BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0509 (406 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 149 1e-37 SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 146 2e-36 SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 128 2e-31 SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 124 7e-30 SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 99 3e-22 SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 54 1e-08 SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 46 2e-06 SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 35 0.006 SPAC1A6.08c |mug125||sequence orphan|Schizosaccharomyces pombe|c... 25 4.5 SPCC417.03 |||sequence orphan|Schizosaccharomyces pombe|chr 3|||... 24 7.8 >SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces pombe|chr 3|||Manual Length = 647 Score = 149 bits (362), Expect = 1e-37 Identities = 76/135 (56%), Positives = 88/135 (65%) Frame = +2 Query: 2 KHWPXEVVSNGGKPKIKVAYKGEEKTFFPEEVSXMVLTKMKEXAEAYLGKTVQNAVITVP 181 KHWP +V+S GKP ++V YKGE KTF PEE+S MVL KM+E AEAYLG V +AV+TVP Sbjct: 86 KHWPFKVISKDGKPVLQVEYKGETKTFTPEEISSMVLMKMRETAEAYLGGKVTDAVVTVP 145 Query: 182 AYFNHSQRQATXDAGTISGLNVLRTSMNXXXXXXXXXXXXXXXENEMXLSLTSAAGTFDV 361 AYFN SQRQAT DAG I+GLNVLR L GTFDV Sbjct: 146 AYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQGESNVLIFDLGGGTFDV 205 Query: 362 SILTIEDXIFEVKST 406 S+LTIE+ IFEVK+T Sbjct: 206 SLLTIEEGIFEVKAT 220 >SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces pombe|chr 1|||Manual Length = 644 Score = 146 bits (353), Expect = 2e-36 Identities = 74/135 (54%), Positives = 87/135 (64%) Frame = +2 Query: 2 KHWPXEVVSNGGKPKIKVAYKGEEKTFFPEEVSXMVLTKMKEXAEAYLGKTVQNAVITVP 181 KHWP +V+ GKP I+V +KGE KTF PEE+S MVL KM+E AEA+LG V +AV+TVP Sbjct: 86 KHWPFKVIEKDGKPLIQVEFKGETKTFTPEEISSMVLLKMRESAEAFLGGKVTDAVVTVP 145 Query: 182 AYFNHSQRQATXDAGTISGLNVLRTSMNXXXXXXXXXXXXXXXENEMXLSLTSAAGTFDV 361 AYFN SQRQAT DAG I+GLNVLR L GTFDV Sbjct: 146 AYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQHETNVLIFDLGGGTFDV 205 Query: 362 SILTIEDXIFEVKST 406 S+LTIE+ IFEVK+T Sbjct: 206 SLLTIEEGIFEVKAT 220 >SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces pombe|chr 2|||Manual Length = 613 Score = 128 bits (310), Expect = 2e-31 Identities = 67/135 (49%), Positives = 83/135 (61%) Frame = +2 Query: 2 KHWPXEVVSNGGKPKIKVAYKGEEKTFFPEEVSXMVLTKMKEXAEAYLGKTVQNAVITVP 181 KHWP +V+ N G P I+V Y GE+K F +E+S MVLTKMKE +EA L K V+ AVITVP Sbjct: 90 KHWPFKVIDNNGIPTIEVNYLGEKKQFTAQEISAMVLTKMKEISEAKLNKRVEKAVITVP 149 Query: 182 AYFNHSQRQATXDAGTISGLNVLRTSMNXXXXXXXXXXXXXXXENEMXLSLTSAAGTFDV 361 AYF+ SQR AT DAG I+GLNVLR + + L GTFDV Sbjct: 150 AYFSDSQRAATKDAGAIAGLNVLRIINEPTAAAIAYGLDAKSDKPKNVLIFDLGGGTFDV 209 Query: 362 SILTIEDXIFEVKST 406 S+L I+ +FEV +T Sbjct: 210 SLLKIQGGVFEVLAT 224 >SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||Manual Length = 663 Score = 124 bits (298), Expect = 7e-30 Identities = 62/135 (45%), Positives = 89/135 (65%) Frame = +2 Query: 2 KHWPXEVVSNGGKPKIKVAYKGEEKTFFPEEVSXMVLTKMKEXAEAYLGKTVQNAVITVP 181 K +P +V++ +P ++V G++K F PEE+S M+L+KMK+ AEAYLGK V +AV+TVP Sbjct: 119 KSFPFHIVNDKNRPLVEVNVGGKKKKFTPEEISAMILSKMKQTAEAYLGKPVTHAVVTVP 178 Query: 182 AYFNHSQRQATXDAGTISGLNVLRTSMNXXXXXXXXXXXXXXXENEMXLSLTSAAGTFDV 361 AYFN +QRQAT DAGTI+GLNV+R +N + + GTFDV Sbjct: 179 AYFNDAQRQATKDAGTIAGLNVIRI-VNEPTAAAIAYGLDKTDTEKHIVVYDLGGGTFDV 237 Query: 362 SILTIEDXIFEVKST 406 S+L+I++ +FEV +T Sbjct: 238 SLLSIDNGVFEVLAT 252 >SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces pombe|chr 1|||Manual Length = 674 Score = 98.7 bits (235), Expect = 3e-22 Identities = 51/112 (45%), Positives = 70/112 (62%), Gaps = 1/112 (0%) Frame = +2 Query: 74 KTFFPEEVSXMVLTKMKEXAEAYLGKTVQNAVITVPAYFNHSQRQATXDAGTISGLNVLR 253 KT+ P ++ +L+KM+E A YLGK V+NAV+TVPAYFN SQRQAT AG I+GLNVLR Sbjct: 156 KTYSPSQIGGFILSKMRETASTYLGKDVKNAVVTVPAYFNDSQRQATKAAGAIAGLNVLR 215 Query: 254 TSMNXXXXXXXXXXXXXXXENEMXLSLTS-AAGTFDVSILTIEDXIFEVKST 406 +N+ +++ GTFD+SIL + + +FEV+ST Sbjct: 216 V---VNEPTAAALAYGLDKKNDAIVAVFDLGGGTFDISILELNNGVFEVRST 264 >SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Schizosaccharomyces pombe|chr 1|||Manual Length = 720 Score = 53.6 bits (123), Expect = 1e-08 Identities = 29/68 (42%), Positives = 40/68 (58%) Frame = +2 Query: 50 KVAYKGEEKTFFPEEVSXMVLTKMKEXAEAYLGKTVQNAVITVPAYFNHSQRQATXDAGT 229 KV Y EE F ++ TK+K AEA L +V + VI++PA+F QR+A +A Sbjct: 106 KVQYLNEETAFSNIQLIAAYFTKIKAIAEAELIGSVSDVVISIPAWFTDIQRRALLEAAN 165 Query: 230 ISGLNVLR 253 I+GLN LR Sbjct: 166 IAGLNPLR 173 >SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pombe|chr 1|||Manual Length = 566 Score = 46.4 bits (105), Expect = 2e-06 Identities = 24/62 (38%), Positives = 34/62 (54%) Frame = +2 Query: 68 EEKTFFPEEVSXMVLTKMKEXAEAYLGKTVQNAVITVPAYFNHSQRQATXDAGTISGLNV 247 +EK E S L ++ E AE +LG V V++VP YF +QR+A A +GL V Sbjct: 134 KEKILTAHEASVRHLRRLTESAEDFLGTKVNGCVMSVPVYFTDAQRKALESAANEAGLPV 193 Query: 248 LR 253 L+ Sbjct: 194 LQ 195 >SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 848 Score = 34.7 bits (76), Expect = 0.006 Identities = 18/61 (29%), Positives = 30/61 (49%) Frame = +2 Query: 68 EEKTFFPEEVSXMVLTKMKEXAEAYLGKTVQNAVITVPAYFNHSQRQATXDAGTISGLNV 247 +E+ + EE+ M + AE + + + V+TVP +FN QR +A I +V Sbjct: 131 DEENYSLEEIIAMTMEHYISLAEEMAHEKITDLVLTVPPHFNELQRSILLEAARILNKHV 190 Query: 248 L 250 L Sbjct: 191 L 191 >SPAC1A6.08c |mug125||sequence orphan|Schizosaccharomyces pombe|chr 1|||Manual Length = 285 Score = 25.0 bits (52), Expect = 4.5 Identities = 11/24 (45%), Positives = 16/24 (66%) Frame = +1 Query: 70 RENLFPRGSQXHGAYENEGXCRSL 141 RENLF + + +G E+E CRS+ Sbjct: 51 RENLFFKEMRTNGKNEHETSCRSV 74 >SPCC417.03 |||sequence orphan|Schizosaccharomyces pombe|chr 3|||Manual Length = 100 Score = 24.2 bits (50), Expect = 7.8 Identities = 9/14 (64%), Positives = 11/14 (78%) Frame = -1 Query: 226 TCIXCGLSLRVIEV 185 TC CGLSL ++EV Sbjct: 77 TCFSCGLSLSLMEV 90 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 1,515,264 Number of Sequences: 5004 Number of extensions: 27814 Number of successful extensions: 85 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 73 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 75 length of database: 2,362,478 effective HSP length: 66 effective length of database: 2,032,214 effective search space used: 138190552 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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