Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0516
         (553 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    29   0.036
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.3  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    22   4.1  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   9.5  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   9.5  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 28.7 bits (61), Expect = 0.036
 Identities = 21/68 (30%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
 Frame = -2

Query: 510 DSLSQSESDCANGC-GYDCXSNYDGGNETWTCACDRNDSCMAMRGDHIAPSEREVPCRPT 334
           D ++     C +G  GY C  N D   +    AC  N +C+   G        E  C P 
Sbjct: 239 DLVNSFSCSCPSGTLGYICEINVD---DCRPGACHNNGTCLDKVGGF------ECKCPPG 289

Query: 333 FVRPSCPG 310
           FV P C G
Sbjct: 290 FVGPRCEG 297


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -2

Query: 273 RRILYFPCVPISGNVDI 223
           RRI YF CV I+ NV +
Sbjct: 54  RRIYYFYCVSITFNVHL 70


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 361 RWRDMVAPHRHTGVV 405
           RWRD +    H+GVV
Sbjct: 310 RWRDRIYDAIHSGVV 324


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +2

Query: 38  NLTTLYYSICLI 73
           NLT + YS+C+I
Sbjct: 173 NLTLITYSLCVI 184


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +2

Query: 38  NLTTLYYSICLI 73
           NLT + YS+C+I
Sbjct: 173 NLTLITYSLCVI 184


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,444
Number of Sequences: 336
Number of extensions: 2119
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13621010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)