Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0517
         (745 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    27   0.19 
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    27   0.19 
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    23   4.0  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    22   5.3  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           22   7.0  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   7.0  
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    21   9.2  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 27.1 bits (57), Expect = 0.19
 Identities = 12/48 (25%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
 Frame = +1

Query: 382 FKMVKKQECTKDVII--LKNVCKKGYKTYYRMDVVSPKFAELAIKNWR 519
           F ++   E  KD++I        +G   + R + +SP    L ++ WR
Sbjct: 82  FLLLNDPELIKDILIRDFSKFANRGLGVFERTEPLSPHLLNLEVERWR 129


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 27.1 bits (57), Expect = 0.19
 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = -2

Query: 402 LFFYHFKSLVFRYSSFDLKIFENRTELSISQCFSCKD-IFDRINTYTFC 259
           LFF H + +V+R    D  + +    + I+    CK+ I     T TFC
Sbjct: 98  LFFLHGRGIVYRDLKLDNVLLDQDGHIKIADFGMCKEGISGDKTTKTFC 146


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -2

Query: 231 LISLRPSFVVPLTSSYTSVCLYQ 163
           +I   P FVV L S + S C++Q
Sbjct: 345 IICWLPFFVVNLWSGFCSQCIWQ 367


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = -1

Query: 700 DLTPYFSLLSSSKSF 656
           DLTP ++++SSS SF
Sbjct: 187 DLTPTYAVVSSSISF 201


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 736 PKYNLHIRNNIQDLTPYFS 680
           P+YN H+  +  D   YFS
Sbjct: 84  PEYNNHLYGSTPDSRDYFS 102


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +2

Query: 281 RSKISLQEKHWLIESSVRFSKIFKSKLEY 367
           R  IS   KH+ I+SSV  SK+  S   Y
Sbjct: 256 RIVISESLKHFTIQSSVTTSKMMVSPRLY 284


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 10/22 (45%), Positives = 11/22 (50%), Gaps = 5/22 (22%)
 Frame = -2

Query: 309 CFSCKDIFD-----RINTYTFC 259
           CF CKDI       R+  Y FC
Sbjct: 25  CFVCKDITSTSALYRLKLYLFC 46


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,442
Number of Sequences: 438
Number of extensions: 5307
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23266665
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)