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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0513
         (657 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_1063 - 22628642-22628716,22628806-22629012,22629325-226294...    29   2.5  
07_01_0893 + 7484598-7484744,7484837-7484902,7494387-7494530,749...    29   2.5  
04_03_0256 - 13564070-13564456,13564543-13565299,13565734-135665...    29   2.5  
11_03_0183 - 11310671-11313625,11314243-11314287,11314550-11314717     29   3.3  
11_04_0277 + 15698160-15698271,15698527-15698927                       29   4.3  
09_06_0183 - 21406474-21406636,21407412-21407956                       29   4.3  
12_02_0121 + 13919496-13919734,13919821-13919982,13920102-13920534     28   5.7  
04_03_0999 - 21600231-21600788,21600896-21601056,21601149-216012...    28   5.7  
11_01_0450 - 3487464-3487844,3487883-3488268,3488883-3489033,348...    28   7.5  
09_04_0163 - 15249816-15249920,15250032-15250163,15250463-152506...    28   7.5  
04_04_0824 - 28399144-28399385,28400193-28400312,28400422-284004...    28   7.5  
03_06_0120 + 31804301-31804412,31804525-31804631,31804714-318047...    28   7.5  
03_02_0522 + 9103357-9103437,9103538-9103592,9103687-9103739,910...    28   7.5  
02_02_0704 + 13095449-13095584,13095671-13095990,13096102-130964...    28   7.5  
07_03_0439 + 18212584-18213065,18214164-18215010                       27   9.9  
03_05_0908 + 28686855-28687328                                         27   9.9  
03_05_0657 - 26506423-26506832,26507163-26507721                       27   9.9  

>10_08_1063 -
           22628642-22628716,22628806-22629012,22629325-22629433,
           22629547-22629657,22630466-22630513,22630636-22630713,
           22632151-22632254,22632360-22632470,22632555-22632791
          Length = 359

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = +2

Query: 410 PLARGVPLQPLPHRVPVQGDGGQGLRHPVQPSRR 511
           P+ RG   Q  PH++  + D G G+++P  P+++
Sbjct: 322 PMQRGAGAQSHPHQLRRKADQGMGMQNPGYPTQQ 355


>07_01_0893 +
           7484598-7484744,7484837-7484902,7494387-7494530,
           7494860-7495235,7495904-7496017,7496282-7496454,
           7496562-7496669,7497311-7497377,7497791-7497904,
           7498121-7498257,7498727-7498813,7498962-7498986,
           7499044-7499266,7499770-7499947,7500039-7500152,
           7500249-7500380,7500488-7500588,7500720-7500933
          Length = 839

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = +1

Query: 10  SARKAATMVDAATLEKLEAG-FSKLQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTLLDC 186
           S  K   + + + +++ + G F K    D  S + K+ TRE+ D+   K     + +LDC
Sbjct: 94  SVWKGGMIKEYSKMDECKTGDFGKRPLIDDISTVCKWFTRELSDTTYGKNAQLAAKVLDC 153

Query: 187 I 189
           +
Sbjct: 154 V 154


>04_03_0256 -
           13564070-13564456,13564543-13565299,13565734-13566535,
           13566884-13566917
          Length = 659

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 4/96 (4%)
 Frame = -3

Query: 577 RRMSCCWVSFDMP----VRW*NVPLSSPRRLDRVPETLSSISLYWDSVRQGLKGYPSSER 410
           +R    W SFD P    V   ++      + +  P   +   +Y   ++ G+ GY  S  
Sbjct: 164 QRNGTVWQSFDHPTDALVPGQSLLQGMILKANTSPTNWTESKIYITILQDGVYGYVESTP 223

Query: 409 PQRTRVETTNSPAGSRLPSVSTSPQFLGGCLSVFLK 302
           PQ       ++    R+P+  T   F  GC S+F++
Sbjct: 224 PQLYYNYVVSTNKSKRVPTTVT---FTNGCFSIFVQ 256


>11_03_0183 - 11310671-11313625,11314243-11314287,11314550-11314717
          Length = 1055

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
 Frame = -2

Query: 170 DPNEVFLFFRLSNTSLVRYFFSSDLE-SDPWSLLKPASNFSRVAASTIVAAFLA 12
           D +++ L    +   LV YF+      SD  SLL   SNF+R+A+ + ++ F++
Sbjct: 139 DASKLALKHTRAGAPLVAYFWDKTFAWSDASSLLPFCSNFTRLASQSTMSGFVS 192


>11_04_0277 + 15698160-15698271,15698527-15698927
          Length = 170

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +2

Query: 530 PSHRHVEGDPAAAHSTTTSLFKEGDRFPAG 619
           PS + V+G  AAA +  TS F+     PAG
Sbjct: 9   PSSKEVQGGQAAAAAAETSYFRSAPVLPAG 38


>09_06_0183 - 21406474-21406636,21407412-21407956
          Length = 235

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
 Frame = +2

Query: 437 PLPHRVPVQGDGGQ-----GLRHPVQPSRRAQGHVLPSHRHVEGDPAAAHSTTTSLFKEG 601
           P+ H  P +G+ G+      +R P +  R  +G  +   + VE   + + S  T +    
Sbjct: 160 PVGHAAP-RGERGEVVVATRIRRPRKRRREKKGRRMQEEKRVEASGSFSRSLATQVGPSP 218

Query: 602 DRFPAGRQR 628
           DR+P  R R
Sbjct: 219 DRWPQSRNR 227


>12_02_0121 + 13919496-13919734,13919821-13919982,13920102-13920534
          Length = 277

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 21/69 (30%), Positives = 28/69 (40%)
 Frame = +2

Query: 437 PLPHRVPVQGDGGQGLRHPVQPSRRAQGHVLPSHRHVEGDPAAAHSTTTSLFKEGDRFPA 616
           P P R   +   GQ  R   + SRR QG  L  + + +GD A  +     L   G  FP 
Sbjct: 50  PSPPRSGRKRGAGQRRRRTEEESRRPQGEGLWIYHYEDGDVAYENDFHRPLCTSG-HFPR 108

Query: 617 GRQRLAAFW 643
             +   A W
Sbjct: 109 LEKLFMAAW 117


>04_03_0999 -
           21600231-21600788,21600896-21601056,21601149-21601241,
           21601379-21601531,21601917-21601992,21602078-21602197,
           21602348-21602597,21602917-21603008,21603408-21603581
          Length = 558

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = -3

Query: 415 ERPQRTRVETTNSPAGSRLPSVSTSPQFLGGCLSVF 308
           +RP+ +RV  T     +R+P   +  +++ G LS F
Sbjct: 36  KRPRSSRVAQTRPQPEARIPGTQSDSEYMSGQLSAF 71


>11_01_0450 -
           3487464-3487844,3487883-3488268,3488883-3489033,
           3489132-3491102,3492090-3492149,3492240-3492436,
           3492678-3492963
          Length = 1143

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 15/40 (37%), Positives = 18/40 (45%)
 Frame = +2

Query: 428 PLQPLPHRVPVQGDGGQGLRHPVQPSRRAQGHVLPSHRHV 547
           P  PLP     +G GG+    PV   R  + HVL  H  V
Sbjct: 33  PPSPLPVEEAARGRGGEEEDPPVMFGRHPECHVLVDHPSV 72


>09_04_0163 -
           15249816-15249920,15250032-15250163,15250463-15250629,
           15251259-15251448,15252530-15252661,15253275-15253382,
           15253513-15253608,15253702-15253809,15253917-15254089,
           15255026-15255401,15255887-15256030,15256125-15256799,
           15256917-15256982,15257082-15257249
          Length = 879

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
 Frame = +1

Query: 10  SARKAATMVDAATLEKLEAG-FSKLQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTLLDC 186
           S  K   + + + +++ + G F K    D  S + K+ TRE  D+   K     + +LDC
Sbjct: 326 SVWKGGMIKEYSKIDECKTGDFGKRPLIDDISTVCKWFTREHSDTTYGKNAQLAAKVLDC 385

Query: 187 I 189
           +
Sbjct: 386 V 386


>04_04_0824 -
           28399144-28399385,28400193-28400312,28400422-28400453,
           28400531-28400625,28400713-28400786,28400883-28401018,
           28401096-28401333,28401508-28401555,28401593-28401780,
           28401862-28401983,28402061-28402226,28402321-28402443,
           28403068-28403139,28403244-28403351,28404212-28404328,
           28404458-28404596,28404702-28404808,28404904-28405013,
           28405141-28405274,28405348-28405497,28405571-28405791,
           28405868-28406677,28410261-28410473
          Length = 1254

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 14/33 (42%), Positives = 14/33 (42%)
 Frame = +2

Query: 461 QGDGGQGLRHPVQPSRRAQGHVLPSHRHVEGDP 559
           QG GGQG  HP       QG   P   H  G P
Sbjct: 145 QGRGGQGSHHPGGGPPEYQGRGGPGSHHPGGGP 177


>03_06_0120 +
           31804301-31804412,31804525-31804631,31804714-31804756,
           31806069-31806187
          Length = 126

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 12/23 (52%), Positives = 18/23 (78%)
 Frame = +1

Query: 511 SSRARSTISQACRRRPSSSSFDD 579
           ++RA++T + A RRR SSS+ DD
Sbjct: 14  AARAKATAAPAARRRMSSSAHDD 36


>03_02_0522 +
           9103357-9103437,9103538-9103592,9103687-9103739,
           9103832-9104060,9104149-9104284,9104448-9104496,
           9105123-9105248,9106003-9106110,9106255-9106395
          Length = 325

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 17/60 (28%), Positives = 30/60 (50%)
 Frame = -2

Query: 422 LERAAAAHAGGDHELAGGVEVAERVHVSPVLGRVLVGLLEAIVVVLDDRVKQLGEHEYDS 243
           L+  A AHA   +   G  E+  RVHV P +     G L+++ + L    ++  + +YD+
Sbjct: 86  LQAQAQAHAAAANGFLGHTEL--RVHVPPTIALATRGRLQSLRLQLALLDREFDDLDYDA 143


>02_02_0704 +
           13095449-13095584,13095671-13095990,13096102-13096423,
           13096556-13096632,13096744-13097127
          Length = 412

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -2

Query: 224 PTPESKFSTPDWMQS 180
           P PE+K  TPDW+QS
Sbjct: 117 PPPEAKKVTPDWLQS 131


>07_03_0439 + 18212584-18213065,18214164-18215010
          Length = 442

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 10/43 (23%), Positives = 21/43 (48%)
 Frame = -3

Query: 472 SISLYWDSVRQGLKGYPSSERPQRTRVETTNSPAGSRLPSVST 344
           ++S +WD+     +G  ++  P   R  +TN P+ +    + T
Sbjct: 29  TVSTHWDAASHEARGAAAASSPTSPRAASTNPPSATSAEPLHT 71


>03_05_0908 + 28686855-28687328
          Length = 157

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +3

Query: 27 NNGRRRNPREIGGWFQQAPG 86
          ++G R +PRE+ GWF  A G
Sbjct: 26 SHGARPSPRELQGWFAAAAG 45


>03_05_0657 - 26506423-26506832,26507163-26507721
          Length = 322

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -3

Query: 649 GGPESCKALAACRKAVALLEQGSGRRMSC 563
           GG  +C  +AACR+ + L   G  +R  C
Sbjct: 37  GGGGACCPVAACRRLLRLCNHGFKKRRGC 65


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.316    0.129    0.384 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,930,595
Number of Sequences: 37544
Number of extensions: 427407
Number of successful extensions: 1817
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1817
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)

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