAGLRREGG 87
           S++RP       V    N  +G+ +     I   N   +R+YV  V+  +   GG
Sbjct: 70  SSNRPWWERYQPVSYILNTRSGDETALADMISRCNAVGVRIYVDTVINHMTGMGG 124


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 14/55 (25%), Positives = 23/55 (41%)
 Frame = -3

Query: 251 STSRPHIFTQSSVFSFSNRLTGESSTWEPFIRDSNRN*LRVYVTIVVAGLRREGG 87
           S++RP       V    N  +G+ +     I   N   +R+YV  V+  +   GG
Sbjct: 70  SSNRPWWERYQPVSYILNTRSGDEAALADMISRCNAVGVRIYVDTVINHMTGMGG 124


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 61   NLPREATTPPPSRLSPATTIVT 126
            N  RE  T PP  ++PA   VT
Sbjct: 997  NPSREDCTKPPEPVTPAPPQVT 1018


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,875
Number of Sequences: 336
Number of extensions: 3612
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)