Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0517
(745 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U82936-1|AAB40869.1| 682|Caenorhabditis elegans protein kinase ... 33 0.21
U82935-1|AAB40868.1| 680|Caenorhabditis elegans protein kinase ... 33 0.21
U29376-5|AAA68709.2| 936|Caenorhabditis elegans Protein kinase ... 33 0.21
U29376-4|AAM51504.1| 682|Caenorhabditis elegans Protein kinase ... 33 0.21
U29376-3|AAM51503.1| 680|Caenorhabditis elegans Protein kinase ... 33 0.21
Z68114-9|CAA92156.1| 320|Caenorhabditis elegans Hypothetical pr... 31 0.86
Z81492-2|CAB04027.1| 458|Caenorhabditis elegans Hypothetical pr... 30 2.0
AF003130-12|AAB54128.2| 175|Caenorhabditis elegans Hypothetical... 29 3.5
AF003130-11|AAM15579.1| 250|Caenorhabditis elegans Hypothetical... 29 3.5
AF003130-9|AAP68939.1| 307|Caenorhabditis elegans Hypothetical ... 29 3.5
Z81015-4|CAB02658.2| 1170|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z67755-6|CAA91759.1| 311|Caenorhabditis elegans Hypothetical pr... 28 8.0
AF016666-7|AAB66087.1| 196|Caenorhabditis elegans Hypothetical ... 28 8.0
AC006680-9|AAK72299.1| 353|Caenorhabditis elegans Hypothetical ... 28 8.0
>U82936-1|AAB40869.1| 682|Caenorhabditis elegans protein kinase C2
B isoform protein.
Length = 682
Score = 33.1 bits (72), Expect = 0.21
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -2
Query: 402 LFFYHFKSLVFRYSSFDLKIFENRTELSISQCFSCKD-IFDRINTYTFC 259
LFF H K +++R D + E + I+ CK+ IF T TFC
Sbjct: 460 LFFLHSKGIIYRDLKLDNVMLERDGHIKITDFGMCKENIFGDATTKTFC 508
>U82935-1|AAB40868.1| 680|Caenorhabditis elegans protein kinase C2
A isoform protein.
Length = 680
Score = 33.1 bits (72), Expect = 0.21
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -2
Query: 402 LFFYHFKSLVFRYSSFDLKIFENRTELSISQCFSCKD-IFDRINTYTFC 259
LFF H K +++R D + E + I+ CK+ IF T TFC
Sbjct: 460 LFFLHSKGIIYRDLKLDNVMLERDGHIKITDFGMCKENIFGDATTKTFC 508
>U29376-5|AAA68709.2| 936|Caenorhabditis elegans Protein kinase c
protein 2, isoformc protein.
Length = 936
Score = 33.1 bits (72), Expect = 0.21
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -2
Query: 402 LFFYHFKSLVFRYSSFDLKIFENRTELSISQCFSCKD-IFDRINTYTFC 259
LFF H K +++R D + E + I+ CK+ IF T TFC
Sbjct: 600 LFFLHSKGIIYRDLKLDNVMLERDGHIKITDFGMCKENIFGDATTKTFC 648
>U29376-4|AAM51504.1| 682|Caenorhabditis elegans Protein kinase c
protein 2, isoformb protein.
Length = 682
Score = 33.1 bits (72), Expect = 0.21
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -2
Query: 402 LFFYHFKSLVFRYSSFDLKIFENRTELSISQCFSCKD-IFDRINTYTFC 259
LFF H K +++R D + E + I+ CK+ IF T TFC
Sbjct: 460 LFFLHSKGIIYRDLKLDNVMLERDGHIKITDFGMCKENIFGDATTKTFC 508
>U29376-3|AAM51503.1| 680|Caenorhabditis elegans Protein kinase c
protein 2, isoforma protein.
Length = 680
Score = 33.1 bits (72), Expect = 0.21
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -2
Query: 402 LFFYHFKSLVFRYSSFDLKIFENRTELSISQCFSCKD-IFDRINTYTFC 259
LFF H K +++R D + E + I+ CK+ IF T TFC
Sbjct: 460 LFFLHSKGIIYRDLKLDNVMLERDGHIKITDFGMCKENIFGDATTKTFC 508
>Z68114-9|CAA92156.1| 320|Caenorhabditis elegans Hypothetical
protein F17A2.12 protein.
Length = 320
Score = 31.1 bits (67), Expect = 0.86
Identities = 33/113 (29%), Positives = 57/113 (50%)
Frame = -2
Query: 729 IIFILGTIFRILLHISLFYHRPKVLLTI*KRFPRNHSKLHRK*KVVSST*IPHRNISDAA 550
I FI TI +++L +FYH P L + K F N S L + VV S R I+ A
Sbjct: 16 IFFIFSTITQLMLIYLIFYHSPTHLKML-KVFLLNTS-LFQIILVVVSCSSQFRMIT-TA 72
Query: 549 FPKPMRDHGISPILDSQFRKFRRHYVHSVVRFIAFLTNIL*NDNVFCTFLFFY 391
P +R +G+ L++ + + ++ V++ AF++ + ++ TF+F Y
Sbjct: 73 IPIELRSYGLLRYLEA----WLGYTMYQVLQTSAFMSGM----SILITFVFKY 117
>Z81492-2|CAB04027.1| 458|Caenorhabditis elegans Hypothetical
protein E03H4.5 protein.
Length = 458
Score = 29.9 bits (64), Expect = 2.0
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = -2
Query: 480 HYVHSVVRFIAFLTNIL*NDN-VFCTFLF-FYHFKSLVFRYSSFDLKIFENRTELSISQC 307
+ V+SVV I L N L ++ + +F FYHF + +RY S L+IF +S +
Sbjct: 21 YLVNSVVEQIQQLANFLESEKKIDASFAIKFYHFAYVDYRYDSPRLRIFALNPCIS-KKN 79
Query: 306 FSCKDIF 286
F DIF
Sbjct: 80 FLSVDIF 86
>AF003130-12|AAB54128.2| 175|Caenorhabditis elegans Hypothetical
protein F55A12.2a protein.
Length = 175
Score = 29.1 bits (62), Expect = 3.5
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 537 LVLEKQRPKYFDEVFKCLKQPFIFG 611
+ L + K+F+ + KC K PF+FG
Sbjct: 52 MFLYDAKAKFFESIRKCPKSPFVFG 76
>AF003130-11|AAM15579.1| 250|Caenorhabditis elegans Hypothetical
protein F55A12.2b protein.
Length = 250
Score = 29.1 bits (62), Expect = 3.5
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 537 LVLEKQRPKYFDEVFKCLKQPFIFG 611
+ L + K+F+ + KC K PF+FG
Sbjct: 52 MFLYDAKAKFFESIRKCPKSPFVFG 76
>AF003130-9|AAP68939.1| 307|Caenorhabditis elegans Hypothetical
protein F55A12.2c protein.
Length = 307
Score = 29.1 bits (62), Expect = 3.5
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 537 LVLEKQRPKYFDEVFKCLKQPFIFG 611
+ L + K+F+ + KC K PF+FG
Sbjct: 109 MFLYDAKAKFFESIRKCPKSPFVFG 133
>Z81015-4|CAB02658.2| 1170|Caenorhabditis elegans Hypothetical protein
C11E4.6 protein.
Length = 1170
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/50 (28%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = -2
Query: 402 LFFYHFKSLVFRYSSFDLKIF-ENRTELSISQCFSCKDIFDRINTYTFCI 256
+F FK+L+ Y + +++ ++R +L+ CF +D +R +TFC+
Sbjct: 1073 IFDETFKTLLDGYGVYTIRVVCQDRKDLNFF-CFVARDTENRFFCHTFCV 1121
>Z67755-6|CAA91759.1| 311|Caenorhabditis elegans Hypothetical
protein F54F7.6 protein.
Length = 311
Score = 27.9 bits (59), Expect = 8.0
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Frame = +1
Query: 367 PENERFKMVKKQECTKDV---IILKNVCKK-GYKTYYRMDVV-SPKFAELAIKNWRDSMV 531
P E F +K+ K V ++ KN+ KK K+ MD SPK ELA+ N M
Sbjct: 178 PFTEIFSKIKRLPKEKGVDVQMVQKNLVKKDNRKSLKDMDESKSPKPFELAVFNQDGGMF 237
Query: 532 SHWFWKSSVR 561
S W K ++
Sbjct: 238 SVWMTKEQMQ 247
>AF016666-7|AAB66087.1| 196|Caenorhabditis elegans Hypothetical
protein B0281.1 protein.
Length = 196
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -2
Query: 258 IGIICLTNKLISLRPSFVVPLTSSYTSVC 172
IG +CL K I+ P F+VP+ + + S+C
Sbjct: 36 IGSLCLIKKFINASPCFLVPI-AFHMSLC 63
>AC006680-9|AAK72299.1| 353|Caenorhabditis elegans Hypothetical
protein R13D7.2 protein.
Length = 353
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +1
Query: 277 YSVEDIFAREALAYRELCPVFEDLQIEAGIPENERFKMVKKQECTKD 417
Y++ED+ A A +C + E E ++FK + +Q+C KD
Sbjct: 59 YNLEDVTADIAKNMSYVCDRITNCFDEIPCDEAQKFKRIYEQKCEKD 105
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,413,995
Number of Sequences: 27780
Number of extensions: 391785
Number of successful extensions: 1227
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1227
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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