Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0513
(657 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75714-4|CAB00062.1| 360|Caenorhabditis elegans Hypothetical pr... 141 3e-34
U41543-2|AAO21426.1| 359|Caenorhabditis elegans Hypothetical pr... 128 3e-30
U41543-1|AAB37022.2| 396|Caenorhabditis elegans Hypothetical pr... 128 3e-30
AF043703-6|AAK21503.1| 399|Caenorhabditis elegans Hypothetical ... 121 5e-28
AF003148-10|AAB54206.2| 427|Caenorhabditis elegans Hypothetical... 121 5e-28
Z83109-2|CAB05517.1| 372|Caenorhabditis elegans Hypothetical pr... 120 7e-28
AF106575-6|AAC78175.2| 244|Caenorhabditis elegans Hypothetical ... 62 4e-10
AC084159-16|AAK39357.1| 205|Caenorhabditis elegans Hypothetical... 30 1.3
Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical pr... 29 3.8
U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical pr... 29 3.8
U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical pr... 29 3.8
U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z69361-3|CAA93289.1| 533|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z68882-20|CAA93112.1| 533|Caenorhabditis elegans Hypothetical p... 28 5.1
AL032644-1|CAA21666.2| 604|Caenorhabditis elegans Hypothetical ... 28 5.1
Z73969-19|CAJ43440.1| 548|Caenorhabditis elegans Hypothetical p... 27 8.9
Z73969-2|CAA98233.1| 611|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z73969-1|CAA98232.1| 589|Caenorhabditis elegans Hypothetical pr... 27 8.9
U40945-6|AAS80346.1| 437|Caenorhabditis elegans Hypothetical pr... 27 8.9
U40945-5|AAS80344.1| 617|Caenorhabditis elegans Hypothetical pr... 27 8.9
>Z75714-4|CAB00062.1| 360|Caenorhabditis elegans Hypothetical
protein ZC434.8 protein.
Length = 360
Score = 141 bits (342), Expect = 3e-34
Identities = 68/127 (53%), Positives = 92/127 (72%), Gaps = 3/127 (2%)
Frame = +3
Query: 258 FAELFDPIIEDYHNGFKKTDKHPPKNWGD--VDTLGNLDPAGEFVVSTRVRCGRSLEGYP 431
FA+LF+P+IE+YHNGFK TD P + G+ V L +LDP G+F+VSTR+RCGRSL+GYP
Sbjct: 79 FADLFNPVIEEYHNGFKATDTQPAMDLGEKNVGELADLDPEGKFIVSTRIRCGRSLQGYP 138
Query: 432 FNPCLTESQYKEMEDKVSGTLSSLRG-ELKGTFYHLTGMSKETQQQLIRRPLPCSRRATA 608
FNPCL+E+ YK ME ++ +S+ ELKGT+Y LTGM +ET+++LI +
Sbjct: 139 FNPCLSETNYKMMETRMKEIFNSITDPELKGTYYPLTGMDEETKKKLIADHF-LFKEGDR 197
Query: 609 FLQAANA 629
FL+AANA
Sbjct: 198 FLKAANA 204
Score = 89.4 bits (212), Expect = 2e-18
Identities = 45/69 (65%), Positives = 55/69 (79%), Gaps = 1/69 (1%)
Frame = +1
Query: 52 EKLEAGFSKLQG-SDSKSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVENLDSGVGI 228
+ +E ++KLQG SD SLLKK+LT++V K+KKT G+TLLD IQSG ENLDSGVGI
Sbjct: 9 KSIEEVYTKLQGASDCSSLLKKHLTKDVVAKNKSKKTRLGATLLDVIQSGGENLDSGVGI 68
Query: 229 YAPDAESYS 255
YAPDAESY+
Sbjct: 69 YAPDAESYT 77
>U41543-2|AAO21426.1| 359|Caenorhabditis elegans Hypothetical
protein F46H5.3b protein.
Length = 359
Score = 128 bits (309), Expect = 3e-30
Identities = 65/127 (51%), Positives = 83/127 (65%), Gaps = 3/127 (2%)
Frame = +3
Query: 258 FAELFDPIIEDYHNGFKKTDKHPPKNWGDVDT--LGNLDPAGEFVVSTRVRCGRSLEGYP 431
F LFDP+I+DYHNGF K P + G+ T L +LDP G+F+ STR+RCGRSL+GYP
Sbjct: 79 FKPLFDPLIQDYHNGFAPDAKQPNTDLGEGKTSALVDLDPEGKFINSTRIRCGRSLQGYP 138
Query: 432 FNPCLTESQYKEMEDKVSGTLSSLRG-ELKGTFYHLTGMSKETQQQLIRRPLPCSRRATA 608
FNPCL+E+ Y EME KV ++ EL G ++ L GM+KE Q QLI+ +
Sbjct: 139 FNPCLSEANYLEMESKVKAIFDNITDPELAGKYFPLDGMTKEIQDQLIKDHF-LFKEGDR 197
Query: 609 FLQAANA 629
FLQAANA
Sbjct: 198 FLQAANA 204
Score = 96.3 bits (229), Expect = 2e-20
Identities = 46/75 (61%), Positives = 58/75 (77%), Gaps = 1/75 (1%)
Frame = +1
Query: 34 VDAATLEKLEAGFSKLQGS-DSKSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVENL 210
V + K+E G++KLQ + + SLLKKYLT+EV D LK+KKT G+ LLD IQSGV NL
Sbjct: 3 VSPDVIAKIEEGYAKLQAAPECHSLLKKYLTKEVVDQLKDKKTKLGANLLDVIQSGVANL 62
Query: 211 DSGVGIYAPDAESYS 255
DSGVG+YAPDAE+Y+
Sbjct: 63 DSGVGVYAPDAEAYT 77
>U41543-1|AAB37022.2| 396|Caenorhabditis elegans Hypothetical
protein F46H5.3a protein.
Length = 396
Score = 128 bits (309), Expect = 3e-30
Identities = 65/127 (51%), Positives = 83/127 (65%), Gaps = 3/127 (2%)
Frame = +3
Query: 258 FAELFDPIIEDYHNGFKKTDKHPPKNWGDVDT--LGNLDPAGEFVVSTRVRCGRSLEGYP 431
F LFDP+I+DYHNGF K P + G+ T L +LDP G+F+ STR+RCGRSL+GYP
Sbjct: 116 FKPLFDPLIQDYHNGFAPDAKQPNTDLGEGKTSALVDLDPEGKFINSTRIRCGRSLQGYP 175
Query: 432 FNPCLTESQYKEMEDKVSGTLSSLRG-ELKGTFYHLTGMSKETQQQLIRRPLPCSRRATA 608
FNPCL+E+ Y EME KV ++ EL G ++ L GM+KE Q QLI+ +
Sbjct: 176 FNPCLSEANYLEMESKVKAIFDNITDPELAGKYFPLDGMTKEIQDQLIKDHF-LFKEGDR 234
Query: 609 FLQAANA 629
FLQAANA
Sbjct: 235 FLQAANA 241
Score = 97.1 bits (231), Expect = 1e-20
Identities = 48/85 (56%), Positives = 63/85 (74%), Gaps = 1/85 (1%)
Frame = +1
Query: 4 CSSARKAATMVDAATLEKLEAGFSKLQGS-DSKSLLKKYLTREVFDSLKNKKTSFGSTLL 180
C A++ + V + K+E G++KLQ + + SLLKKYLT+EV D LK+KKT G+ LL
Sbjct: 31 CVQAQEGMS-VSPDVIAKIEEGYAKLQAAPECHSLLKKYLTKEVVDQLKDKKTKLGANLL 89
Query: 181 DCIQSGVENLDSGVGIYAPDAESYS 255
D IQSGV NLDSGVG+YAPDAE+Y+
Sbjct: 90 DVIQSGVANLDSGVGVYAPDAEAYT 114
>AF043703-6|AAK21503.1| 399|Caenorhabditis elegans Hypothetical
protein W10C8.5 protein.
Length = 399
Score = 121 bits (291), Expect = 5e-28
Identities = 66/127 (51%), Positives = 78/127 (61%), Gaps = 3/127 (2%)
Frame = +3
Query: 258 FAELFDPIIEDYHNGFKKTDKHPPKNWGDVDT--LGNLDPAGEFVVSTRVRCGRSLEGYP 431
FA LFD IIEDYH GF K PP + G+ T LDP G+++ STR+RCGRSL+GYP
Sbjct: 119 FAPLFDKIIEDYH-GFSPKQKQPPVDLGEGKTKEFPPLDPKGKYIKSTRIRCGRSLKGYP 177
Query: 432 FNPCLTESQYKEMEDKVSGTLSSLRG-ELKGTFYHLTGMSKETQQQLIRRPLPCSRRATA 608
FNPCLT+ Y EME KV S ELKG +Y L GM K+TQ+QLI +
Sbjct: 178 FNPCLTQDNYLEMEGKVKKAFSEYSDKELKGKYYPLDGMGKDTQKQLIADHF-LFKEGDR 236
Query: 609 FLQAANA 629
LQ ANA
Sbjct: 237 HLQYANA 243
Score = 99 bits (238), Expect = 1e-21
Identities = 46/82 (56%), Positives = 65/82 (79%), Gaps = 3/82 (3%)
Frame = +1
Query: 19 KAATMVDAATLEKLEAGFSKLQGSDS---KSLLKKYLTREVFDSLKNKKTSFGSTLLDCI 189
+A + VDAAT++K+E ++KL G + KSLLKK+LT++V + LK K+T G+TL DCI
Sbjct: 36 QAKSEVDAATIKKIEEAYAKLNGPEGAKCKSLLKKHLTKDVVEKLKTKRTKLGATLYDCI 95
Query: 190 QSGVENLDSGVGIYAPDAESYS 255
+SGV NLD+GVG+YAPDAE+Y+
Sbjct: 96 RSGVYNLDAGVGVYAPDAEAYT 117
>AF003148-10|AAB54206.2| 427|Caenorhabditis elegans Hypothetical
protein F32B5.1 protein.
Length = 427
Score = 121 bits (291), Expect = 5e-28
Identities = 66/127 (51%), Positives = 78/127 (61%), Gaps = 3/127 (2%)
Frame = +3
Query: 258 FAELFDPIIEDYHNGFKKTDKHPPKNWGDVDT--LGNLDPAGEFVVSTRVRCGRSLEGYP 431
FA LFD IIEDYH GF K PP + G+ T LDP G+++ STR+RCGRSL+GYP
Sbjct: 147 FAPLFDKIIEDYH-GFSPKQKQPPVDLGEGKTKEFPPLDPKGKYIKSTRIRCGRSLKGYP 205
Query: 432 FNPCLTESQYKEMEDKVSGTLSSLRG-ELKGTFYHLTGMSKETQQQLIRRPLPCSRRATA 608
FNPCLT+ Y EME KV S ELKG +Y L GM K+TQ+QLI +
Sbjct: 206 FNPCLTQDNYLEMEGKVKKAFSEYSDKELKGKYYPLDGMGKDTQKQLIADHF-LFKEGDR 264
Query: 609 FLQAANA 629
LQ ANA
Sbjct: 265 HLQYANA 271
Score = 100 bits (240), Expect = 8e-22
Identities = 47/82 (57%), Positives = 65/82 (79%), Gaps = 3/82 (3%)
Frame = +1
Query: 19 KAATMVDAATLEKLEAGFSKLQGSDS---KSLLKKYLTREVFDSLKNKKTSFGSTLLDCI 189
+A + VDAAT++K+E ++KL G + KSLLKK+LT+EV + LK K+T G+TL DCI
Sbjct: 64 QAKSEVDAATIKKIEEAYAKLNGPEGAKCKSLLKKHLTKEVVEKLKTKRTKVGATLYDCI 123
Query: 190 QSGVENLDSGVGIYAPDAESYS 255
+SGV NLD+GVG+YAPDAE+Y+
Sbjct: 124 RSGVYNLDAGVGVYAPDAEAYT 145
>Z83109-2|CAB05517.1| 372|Caenorhabditis elegans Hypothetical
protein F44G3.2 protein.
Length = 372
Score = 120 bits (290), Expect = 7e-28
Identities = 67/127 (52%), Positives = 77/127 (60%), Gaps = 3/127 (2%)
Frame = +3
Query: 258 FAELFDPIIEDYHNGFKKTDKHPPKNWGDVDT--LGNLDPAGEFVVSTRVRCGRSLEGYP 431
FA LFD IIEDYH G K PP + G+ T LDP G+++ STR+RCGRSL GY
Sbjct: 92 FAPLFDKIIEDYH-GLGPDQKQPPVDLGEGKTKEFPPLDPKGKYIKSTRIRCGRSLNGYQ 150
Query: 432 FNPCLTESQYKEMEDKVSGTLSSLRG-ELKGTFYHLTGMSKETQQQLIRRPLPCSRRATA 608
FNPCLTE Y EME+KV S ELKGT+Y L GMSK+TQ QLI +
Sbjct: 151 FNPCLTEDNYLEMEEKVKKAFSEFSDEELKGTYYPLDGMSKDTQNQLIADHF-LFKEGDR 209
Query: 609 FLQAANA 629
LQ ANA
Sbjct: 210 HLQYANA 216
Score = 79.4 bits (187), Expect = 2e-15
Identities = 39/77 (50%), Positives = 52/77 (67%), Gaps = 3/77 (3%)
Frame = +1
Query: 34 VDAATLEKLEAGFSKLQGSDS---KSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVE 204
VD T++K+E + L G D SLLKK LT++V + LK K T G+ L DCI+SGV
Sbjct: 14 VDPVTIKKIEEAYVMLNGPDGAKCSSLLKKNLTKDVIEKLKTKSTKLGANLYDCIRSGVY 73
Query: 205 NLDSGVGIYAPDAESYS 255
LD+ VG+YAPDAE+Y+
Sbjct: 74 CLDALVGVYAPDAEAYT 90
>AF106575-6|AAC78175.2| 244|Caenorhabditis elegans Hypothetical
protein K04F1.1 protein.
Length = 244
Score = 61.7 bits (143), Expect = 4e-10
Identities = 30/75 (40%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Frame = +1
Query: 19 KAATMVDAATLEKLEAGFSKLQGSDS---KSLLKKYLTREVFDSLKNKKTSFGSTLLDCI 189
+A + VDAAT++K+E + KL G + KSLL+KYLT+++ + LK K T G+++ DCI
Sbjct: 86 QAKSEVDAATIKKIEEAYVKLNGPEGAKCKSLLRKYLTKDIVEKLKTKCTKLGASVYDCI 145
Query: 190 QSGVENLDSGVGIYA 234
+G+ + G+ A
Sbjct: 146 LTGLRFVRQGLRFVA 160
>AC084159-16|AAK39357.1| 205|Caenorhabditis elegans Hypothetical
protein Y73B3A.7 protein.
Length = 205
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = -3
Query: 448 VRQGLKGYPSSERPQRTRVETTNSPAGSRLP-SVSTSPQFLGGCLSV 311
VR+ + GY + + ++++TN+P SRLP + Q LGG L +
Sbjct: 47 VRKSIMGYRGKRKTDQ-QLKSTNNPTSSRLPLNTKNVAQALGGRLHI 92
>Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical protein
R10E11.1b protein.
Length = 2056
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +2
Query: 416 ARGVPLQPL-PHRVPVQGDGGQGLRHPVQPSRRAQGHVLPSHRHVEGDPAAAH 571
A G QP+ +P+Q GG G +P Q ++ QGH P ++ G P H
Sbjct: 1769 APGQQQQPMYSSGMPMQRPGGLGGMNPQQQPQQQQGH--PGLQNPGGRPGGVH 1819
>Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical protein
R10E11.1a protein.
Length = 2045
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +2
Query: 416 ARGVPLQPL-PHRVPVQGDGGQGLRHPVQPSRRAQGHVLPSHRHVEGDPAAAH 571
A G QP+ +P+Q GG G +P Q ++ QGH P ++ G P H
Sbjct: 1758 APGQQQQPMYSSGMPMQRPGGLGGMNPQQQPQQQQGH--PGLQNPGGRPGGVH 1808
>U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical
protein R07G3.3c protein.
Length = 1316
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +1
Query: 7 SSARKAATMVDAATLEKLEAGFSKLQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTLLDC 186
+SA +AA + + +L A + + S+++ K T+ FDSLK + F + D
Sbjct: 530 ASAAQAAINAQSEEMAQLRADLAVTKKSEAELKTKVEQTKAAFDSLKERTEHFKELVRDS 589
Query: 187 I 189
+
Sbjct: 590 V 590
>U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical
protein R07G3.3a protein.
Length = 1982
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +1
Query: 7 SSARKAATMVDAATLEKLEAGFSKLQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTLLDC 186
+SA +AA + + +L A + + S+++ K T+ FDSLK + F + D
Sbjct: 530 ASAAQAAINAQSEEMAQLRADLAVTKKSEAELKTKVEQTKAAFDSLKERTEHFKELVRDS 589
Query: 187 I 189
+
Sbjct: 590 V 590
>U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical
protein R07G3.3b protein.
Length = 1987
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +1
Query: 7 SSARKAATMVDAATLEKLEAGFSKLQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTLLDC 186
+SA +AA + + +L A + + S+++ K T+ FDSLK + F + D
Sbjct: 530 ASAAQAAINAQSEEMAQLRADLAVTKKSEAELKTKVEQTKAAFDSLKERTEHFKELVRDS 589
Query: 187 I 189
+
Sbjct: 590 V 590
>Z69361-3|CAA93289.1| 533|Caenorhabditis elegans Hypothetical
protein T13H10.1 protein.
Length = 533
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = -3
Query: 520 PLSSPRRLDRVPETLSSISLYWDSVRQGLKGYPSSERPQRTRVETTNSPA 371
P P R ++ E S+S +S +G+K + RP RTR+ NSP+
Sbjct: 424 PPFEPERQEKTQEMRKSMS---NSAEEGVK---KNRRPVRTRIRNGNSPS 467
>Z68882-20|CAA93112.1| 533|Caenorhabditis elegans Hypothetical
protein T13H10.1 protein.
Length = 533
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = -3
Query: 520 PLSSPRRLDRVPETLSSISLYWDSVRQGLKGYPSSERPQRTRVETTNSPA 371
P P R ++ E S+S +S +G+K + RP RTR+ NSP+
Sbjct: 424 PPFEPERQEKTQEMRKSMS---NSAEEGVK---KNRRPVRTRIRNGNSPS 467
>AL032644-1|CAA21666.2| 604|Caenorhabditis elegans Hypothetical
protein Y51H1A.2 protein.
Length = 604
Score = 28.3 bits (60), Expect = 5.1
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
Frame = +1
Query: 4 CSSARKAATMVDAATLEKLEAGFSKLQGSDSKSLLKKYLTREVF--DSLKNKKTSFGSTL 177
CSS +M+D+ + A L+GS S S+ + +++ S T ST+
Sbjct: 277 CSSVYSHPSMLDSGEMSYQHAVLGGLKGSSSSSMRRVASNQKIQLPQSPLFSSTPVDSTI 336
Query: 178 LDCIQSGVEN--LD--SGVGIYAPDA 243
LD ++ G N LD V APDA
Sbjct: 337 LDQVKIGKANSRLDFVQTVSDVAPDA 362
>Z73969-19|CAJ43440.1| 548|Caenorhabditis elegans Hypothetical
protein C12D8.1c protein.
Length = 548
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +3
Query: 42 RNPREIGGWFQQAPGIRL*VAAEEVPYQGS-IRQPEEQ 152
+NP ++GGW Q + + A PY + I QP++Q
Sbjct: 391 QNPYQVGGWQQNSVYAQQTAAPAAAPYAAAGIVQPQQQ 428
>Z73969-2|CAA98233.1| 611|Caenorhabditis elegans Hypothetical
protein C12D8.1b protein.
Length = 611
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +3
Query: 42 RNPREIGGWFQQAPGIRL*VAAEEVPYQGS-IRQPEEQ 152
+NP ++GGW Q + + A PY + I QP++Q
Sbjct: 454 QNPYQVGGWQQNSVYAQQTAAPAAAPYAAAGIVQPQQQ 491
>Z73969-1|CAA98232.1| 589|Caenorhabditis elegans Hypothetical
protein C12D8.1a protein.
Length = 589
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +3
Query: 42 RNPREIGGWFQQAPGIRL*VAAEEVPYQGS-IRQPEEQ 152
+NP ++GGW Q + + A PY + I QP++Q
Sbjct: 432 QNPYQVGGWQQNSVYAQQTAAPAAAPYAAAGIVQPQQQ 469
>U40945-6|AAS80346.1| 437|Caenorhabditis elegans Hypothetical
protein F10D7.5c protein.
Length = 437
Score = 27.5 bits (58), Expect = 8.9
Identities = 19/60 (31%), Positives = 26/60 (43%)
Frame = -3
Query: 520 PLSSPRRLDRVPETLSSISLYWDSVRQGLKGYPSSERPQRTRVETTNSPAGSRLPSVSTS 341
PLS PRR R+P+ S S Y P + P R V + S P++ST+
Sbjct: 250 PLSIPRRPARIPDGAPSSSSYLAPAVPARAPPPVPQSPLRVNVR-DSLEGSSSTPALSTT 308
>U40945-5|AAS80344.1| 617|Caenorhabditis elegans Hypothetical
protein F10D7.5a protein.
Length = 617
Score = 27.5 bits (58), Expect = 8.9
Identities = 19/60 (31%), Positives = 26/60 (43%)
Frame = -3
Query: 520 PLSSPRRLDRVPETLSSISLYWDSVRQGLKGYPSSERPQRTRVETTNSPAGSRLPSVSTS 341
PLS PRR R+P+ S S Y P + P R V + S P++ST+
Sbjct: 430 PLSIPRRPARIPDGAPSSSSYLAPAVPARAPPPVPQSPLRVNVR-DSLEGSSSTPALSTT 488
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.316 0.129 0.384
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,235,846
Number of Sequences: 27780
Number of extensions: 293909
Number of successful extensions: 1138
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1057
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1120
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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