BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0509 (406 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 155 1e-38 SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 146 5e-36 SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 126 5e-30 SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 109 6e-25 SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 85 2e-17 SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 1e-10 SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 60 9e-10 SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 1e-07 SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.15 SB_57752| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.3 SB_19938| Best HMM Match : TolA (HMM E-Value=0.22) 27 4.4 SB_45916| Best HMM Match : Cadherin (HMM E-Value=0) 27 4.4 SB_33718| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.8 >SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) Length = 1097 Score = 155 bits (376), Expect = 1e-38 Identities = 78/134 (58%), Positives = 90/134 (67%) Frame = +2 Query: 5 HWPXEVVSNGGKPKIKVAYKGEEKTFFPEEVSXMVLTKMKEXAEAYLGKTVQNAVITVPA 184 HWP V+ G +PKI+V +KGE+K+FFPEE+S MVLTKMKE AEAYLG V +AV+TVPA Sbjct: 89 HWPFHVIREGERPKIQVEFKGEKKSFFPEEISSMVLTKMKETAEAYLGAKVTDAVVTVPA 148 Query: 185 YFNHSQRQATXDAGTISGLNVLRTSMNXXXXXXXXXXXXXXXENEMXLSLTSAAGTFDVS 364 YF+ SQRQAT DAGTI+GLNVLR L GTFDVS Sbjct: 149 YFHDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGVERNVLIYDLGGGTFDVS 208 Query: 365 ILTIEDXIFEVKST 406 +LTIED IFEVKST Sbjct: 209 VLTIEDGIFEVKST 222 >SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) Length = 640 Score = 146 bits (355), Expect = 5e-36 Identities = 78/136 (57%), Positives = 90/136 (66%), Gaps = 1/136 (0%) Frame = +2 Query: 2 KHWPXEVVSNGGKPKIKVAYKGEEKTFFPEEVSXMVLTKMKEXAEAYLGKTVQNAVITVP 181 K WP +++S+ KPKI+V YKGE KTF EE+S MVL KMKE AEAYLG+ V +AVITVP Sbjct: 88 KLWPFKIISDNNKPKIQVEYKGERKTFAAEEISSMVLGKMKETAEAYLGQKVTSAVITVP 147 Query: 182 AYFNHSQRQATXDAGTISGLNVLRTSMNXXXXXXXXXXXXXXXENEMXLSLTSAAGTFDV 361 AYFN SQRQAT DAGTI+GLNVLR + L GTFDV Sbjct: 148 AYFNDSQRQATKDAGTIAGLNVLRVINEPTAAALAYGLDKSLSGEKNVLIFDLGGGTFDV 207 Query: 362 SILTIED-XIFEVKST 406 SILTI+D +FEVKST Sbjct: 208 SILTIDDGSLFEVKST 223 >SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) Length = 1327 Score = 126 bits (305), Expect = 5e-30 Identities = 68/135 (50%), Positives = 85/135 (62%) Frame = +2 Query: 2 KHWPXEVVSNGGKPKIKVAYKGEEKTFFPEEVSXMVLTKMKEXAEAYLGKTVQNAVITVP 181 K +P +VV KP ++V K E KTF EE+S MVLTKMKE AEAYLGK V +AV+TVP Sbjct: 786 KFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISAMVLTKMKETAEAYLGKKVTHAVVTVP 845 Query: 182 AYFNHSQRQATXDAGTISGLNVLRTSMNXXXXXXXXXXXXXXXENEMXLSLTSAAGTFDV 361 AYFN +QRQAT DAG I+GL V+R +N + L GTFDV Sbjct: 846 AYFNDAQRQATKDAGAIAGLTVMRI-INEPTAAAIAYGMDKKEGEKNILVFDLGGGTFDV 904 Query: 362 SILTIEDXIFEVKST 406 S+LTI++ +FEV +T Sbjct: 905 SLLTIDNGVFEVVAT 919 >SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 746 Score = 109 bits (263), Expect = 6e-25 Identities = 59/105 (56%), Positives = 66/105 (62%) Frame = +2 Query: 92 EVSXMVLTKMKEXAEAYLGKTVQNAVITVPAYFNHSQRQATXDAGTISGLNVLRTSMNXX 271 ++S MVL KMKE AEAYLG V +AV+TVPAYFN SQRQAT DAG ISGLNVLR Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAGVISGLNVLRIINEPT 270 Query: 272 XXXXXXXXXXXXXENEMXLSLTSAAGTFDVSILTIEDXIFEVKST 406 + L GTFDVS+L+IED IFEVKST Sbjct: 271 AAAIAYGLDKKVGQERNVLIFDLGGGTFDVSVLSIEDGIFEVKST 315 Score = 107 bits (258), Expect = 3e-24 Identities = 51/70 (72%), Positives = 57/70 (81%) Frame = +2 Query: 17 EVVSNGGKPKIKVAYKGEEKTFFPEEVSXMVLTKMKEXAEAYLGKTVQNAVITVPAYFNH 196 EVV+ G+PK+KV YKGE KTFF EE+S MVL KMKE AEAYLG V +AV+TVPAYFN Sbjct: 118 EVVNEAGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFND 177 Query: 197 SQRQATXDAG 226 SQRQAT DAG Sbjct: 178 SQRQATKDAG 187 >SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) Length = 179 Score = 85.0 bits (201), Expect = 2e-17 Identities = 40/68 (58%), Positives = 55/68 (80%) Frame = +2 Query: 47 IKVAYKGEEKTFFPEEVSXMVLTKMKEXAEAYLGKTVQNAVITVPAYFNHSQRQATXDAG 226 I V GE+++F PE++S +VL ++K AEA+LG+ V+ AVITVPA+FN +QRQAT DAG Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAHFNDAQRQATKDAG 61 Query: 227 TISGLNVL 250 TI+GL+VL Sbjct: 62 TIAGLDVL 69 Score = 37.1 bits (82), Expect = 0.005 Identities = 19/24 (79%), Positives = 19/24 (79%), Gaps = 2/24 (8%) Frame = +1 Query: 256 INEPTAAAIAYGLDKK--GTGERN 321 INEPTAAAIAYGLDK G ERN Sbjct: 96 INEPTAAAIAYGLDKARGGKAERN 119 >SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1068 Score = 62.5 bits (145), Expect = 1e-10 Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 1/84 (1%) Frame = +2 Query: 5 HWPXEVVS-NGGKPKIKVAYKGEEKTFFPEEVSXMVLTKMKEXAEAYLGKTVQNAVITVP 181 H P +VV I+V Y G+++ F PE+V M+ T++K AE L V + VI+VP Sbjct: 145 HLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVMAMLFTRLKTTAEIALKTKVTDCVISVP 204 Query: 182 AYFNHSQRQATXDAGTISGLNVLR 253 +Y+ QR+ DA +GLN LR Sbjct: 205 SYYTDRQRRCMLDASATAGLNCLR 228 >SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) Length = 437 Score = 59.7 bits (138), Expect = 9e-10 Identities = 38/119 (31%), Positives = 55/119 (46%) Frame = +2 Query: 35 GKPKIKVAYKGEEKTFFPEEVSXMVLTKMKEXAEAYLGKTVQNAVITVPAYFNHSQRQAT 214 G V KG PEE+ V+ K++ AE L TV AV++VPA F+ QR AT Sbjct: 129 GNAGFLVGKKGNFTVITPEEIGGYVIKKLRTMAERNLTTTVTKAVMSVPAEFDIKQRNAT 188 Query: 215 XDAGTISGLNVLRTSMNXXXXXXXXXXXXXXXENEMXLSLTSAAGTFDVSILTIEDXIF 391 A +++G+ VLR +N + + GT DVS+L I+ +F Sbjct: 189 VKAASLAGITVLRV-INEPTAAALAYGLHKKEGVANVMVVDLGGGTLDVSLLNIQGGMF 246 >SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1019 Score = 52.8 bits (121), Expect = 1e-07 Identities = 25/71 (35%), Positives = 42/71 (59%) Frame = +2 Query: 41 PKIKVAYKGEEKTFFPEEVSXMVLTKMKEXAEAYLGKTVQNAVITVPAYFNHSQRQATXD 220 P +K Y+ + TF PEE+ M+L + E + +++ V+TVP +FN ++R+A Sbjct: 68 PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVPPFFNQAERRALLR 126 Query: 221 AGTISGLNVLR 253 A + GLNVL+ Sbjct: 127 AAELVGLNVLQ 137 >SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 766 Score = 32.3 bits (70), Expect = 0.15 Identities = 13/20 (65%), Positives = 17/20 (85%) Frame = +2 Query: 347 GTFDVSILTIEDXIFEVKST 406 GTFD+SIL I+ +FEVK+T Sbjct: 10 GTFDISILEIQKGVFEVKAT 29 >SB_57752| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 362 Score = 27.9 bits (59), Expect = 3.3 Identities = 16/57 (28%), Positives = 22/57 (38%), Gaps = 3/57 (5%) Frame = +1 Query: 103 HGAYENEGXCRSLSWQNCAECSNHGSRVLQSLSKTSHXRCRYHLWLER---SPNINE 264 HG CR + WQ V++++ K S C +LE S N NE Sbjct: 31 HGIKRKADECRQVEWQFSKHQKALTGHVIKTIDKPSESACETECYLEANCVSINFNE 87 >SB_19938| Best HMM Match : TolA (HMM E-Value=0.22) Length = 2279 Score = 27.5 bits (58), Expect = 4.4 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 2/55 (3%) Frame = +1 Query: 154 CAECSNHGSRVLQSLSKTSHXRCRYHLWL--ERSPNINEPTAAAIAYGLDKKGTG 312 CA +H S +L SLS+ SH H W+ E S ++ T + L +G G Sbjct: 976 CATEQDHMSAILSSLSQVSHNE---HEWMAAEISEHLKANTVSVTTLQLGLEGLG 1027 >SB_45916| Best HMM Match : Cadherin (HMM E-Value=0) Length = 1774 Score = 27.5 bits (58), Expect = 4.4 Identities = 12/24 (50%), Positives = 17/24 (70%) Frame = -2 Query: 330 DKXISFSSTLFVKTVSNRSSSRFI 259 +K ISF +LF+ VSN S+ R+I Sbjct: 752 NKVISFGPSLFMDKVSNASAGRYI 775 >SB_33718| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 586 Score = 27.1 bits (57), Expect = 5.8 Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 1/43 (2%) Frame = +1 Query: 106 GAYENEGXC-RSLSWQNCAECSNHGSRVLQSLSKTSHXRCRYH 231 G +N C SL W C + +HG +V++ S ++ C +H Sbjct: 537 GKTQNPNECINSLVWARCPKHKHHGPKVVRFASASA--VCHFH 577 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 11,621,380 Number of Sequences: 59808 Number of extensions: 228510 Number of successful extensions: 628 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 582 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 617 length of database: 16,821,457 effective HSP length: 75 effective length of database: 12,335,857 effective search space used: 727815563 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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