Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0515
         (714 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_38704| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.1  
SB_51372| Best HMM Match : Pyr_redox (HMM E-Value=3e-12)               29   4.9  
SB_15719| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.5  
SB_11020| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.6  
SB_54898| Best HMM Match : Peptidase_M19 (HMM E-Value=8.4e-12)         28   8.6  

>SB_38704| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 287

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = -2

Query: 530 ILIGLKYRLNYYKGFRFQNIKRNFSTAYIKILISPSEL 417
           I I LK RL+Y   ++FQN++ N      K L+  SEL
Sbjct: 42  IPIKLKRRLSYKHHYQFQNVRPNKVLEAAKYLVRTSEL 79


>SB_51372| Best HMM Match : Pyr_redox (HMM E-Value=3e-12)
          Length = 872

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -2

Query: 251 QVLRSPV*LQRLPHPSNRNALLLHGRNSIMLSFYN 147
           Q LR    +QR P P+ RN++ LHG  +   + +N
Sbjct: 22  QALRQQNQVQRRPEPTPRNSIFLHGLRAQTATNFN 56


>SB_15719| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 364

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -3

Query: 601 YFYNNCEKSTVLSIR 557
           Y+YNNC   TVL++R
Sbjct: 19  YYYNNCSNETVLNVR 33


>SB_11020| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 322

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 21/55 (38%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
 Frame = -1

Query: 330 AHSPPGVKWLLEPI--DIHNVNAPPTLNTSSKVSSIVTTAAPPFKPKRITASRQK 172
           A +P GVKWLL  +  D   V A       S  S IV T   P  PK  +  R K
Sbjct: 74  ATAPAGVKWLLIYMMKDRELVKAWVRRAEESGFSGIVVTVDSPEGPKNYSIERNK 128


>SB_54898| Best HMM Match : Peptidase_M19 (HMM E-Value=8.4e-12)
          Length = 226

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 9/25 (36%), Positives = 20/25 (80%)
 Frame = +2

Query: 200 GLKGGAAVVTILETLELVFKVGGAF 274
           G++GG A+ + L+TL +++++GG +
Sbjct: 96  GIEGGHAIDSSLDTLRMMYEMGGRY 120


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,125,274
Number of Sequences: 59808
Number of extensions: 384073
Number of successful extensions: 657
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 585
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 657
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1889780269
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)