Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0518
         (439 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0511 + 3688788-3688880,3689050-3689166,3689959-3690066,369...    81   3e-16
02_05_1126 - 34284733-34284810,34285151-34285291,34285424-342855...    81   3e-16
12_01_0798 + 7314885-7314953,7315324-7315387,7315489-7315677,731...    27   5.0  
12_01_0220 - 1657554-1657620,1657943-1658109,1658110-1658267,165...    27   5.0  
11_01_0219 - 1710206-1710246,1710479-1710620,1710699-1710752,171...    27   5.0  
02_04_0481 + 23284296-23284448,23284553-23284753,23284855-232879...    27   6.6  

>06_01_0511 +
           3688788-3688880,3689050-3689166,3689959-3690066,
           3690634-3690825,3691010-3691201,3691484-3691602,
           3691740-3691827,3692155-3692274,3692378-3692518,
           3693065-3693142
          Length = 415

 Score = 81.4 bits (192), Expect = 3e-16
 Identities = 38/62 (61%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
 Frame = +3

Query: 255 IXXNTEXIKVXKTLPYLVSXVXELXDVDPQEE-EEDGAVVDLDSQRKGKCAVIKTSTRQT 431
           I  N E IK+ K LPYLV  + E+ +++P++E EEDGA +DLDSQRKGKC V+KTSTRQT
Sbjct: 48  IKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQT 107

Query: 432 YF 437
            F
Sbjct: 108 IF 109


>02_05_1126 -
           34284733-34284810,34285151-34285291,34285424-34285543,
           34285787-34285874,34285962-34286080,34286437-34286628,
           34286802-34286993,34287309-34287416,34287983-34288099,
           34288214-34288315
          Length = 418

 Score = 81.4 bits (192), Expect = 3e-16
 Identities = 38/62 (61%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
 Frame = +3

Query: 255 IXXNTEXIKVXKTLPYLVSXVXELXDVDPQEE-EEDGAVVDLDSQRKGKCAVIKTSTRQT 431
           I  N E IK+ K LPYLV  + E+ +++P++E EEDGA +DLDSQRKGKC V+KTSTRQT
Sbjct: 51  IKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQT 110

Query: 432 YF 437
            F
Sbjct: 111 IF 112


>12_01_0798 + 7314885-7314953,7315324-7315387,7315489-7315677,
            7316430-7316625,7316727-7316953,7317177-7318134,
            7320104-7321307,7321517-7321876,7321965-7323195,
            7323334-7323599,7323738-7326335
          Length = 2453

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 18/45 (40%), Positives = 24/45 (53%)
 Frame = +1

Query: 103  WEDGEEALSEEVLRMPTDEIVSRTRLLXNXIKIMXSEVMRXSHEL 237
            W+DG EAL EE L  PT +   RT L  + +     E++R   EL
Sbjct: 2167 WDDGWEALPEE-LESPTKK-HGRTSLSVDPLHTCWMEIIRKLVEL 2209


>12_01_0220 -
           1657554-1657620,1657943-1658109,1658110-1658267,
           1658362-1658447,1658559-1658808,1659194-1660320,
           1662207-1662351,1663555-1663696,1663775-1663828,
           1663914-1663985,1664710-1664778,1664885-1664926,
           1665024-1665092,1665257-1665394,1665518-1665628,
           1665704-1665836,1666834-1666889,1667191-1667901
          Length = 1198

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = +3

Query: 321 ELXDVDPQEEEEDGAVVDL 377
           +L D D +EEEE+GAV D+
Sbjct: 237 DLEDFDDEEEEEEGAVGDI 255


>11_01_0219 -
           1710206-1710246,1710479-1710620,1710699-1710752,
           1710838-1710909,1711631-1711699,1711807-1711848,
           1711946-1712014,1712130-1712267,1712390-1712500,
           1712576-1712726,1713720-1713775,1714076-1714753
          Length = 540

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = +3

Query: 321 ELXDVDPQEEEEDGAVVDL 377
           +L D D +EEEE+GAV D+
Sbjct: 226 DLEDFDDEEEEEEGAVGDI 244


>02_04_0481 +
           23284296-23284448,23284553-23284753,23284855-23287971,
           23288510-23289353,23289468-23290120,23290573-23290676,
           23290898-23291000
          Length = 1724

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
 Frame = +1

Query: 19  QELLNLKDYYEKTNHNITMATT-LEDKSIWEDGEEALSEEVLRMPTDEIVSRTRLLXNXI 195
           Q L   K   EK  H +      LE+     DG  ++ E+ L+   DE+ S +  +   +
Sbjct: 751 QVLDEKKSDIEKLKHALDEKNAELENLKQTLDGNNSVLEK-LKQAWDELNSESENIKQAL 809

Query: 196 KIMXSEVMRXSHELQAXNDKL 258
            +  SEV +  H L   N ++
Sbjct: 810 DVKNSEVDKLKHALDENNSEI 830


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,470,097
Number of Sequences: 37544
Number of extensions: 90598
Number of successful extensions: 279
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 275
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 279
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 823860276
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)