Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0518
         (439 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF067618-3|AAC19196.1|  430|Caenorhabditis elegans Proteasome re...    77   4e-15
U39851-2|AAF99874.1|  540|Caenorhabditis elegans Hypothetical pr...    27   6.0  
U21322-6|AAN65314.2|  669|Caenorhabditis elegans Hypothetical pr...    27   6.0  
U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical pr...    27   6.0  
AL117204-9|CAB55124.1|  358|Caenorhabditis elegans Hypothetical ...    27   6.0  

>AF067618-3|AAC19196.1|  430|Caenorhabditis elegans Proteasome
           regulatory particle,atpase-like protein 5 protein.
          Length = 430

 Score = 77.4 bits (182), Expect = 4e-15
 Identities = 43/61 (70%), Positives = 46/61 (75%)
 Frame = +3

Query: 255 IXXNTEXIKVXKTLPYLVSXVXELXDVDPQEEEEDGAVVDLDSQRKGKCAVIKTSTRQTY 434
           I  NTE IKV KTLPYLVS V EL D++   EEE GA VDLD+Q K KCAVIKTSTR TY
Sbjct: 66  IKENTERIKVNKTLPYLVSNVVELLDLEDNTEEE-GANVDLDAQ-KTKCAVIKTSTRATY 123

Query: 435 F 437
           F
Sbjct: 124 F 124



 Score = 50.0 bits (114), Expect = 7e-07
 Identities = 21/48 (43%), Positives = 33/48 (68%)
 Frame = +1

Query: 115 EEALSEEVLRMPTDEIVSRTRLLXNXIKIMXSEVMRXSHELQAXNDKL 258
           E+A+ EE+L+M T+++ SRT LL N I+IM SEV R +H      +++
Sbjct: 19  EDAIDEEILKMSTEDLKSRTHLLDNEIRIMRSEVQRINHSATTLKERI 66


>U39851-2|AAF99874.1|  540|Caenorhabditis elegans Hypothetical
           protein C23G10.6 protein.
          Length = 540

 Score = 27.1 bits (57), Expect = 6.0
 Identities = 13/53 (24%), Positives = 28/53 (52%)
 Frame = +1

Query: 25  LLNLKDYYEKTNHNITMATTLEDKSIWEDGEEALSEEVLRMPTDEIVSRTRLL 183
           + +L D   +  HN+T    + D++        ++++V+ +  DEI+SR  L+
Sbjct: 75  MAHLADTLTEAGHNVTFLIPVADETRKNQLGVKITKDVVLVEQDEIMSRDTLI 127


>U21322-6|AAN65314.2|  669|Caenorhabditis elegans Hypothetical
           protein K10D2.1b protein.
          Length = 669

 Score = 27.1 bits (57), Expect = 6.0
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +3

Query: 330 DVDPQEEEEDGAVVDLDSQRKGKCAVIKTSTR 425
           D D +EEEED  + D++S R  K  V  T+++
Sbjct: 528 DDDDEEEEEDMEISDIESVRNKKRKVPATTSQ 559


>U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical
           protein K10D2.1a protein.
          Length = 1223

 Score = 27.1 bits (57), Expect = 6.0
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +3

Query: 330 DVDPQEEEEDGAVVDLDSQRKGKCAVIKTSTR 425
           D D +EEEED  + D++S R  K  V  T+++
Sbjct: 816 DDDDEEEEEDMEISDIESVRNKKRKVPATTSQ 847


>AL117204-9|CAB55124.1|  358|Caenorhabditis elegans Hypothetical
           protein Y116A8C.18 protein.
          Length = 358

 Score = 27.1 bits (57), Expect = 6.0
 Identities = 15/73 (20%), Positives = 37/73 (50%)
 Frame = +1

Query: 22  ELLNLKDYYEKTNHNITMATTLEDKSIWEDGEEALSEEVLRMPTDEIVSRTRLLXNXIKI 201
           ++LN+KD+Y+++     +   + +K +    EE  + ++ +   +EIV+  +L    I  
Sbjct: 24  QMLNVKDWYKQSKLVFMLIVAILEKDV---KEERNATKMAKNLNEEIVNELKLSEELIDC 80

Query: 202 MXSEVMRXSHELQ 240
           +  ++     EL+
Sbjct: 81  LEKQLQESKIELK 93


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,607,547
Number of Sequences: 27780
Number of extensions: 81702
Number of successful extensions: 256
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 254
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 745968860
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)