Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0518
(439 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M34079-1|AAA36666.1| 404|Homo sapiens protein ( Human immunodef... 101 1e-21
CR456731-1|CAG33012.1| 404|Homo sapiens PSMC3 protein. 101 1e-21
BC107804-1|AAI07805.1| 491|Homo sapiens PSMC3 protein protein. 101 1e-21
BC106920-1|AAI06921.1| 439|Homo sapiens proteasome (prosome, ma... 101 1e-21
BC073165-1|AAH73165.3| 439|Homo sapiens proteasome (prosome, ma... 101 1e-21
BC008713-1|AAH08713.4| 439|Homo sapiens proteasome (prosome, ma... 101 1e-21
AK222485-1|BAD96205.1| 424|Homo sapiens proteasome 26S ATPase s... 101 1e-21
>M34079-1|AAA36666.1| 404|Homo sapiens protein ( Human
immunodeficiency virus tat transactivator binding
protein-1 (tbp-1) mRNA, complete cds. ).
Length = 404
Score = 101 bits (242), Expect = 1e-21
Identities = 48/61 (78%), Positives = 52/61 (85%)
Frame = +3
Query: 255 IXXNTEXIKVXKTLPYLVSXVXELXDVDPQEEEEDGAVVDLDSQRKGKCAVIKTSTRQTY 434
I N+E IKV KTLPYLVS V EL DVDP ++EEDGA +DLDSQRKGKCAVIKTSTRQTY
Sbjct: 38 IKENSEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLDSQRKGKCAVIKTSTRQTY 97
Query: 435 F 437
F
Sbjct: 98 F 98
Score = 52.4 bits (120), Expect = 7e-07
Identities = 24/38 (63%), Positives = 30/38 (78%)
Frame = +1
Query: 145 MPTDEIVSRTRLLXNXIKIMXSEVMRXSHELQAXNDKL 258
M T+EI+ RTRLL + IKIM SEV+R +HELQA DK+
Sbjct: 1 MSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMKDKI 38
>CR456731-1|CAG33012.1| 404|Homo sapiens PSMC3 protein.
Length = 404
Score = 101 bits (242), Expect = 1e-21
Identities = 48/61 (78%), Positives = 52/61 (85%)
Frame = +3
Query: 255 IXXNTEXIKVXKTLPYLVSXVXELXDVDPQEEEEDGAVVDLDSQRKGKCAVIKTSTRQTY 434
I N+E IKV KTLPYLVS V EL DVDP ++EEDGA +DLDSQRKGKCAVIKTSTRQTY
Sbjct: 38 IKENSEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLDSQRKGKCAVIKTSTRQTY 97
Query: 435 F 437
F
Sbjct: 98 F 98
Score = 52.4 bits (120), Expect = 7e-07
Identities = 24/38 (63%), Positives = 30/38 (78%)
Frame = +1
Query: 145 MPTDEIVSRTRLLXNXIKIMXSEVMRXSHELQAXNDKL 258
M T+EI+ RTRLL + IKIM SEV+R +HELQA DK+
Sbjct: 1 MSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMKDKI 38
>BC107804-1|AAI07805.1| 491|Homo sapiens PSMC3 protein protein.
Length = 491
Score = 101 bits (242), Expect = 1e-21
Identities = 48/61 (78%), Positives = 52/61 (85%)
Frame = +3
Query: 255 IXXNTEXIKVXKTLPYLVSXVXELXDVDPQEEEEDGAVVDLDSQRKGKCAVIKTSTRQTY 434
I N+E IKV KTLPYLVS V EL DVDP ++EEDGA +DLDSQRKGKCAVIKTSTRQTY
Sbjct: 125 IKENSEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLDSQRKGKCAVIKTSTRQTY 184
Query: 435 F 437
F
Sbjct: 185 F 185
Score = 69.7 bits (163), Expect = 4e-12
Identities = 34/68 (50%), Positives = 49/68 (72%), Gaps = 3/68 (4%)
Frame = +1
Query: 64 NITMATTLEDK--SIWEDGEE-ALSEEVLRMPTDEIVSRTRLLXNXIKIMXSEVMRXSHE 234
NI T ++K ++W++ E+ + EEVL+M T+EI+ RTRLL + IKIM SEV+R +HE
Sbjct: 58 NIESPVTRQEKMATVWDEAEQDGIGEEVLKMSTEEIIQRTRLLDSEIKIMKSEVLRVTHE 117
Query: 235 LQAXNDKL 258
LQA DK+
Sbjct: 118 LQAMKDKI 125
>BC106920-1|AAI06921.1| 439|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 3 protein.
Length = 439
Score = 101 bits (242), Expect = 1e-21
Identities = 48/61 (78%), Positives = 52/61 (85%)
Frame = +3
Query: 255 IXXNTEXIKVXKTLPYLVSXVXELXDVDPQEEEEDGAVVDLDSQRKGKCAVIKTSTRQTY 434
I N+E IKV KTLPYLVS V EL DVDP ++EEDGA +DLDSQRKGKCAVIKTSTRQTY
Sbjct: 73 IKENSEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLDSQRKGKCAVIKTSTRQTY 132
Query: 435 F 437
F
Sbjct: 133 F 133
Score = 69.7 bits (163), Expect = 4e-12
Identities = 34/68 (50%), Positives = 49/68 (72%), Gaps = 3/68 (4%)
Frame = +1
Query: 64 NITMATTLEDK--SIWEDGEE-ALSEEVLRMPTDEIVSRTRLLXNXIKIMXSEVMRXSHE 234
NI T ++K ++W++ E+ + EEVL+M T+EI+ RTRLL + IKIM SEV+R +HE
Sbjct: 6 NIESPVTRQEKMATVWDEAEQDGIGEEVLKMSTEEIIQRTRLLDSEIKIMKSEVLRVTHE 65
Query: 235 LQAXNDKL 258
LQA DK+
Sbjct: 66 LQAMKDKI 73
>BC073165-1|AAH73165.3| 439|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 3 protein.
Length = 439
Score = 101 bits (242), Expect = 1e-21
Identities = 48/61 (78%), Positives = 52/61 (85%)
Frame = +3
Query: 255 IXXNTEXIKVXKTLPYLVSXVXELXDVDPQEEEEDGAVVDLDSQRKGKCAVIKTSTRQTY 434
I N+E IKV KTLPYLVS V EL DVDP ++EEDGA +DLDSQRKGKCAVIKTSTRQTY
Sbjct: 73 IKENSEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLDSQRKGKCAVIKTSTRQTY 132
Query: 435 F 437
F
Sbjct: 133 F 133
Score = 69.7 bits (163), Expect = 4e-12
Identities = 34/68 (50%), Positives = 49/68 (72%), Gaps = 3/68 (4%)
Frame = +1
Query: 64 NITMATTLEDK--SIWEDGEE-ALSEEVLRMPTDEIVSRTRLLXNXIKIMXSEVMRXSHE 234
NI T ++K ++W++ E+ + EEVL+M T+EI+ RTRLL + IKIM SEV+R +HE
Sbjct: 6 NIESPVTRQEKMATVWDEAEQDGIGEEVLKMSTEEIIQRTRLLDSEIKIMKSEVLRVTHE 65
Query: 235 LQAXNDKL 258
LQA DK+
Sbjct: 66 LQAMKDKI 73
>BC008713-1|AAH08713.4| 439|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 3 protein.
Length = 439
Score = 101 bits (242), Expect = 1e-21
Identities = 48/61 (78%), Positives = 52/61 (85%)
Frame = +3
Query: 255 IXXNTEXIKVXKTLPYLVSXVXELXDVDPQEEEEDGAVVDLDSQRKGKCAVIKTSTRQTY 434
I N+E IKV KTLPYLVS V EL DVDP ++EEDGA +DLDSQRKGKCAVIKTSTRQTY
Sbjct: 73 IKENSEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLDSQRKGKCAVIKTSTRQTY 132
Query: 435 F 437
F
Sbjct: 133 F 133
Score = 69.7 bits (163), Expect = 4e-12
Identities = 34/68 (50%), Positives = 49/68 (72%), Gaps = 3/68 (4%)
Frame = +1
Query: 64 NITMATTLEDK--SIWEDGEE-ALSEEVLRMPTDEIVSRTRLLXNXIKIMXSEVMRXSHE 234
NI T ++K ++W++ E+ + EEVL+M T+EI+ RTRLL + IKIM SEV+R +HE
Sbjct: 6 NIESPVTRQEKMATVWDEAEQDGIGEEVLKMSTEEIIQRTRLLDSEIKIMKSEVLRVTHE 65
Query: 235 LQAXNDKL 258
LQA DK+
Sbjct: 66 LQAMKDKI 73
>AK222485-1|BAD96205.1| 424|Homo sapiens proteasome 26S ATPase
subunit 3 variant protein.
Length = 424
Score = 101 bits (242), Expect = 1e-21
Identities = 48/61 (78%), Positives = 52/61 (85%)
Frame = +3
Query: 255 IXXNTEXIKVXKTLPYLVSXVXELXDVDPQEEEEDGAVVDLDSQRKGKCAVIKTSTRQTY 434
I N+E IKV KTLPYLVS V EL DVDP ++EEDGA +DLDSQRKGKCAVIKTSTRQTY
Sbjct: 58 IKENSEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLDSQRKGKCAVIKTSTRQTY 117
Query: 435 F 437
F
Sbjct: 118 F 118
Score = 67.3 bits (157), Expect = 2e-11
Identities = 30/55 (54%), Positives = 43/55 (78%), Gaps = 1/55 (1%)
Frame = +1
Query: 97 SIWEDGEE-ALSEEVLRMPTDEIVSRTRLLXNXIKIMXSEVMRXSHELQAXNDKL 258
++W++ E+ + EEVL+M T+EI+ RTRLL + IKIM SEV+R +HELQA DK+
Sbjct: 4 TVWDEAEQDGIGEEVLKMSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMKDKI 58
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,856,076
Number of Sequences: 237096
Number of extensions: 525718
Number of successful extensions: 1266
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1250
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1266
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3545165828
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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