Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0518
(439 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g05530.1 68416.m00606 26S proteasome AAA-ATPase subunit (RPT5... 80 6e-16
At1g09100.1 68414.m01016 26S protease regulatory subunit 6A, put... 80 7e-16
At5g25590.1 68418.m03045 expressed protein contains Pfam profile... 31 0.45
At2g05180.1 68415.m00545 cytochrome P450 family protein similar ... 31 0.45
At3g53540.1 68416.m05912 expressed protein 28 3.2
At3g20950.1 68416.m02648 cytochrome P450 family protein similar ... 28 3.2
At5g47990.1 68418.m05929 cytochrome P450 family protein similar ... 27 5.5
At3g20940.1 68416.m02647 cytochrome P450 family protein similar ... 27 5.5
At3g04830.2 68416.m00524 expressed protein 27 5.5
At3g04830.1 68416.m00523 expressed protein 27 5.5
At5g54410.1 68418.m06777 hypothetical protein 27 7.3
At4g35610.1 68417.m05058 zinc finger (C2H2 type) family protein ... 27 7.3
At3g62240.1 68416.m06992 zinc finger (C2H2 type) family protein ... 27 7.3
At3g54630.1 68416.m06044 expressed protein weak similarity to re... 27 7.3
At3g20110.1 68416.m02550 cytochrome P450 family protein similar ... 27 7.3
At3g45090.2 68416.m04862 2-phosphoglycerate kinase-related conta... 26 9.7
At3g45090.1 68416.m04863 2-phosphoglycerate kinase-related conta... 26 9.7
At3g20090.1 68416.m02548 cytochrome P450 family protein similar ... 26 9.7
At1g50030.1 68414.m05614 target of rapamycin protein (TOR) ident... 26 9.7
>At3g05530.1 68416.m00606 26S proteasome AAA-ATPase subunit (RPT5a)
identical to GB:AAF22525 GI:6652886 from [Arabidopsis
thaliana]
Length = 424
Score = 80.2 bits (189), Expect = 6e-16
Identities = 37/62 (59%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
Frame = +3
Query: 255 IXXNTEXIKVXKTLPYLVSXVXELXDVDPQEE-EEDGAVVDLDSQRKGKCAVIKTSTRQT 431
I N E IK+ K LPYLV + E+ +++P+++ EEDGA +DLDSQRKGKC V+KTSTRQT
Sbjct: 57 IKENQEKIKLNKQLPYLVGNIVEILEMNPEDDAEEDGANIDLDSQRKGKCVVLKTSTRQT 116
Query: 432 YF 437
F
Sbjct: 117 IF 118
>At1g09100.1 68414.m01016 26S protease regulatory subunit 6A,
putative identical to SP:O04019 from [Arabidopsis
thaliana]
Length = 423
Score = 79.8 bits (188), Expect = 7e-16
Identities = 37/62 (59%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Frame = +3
Query: 255 IXXNTEXIKVXKTLPYLVSXVXELXDVDPQEE-EEDGAVVDLDSQRKGKCAVIKTSTRQT 431
I N E IK+ K LPYLV + E+ ++ P+++ EEDGA +DLDSQRKGKC V+KTSTRQT
Sbjct: 56 IKENQEKIKLNKQLPYLVGNIVEILEMSPEDDAEEDGANIDLDSQRKGKCVVLKTSTRQT 115
Query: 432 YF 437
F
Sbjct: 116 IF 117
Score = 32.3 bits (70), Expect = 0.15
Identities = 14/43 (32%), Positives = 27/43 (62%)
Frame = +1
Query: 130 EEVLRMPTDEIVSRTRLLXNXIKIMXSEVMRXSHELQAXNDKL 258
+++ M TD+I +RLL N I+I+ E R + +L++ +K+
Sbjct: 14 DQLASMTTDDIGRASRLLANEIRILKEESQRTNLDLESVKEKI 56
>At5g25590.1 68418.m03045 expressed protein contains Pfam profile
PF04783: Protein of unknown function (DUF630)
Length = 775
Score = 30.7 bits (66), Expect = 0.45
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +3
Query: 321 ELXDVDPQEEEEDGAVVDLDSQRKGKCAVIKTSTRQTYF 437
E D + +EEEE+ VV++ ++KGK + +ST F
Sbjct: 276 EEEDEEEEEEEEEEVVVEVKKKKKGKAKIEHSSTAPPEF 314
>At2g05180.1 68415.m00545 cytochrome P450 family protein similar to
Cytochrome P450 93A1 (SP:Q42798) {Glycine max}
Length = 442
Score = 30.7 bits (66), Expect = 0.45
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = +1
Query: 19 QELLNLKDYY--EKTNHNITMATTLEDKSIWEDGEEALSEEVLRMP 150
QE +K +Y EKT I + D WED +E E LR P
Sbjct: 384 QERCKIKGFYIPEKTTLVINAYAVMRDPDSWEDPDEFKPERFLRAP 429
>At3g53540.1 68416.m05912 expressed protein
Length = 924
Score = 27.9 bits (59), Expect = 3.2
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 46 YEKTNHNITMATTLEDKSIWEDGEEALS 129
+ ++HNI MATT + S++ED E+ S
Sbjct: 789 FSDSDHNIVMATTPVEPSLFEDLEKKYS 816
>At3g20950.1 68416.m02648 cytochrome P450 family protein similar to
Cytochrome P450 93A3 (P450 CP5) (SP:O81973) [Glycine
max];
Length = 526
Score = 27.9 bits (59), Expect = 3.2
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +1
Query: 19 QELLNLKDYY--EKTNHNITMATTLEDKSIWEDGEEALSEEVL 141
QE LK +Y EKT + + + D +WED EE E +
Sbjct: 388 QERCELKGFYIPEKTLLVVNVYAIMRDPKLWEDPEEFKPERFI 430
>At5g47990.1 68418.m05929 cytochrome P450 family protein similar to
Cytochrome P450 93A3 (P450 CP5) (SP:O81973) [Glycine
max];
Length = 511
Score = 27.1 bits (57), Expect = 5.5
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = +1
Query: 19 QELLNLKDYY--EKTNHNITMATTLEDKSIWEDGEEALSEEVL 141
+E +K +Y EKT + + + D WED EE E L
Sbjct: 384 KETCEIKGFYIPEKTRLFVNVYAIMRDPDFWEDPEEFKPERFL 426
>At3g20940.1 68416.m02647 cytochrome P450 family protein similar to
Cytochrome P450 93A3 (P450 CP5) (SP:O81973) [Glycine
max]; similar to cytochrome P450 (SP:H71417)
[Arabidopsis thaliana]
Length = 523
Score = 27.1 bits (57), Expect = 5.5
Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
Frame = +1
Query: 19 QELLNLKDYY--EKTNHNITMATTLEDKSIWEDGEEALSEEVLRMPTDE 159
QE LK +Y EKT + + D + WED EE E + E
Sbjct: 385 QERCELKGFYIPEKTLLVVNTYAIMRDPNFWEDPEEFKPERFIASSRSE 433
>At3g04830.2 68416.m00524 expressed protein
Length = 299
Score = 27.1 bits (57), Expect = 5.5
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +1
Query: 76 ATTLEDKSIWEDGEEALSEEVLRMPTDEIVSRTRL 180
A LE K +WE+ E+A + + P D+++ + ++
Sbjct: 101 ALLLEAKGMWEEAEKAYTSLLEDNPLDQVIHKRKV 135
>At3g04830.1 68416.m00523 expressed protein
Length = 303
Score = 27.1 bits (57), Expect = 5.5
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +1
Query: 76 ATTLEDKSIWEDGEEALSEEVLRMPTDEIVSRTRL 180
A LE K +WE+ E+A + + P D+++ + ++
Sbjct: 105 ALLLEAKGMWEEAEKAYTSLLEDNPLDQVIHKRKV 139
>At5g54410.1 68418.m06777 hypothetical protein
Length = 219
Score = 26.6 bits (56), Expect = 7.3
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +1
Query: 16 VQELLNLKDYYEKTNHNITMATTLEDKSIWEDGEEALSEEVLRMPTDE 159
+++ +LKD KT + T +K E+ E+ L+EE + PT+E
Sbjct: 79 LKDAKDLKDLTYKTKVENKLKKTQPEKDRAEEEEKDLTEEKKKDPTEE 126
>At4g35610.1 68417.m05058 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 271
Score = 26.6 bits (56), Expect = 7.3
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +1
Query: 49 EKTNHNITMATTLEDKSIWEDGEEALSEEVLRMPTDEIVSR 171
EKT ++T E W D E + E VL +P I SR
Sbjct: 7 EKTKVDVTEEEKEESDEQWSDEETNMREIVLGLPALNISSR 47
>At3g62240.1 68416.m06992 zinc finger (C2H2 type) family protein
contains Pfam PF00096: Zinc finger, C2H2 type
Length = 812
Score = 26.6 bits (56), Expect = 7.3
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = +3
Query: 336 DPQEEEEDGAVVDLDSQR--KGKCAVIKTSTRQT 431
+PQEEEE+ D ++ R KGK V+ T + T
Sbjct: 710 NPQEEEEEAISKDKNTYRSDKGKSQVVGTDSSST 743
>At3g54630.1 68416.m06044 expressed protein weak similarity to
retinoblastoma-associated protein HEC [Homo sapiens]
GI:2501873
Length = 568
Score = 26.6 bits (56), Expect = 7.3
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = +3
Query: 354 EDGAVVDLDSQRKGKCAVIKTSTRQT 431
ED V DLDSQ GK KTS +T
Sbjct: 191 EDDKVNDLDSQFLGKLEAEKTSVAET 216
>At3g20110.1 68416.m02550 cytochrome P450 family protein similar to
Cytochrome P450 93A1 (SP:Q42798) {Glycine max};
contains Pfam profile: PF00067 cytochrome P450
Length = 510
Score = 26.6 bits (56), Expect = 7.3
Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = +1
Query: 19 QELLNLKDYY--EKTNHNITMATTLEDKSIWEDGEEALSEEVLR 144
Q +K +Y EKT + + D + WED +E E LR
Sbjct: 381 QRSCEMKGFYIAEKTTLVVNAYAVMRDPTTWEDPDEFKPERFLR 424
>At3g45090.2 68416.m04862 2-phosphoglycerate kinase-related contains
weak similarity to 2-phosphoglycerate kinase (GI:467751)
[Methanothermus fervidus]
Length = 698
Score = 26.2 bits (55), Expect = 9.7
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 85 LEDKSIWEDGEEALSEEVLRM 147
+EDKS W D EE S + + M
Sbjct: 591 MEDKSYWTDNEEEESRDTISM 611
>At3g45090.1 68416.m04863 2-phosphoglycerate kinase-related contains
weak similarity to 2-phosphoglycerate kinase (GI:467751)
[Methanothermus fervidus]
Length = 717
Score = 26.2 bits (55), Expect = 9.7
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 85 LEDKSIWEDGEEALSEEVLRM 147
+EDKS W D EE S + + M
Sbjct: 610 MEDKSYWTDNEEEESRDTISM 630
>At3g20090.1 68416.m02548 cytochrome P450 family protein similar to
Cytochrome P450 93A3 (P450 CP5) (SP:O81973) {Glycine
max}; contains Pfam profile: PF00067 cytochrome P450
Length = 386
Score = 26.2 bits (55), Expect = 9.7
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = +1
Query: 19 QELLNLKDYY--EKTNHNITMATTLEDKSIWEDGEEALSEEVL 141
QE +K +Y EKT I + D WED +E E L
Sbjct: 248 QERCEMKGFYIPEKTTLVINAYAVMRDPDSWEDPDEFKPERFL 290
>At1g50030.1 68414.m05614 target of rapamycin protein (TOR) identical
to pTOR [Arabidopsis thaliana] GI:12002902; contains Pfam
profiles PF00454 Phosphatidylinositol 3- and 4-kinase,
PF02259 FAT domain, PF02260 FATC domain
Length = 2481
Score = 26.2 bits (55), Expect = 9.7
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +3
Query: 330 DVDPQEEEEDGAVVDLDSQRK 392
DV+P EE+ED A +DL ++
Sbjct: 2362 DVEPDEEDEDPADIDLPQPQR 2382
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,211,222
Number of Sequences: 28952
Number of extensions: 76970
Number of successful extensions: 266
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 266
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 692941200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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