Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0514
         (711 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D56E65 Cluster: PREDICTED: similar to CG1685-PA;...    37   0.56 
UniRef50_Q094J0 Cluster: Transcriptional regulator, AraC family ...    36   1.3  
UniRef50_UPI00015B5D11 Cluster: PREDICTED: similar to LOC398471 ...    35   2.3  
UniRef50_Q7FZR6 Cluster: T6L9.2 protein; n=1; Arabidopsis thalia...    33   9.2  

>UniRef50_UPI0000D56E65 Cluster: PREDICTED: similar to CG1685-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG1685-PA - Tribolium castaneum
          Length = 602

 Score = 36.7 bits (81), Expect = 0.56
 Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 7/69 (10%)
 Frame = +2

Query: 521 ELHNMLKGP--YKSIALTHDLSRVIPVLLKHSLKXLLNGITKELL----DLIGTD-GSIL 679
           +LH++LKG   Y    L HD SR++  LLK+S   +   I++EL+    D++ +  G   
Sbjct: 117 KLHSLLKGKGHYAKFVLAHDTSRIVQWLLKYSSDIVKQQISQELIPVTVDMLQSKYGIFC 176

Query: 680 STRLLPLGD 706
           + RLL  G+
Sbjct: 177 AKRLLKYGN 185


>UniRef50_Q094J0 Cluster: Transcriptional regulator, AraC family
           protein; n=1; Stigmatella aurantiaca DW4/3-1|Rep:
           Transcriptional regulator, AraC family protein -
           Stigmatella aurantiaca DW4/3-1
          Length = 657

 Score = 35.5 bits (78), Expect = 1.3
 Identities = 20/54 (37%), Positives = 28/54 (51%)
 Frame = -1

Query: 702 PNGRRRVLRMDPSVPIRSRSSFVIPFNNXFRLCFSRTGITRLRSCVRAIDLYGP 541
           P G  + LR+D S+P RS +   +     F + F R  +TR R   RA+ L GP
Sbjct: 434 PQGDDQALRVDVSMPERSHARLRVDMELAFLVSFGRV-MTRTRIIPRAVSLRGP 486


>UniRef50_UPI00015B5D11 Cluster: PREDICTED: similar to LOC398471
           protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
           similar to LOC398471 protein - Nasonia vitripennis
          Length = 658

 Score = 34.7 bits (76), Expect = 2.3
 Identities = 16/49 (32%), Positives = 27/49 (55%)
 Frame = +2

Query: 500 LQNNSCKELHNMLKGPYKSIALTHDLSRVIPVLLKHSLKXLLNGITKEL 646
           +Q    K+LH++++  Y  +   HDLSRVI   +K+    +   I +EL
Sbjct: 168 MQEKLTKKLHDLIQNQYAKMIFAHDLSRVIQWQIKYCNPDIQLAIVQEL 216


>UniRef50_Q7FZR6 Cluster: T6L9.2 protein; n=1; Arabidopsis
           thaliana|Rep: T6L9.2 protein - Arabidopsis thaliana
           (Mouse-ear cress)
          Length = 783

 Score = 32.7 bits (71), Expect = 9.2
 Identities = 22/68 (32%), Positives = 30/68 (44%)
 Frame = +3

Query: 288 KGSKFVKTKEKSNFSKDEANGXXXXXXXXXXXXXQLRTVRRKAKITAEVFEISHKAKLLA 467
           KG+K V T  K+   K  A G             QL   R   K  AEV + +HK KL+ 
Sbjct: 659 KGTKSVATVSKAIAEKSIAKGSKSPVKKSQLLDSQLHLRRSPRKGVAEVIKTNHKCKLMD 718

Query: 468 AXIQRKVV 491
              +++VV
Sbjct: 719 ISGRKQVV 726


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 495,387,909
Number of Sequences: 1657284
Number of extensions: 7193794
Number of successful extensions: 20255
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20187
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57024798702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)