Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0509
         (406 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)                      155   1e-38
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)                       146   5e-36
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)                      126   5e-30
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)             109   6e-25
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)              85   2e-17
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)              62   1e-10
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)                 60   9e-10
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)              53   1e-07
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.15 
SB_57752| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   3.3  
SB_19938| Best HMM Match : TolA (HMM E-Value=0.22)                     27   4.4  
SB_45916| Best HMM Match : Cadherin (HMM E-Value=0)                    27   4.4  
SB_33718| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   5.8  

>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
          Length = 1097

 Score =  155 bits (376), Expect = 1e-38
 Identities = 78/134 (58%), Positives = 90/134 (67%)
 Frame = +2

Query: 5   HWPXEVVSNGGKPKIKVAYKGEEKTFFPEEVSXMVLTKMKEXAEAYLGKTVQNAVITVPA 184
           HWP  V+  G +PKI+V +KGE+K+FFPEE+S MVLTKMKE AEAYLG  V +AV+TVPA
Sbjct: 89  HWPFHVIREGERPKIQVEFKGEKKSFFPEEISSMVLTKMKETAEAYLGAKVTDAVVTVPA 148

Query: 185 YFNHSQRQATXDAGTISGLNVLRTSMNXXXXXXXXXXXXXXXENEMXLSLTSAAGTFDVS 364
           YF+ SQRQAT DAGTI+GLNVLR                        L      GTFDVS
Sbjct: 149 YFHDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGVERNVLIYDLGGGTFDVS 208

Query: 365 ILTIEDXIFEVKST 406
           +LTIED IFEVKST
Sbjct: 209 VLTIEDGIFEVKST 222


>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
          Length = 640

 Score =  146 bits (355), Expect = 5e-36
 Identities = 78/136 (57%), Positives = 90/136 (66%), Gaps = 1/136 (0%)
 Frame = +2

Query: 2   KHWPXEVVSNGGKPKIKVAYKGEEKTFFPEEVSXMVLTKMKEXAEAYLGKTVQNAVITVP 181
           K WP +++S+  KPKI+V YKGE KTF  EE+S MVL KMKE AEAYLG+ V +AVITVP
Sbjct: 88  KLWPFKIISDNNKPKIQVEYKGERKTFAAEEISSMVLGKMKETAEAYLGQKVTSAVITVP 147

Query: 182 AYFNHSQRQATXDAGTISGLNVLRTSMNXXXXXXXXXXXXXXXENEMXLSLTSAAGTFDV 361
           AYFN SQRQAT DAGTI+GLNVLR                     +  L      GTFDV
Sbjct: 148 AYFNDSQRQATKDAGTIAGLNVLRVINEPTAAALAYGLDKSLSGEKNVLIFDLGGGTFDV 207

Query: 362 SILTIED-XIFEVKST 406
           SILTI+D  +FEVKST
Sbjct: 208 SILTIDDGSLFEVKST 223


>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
          Length = 1327

 Score =  126 bits (305), Expect = 5e-30
 Identities = 68/135 (50%), Positives = 85/135 (62%)
 Frame = +2

Query: 2    KHWPXEVVSNGGKPKIKVAYKGEEKTFFPEEVSXMVLTKMKEXAEAYLGKTVQNAVITVP 181
            K +P +VV    KP ++V  K E KTF  EE+S MVLTKMKE AEAYLGK V +AV+TVP
Sbjct: 786  KFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISAMVLTKMKETAEAYLGKKVTHAVVTVP 845

Query: 182  AYFNHSQRQATXDAGTISGLNVLRTSMNXXXXXXXXXXXXXXXENEMXLSLTSAAGTFDV 361
            AYFN +QRQAT DAG I+GL V+R  +N                 +  L      GTFDV
Sbjct: 846  AYFNDAQRQATKDAGAIAGLTVMRI-INEPTAAAIAYGMDKKEGEKNILVFDLGGGTFDV 904

Query: 362  SILTIEDXIFEVKST 406
            S+LTI++ +FEV +T
Sbjct: 905  SLLTIDNGVFEVVAT 919


>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 746

 Score =  109 bits (263), Expect = 6e-25
 Identities = 59/105 (56%), Positives = 66/105 (62%)
 Frame = +2

Query: 92  EVSXMVLTKMKEXAEAYLGKTVQNAVITVPAYFNHSQRQATXDAGTISGLNVLRTSMNXX 271
           ++S MVL KMKE AEAYLG  V +AV+TVPAYFN SQRQAT DAG ISGLNVLR      
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAGVISGLNVLRIINEPT 270

Query: 272 XXXXXXXXXXXXXENEMXLSLTSAAGTFDVSILTIEDXIFEVKST 406
                        +    L      GTFDVS+L+IED IFEVKST
Sbjct: 271 AAAIAYGLDKKVGQERNVLIFDLGGGTFDVSVLSIEDGIFEVKST 315



 Score =  107 bits (258), Expect = 3e-24
 Identities = 51/70 (72%), Positives = 57/70 (81%)
 Frame = +2

Query: 17  EVVSNGGKPKIKVAYKGEEKTFFPEEVSXMVLTKMKEXAEAYLGKTVQNAVITVPAYFNH 196
           EVV+  G+PK+KV YKGE KTFF EE+S MVL KMKE AEAYLG  V +AV+TVPAYFN 
Sbjct: 118 EVVNEAGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFND 177

Query: 197 SQRQATXDAG 226
           SQRQAT DAG
Sbjct: 178 SQRQATKDAG 187


>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
          Length = 179

 Score = 85.0 bits (201), Expect = 2e-17
 Identities = 40/68 (58%), Positives = 55/68 (80%)
 Frame = +2

Query: 47  IKVAYKGEEKTFFPEEVSXMVLTKMKEXAEAYLGKTVQNAVITVPAYFNHSQRQATXDAG 226
           I V   GE+++F PE++S +VL ++K  AEA+LG+ V+ AVITVPA+FN +QRQAT DAG
Sbjct: 2   IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAHFNDAQRQATKDAG 61

Query: 227 TISGLNVL 250
           TI+GL+VL
Sbjct: 62  TIAGLDVL 69



 Score = 37.1 bits (82), Expect = 0.005
 Identities = 19/24 (79%), Positives = 19/24 (79%), Gaps = 2/24 (8%)
 Frame = +1

Query: 256 INEPTAAAIAYGLDKK--GTGERN 321
           INEPTAAAIAYGLDK   G  ERN
Sbjct: 96  INEPTAAAIAYGLDKARGGKAERN 119


>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1068

 Score = 62.5 bits (145), Expect = 1e-10
 Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
 Frame = +2

Query: 5   HWPXEVVS-NGGKPKIKVAYKGEEKTFFPEEVSXMVLTKMKEXAEAYLGKTVQNAVITVP 181
           H P +VV        I+V Y G+++ F PE+V  M+ T++K  AE  L   V + VI+VP
Sbjct: 145 HLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVMAMLFTRLKTTAEIALKTKVTDCVISVP 204

Query: 182 AYFNHSQRQATXDAGTISGLNVLR 253
           +Y+   QR+   DA   +GLN LR
Sbjct: 205 SYYTDRQRRCMLDASATAGLNCLR 228


>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
          Length = 437

 Score = 59.7 bits (138), Expect = 9e-10
 Identities = 38/119 (31%), Positives = 55/119 (46%)
 Frame = +2

Query: 35  GKPKIKVAYKGEEKTFFPEEVSXMVLTKMKEXAEAYLGKTVQNAVITVPAYFNHSQRQAT 214
           G     V  KG      PEE+   V+ K++  AE  L  TV  AV++VPA F+  QR AT
Sbjct: 129 GNAGFLVGKKGNFTVITPEEIGGYVIKKLRTMAERNLTTTVTKAVMSVPAEFDIKQRNAT 188

Query: 215 XDAGTISGLNVLRTSMNXXXXXXXXXXXXXXXENEMXLSLTSAAGTFDVSILTIEDXIF 391
             A +++G+ VLR  +N                    + +    GT DVS+L I+  +F
Sbjct: 189 VKAASLAGITVLRV-INEPTAAALAYGLHKKEGVANVMVVDLGGGTLDVSLLNIQGGMF 246


>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1019

 Score = 52.8 bits (121), Expect = 1e-07
 Identities = 25/71 (35%), Positives = 42/71 (59%)
 Frame = +2

Query: 41  PKIKVAYKGEEKTFFPEEVSXMVLTKMKEXAEAYLGKTVQNAVITVPAYFNHSQRQATXD 220
           P +K  Y+  + TF PEE+  M+L   +   E +    +++ V+TVP +FN ++R+A   
Sbjct: 68  PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVPPFFNQAERRALLR 126

Query: 221 AGTISGLNVLR 253
           A  + GLNVL+
Sbjct: 127 AAELVGLNVLQ 137


>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 766

 Score = 32.3 bits (70), Expect = 0.15
 Identities = 13/20 (65%), Positives = 17/20 (85%)
 Frame = +2

Query: 347 GTFDVSILTIEDXIFEVKST 406
           GTFD+SIL I+  +FEVK+T
Sbjct: 10  GTFDISILEIQKGVFEVKAT 29


>SB_57752| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 362

 Score = 27.9 bits (59), Expect = 3.3
 Identities = 16/57 (28%), Positives = 22/57 (38%), Gaps = 3/57 (5%)
 Frame = +1

Query: 103 HGAYENEGXCRSLSWQNCAECSNHGSRVLQSLSKTSHXRCRYHLWLER---SPNINE 264
           HG       CR + WQ           V++++ K S   C    +LE    S N NE
Sbjct: 31  HGIKRKADECRQVEWQFSKHQKALTGHVIKTIDKPSESACETECYLEANCVSINFNE 87


>SB_19938| Best HMM Match : TolA (HMM E-Value=0.22)
          Length = 2279

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
 Frame = +1

Query: 154  CAECSNHGSRVLQSLSKTSHXRCRYHLWL--ERSPNINEPTAAAIAYGLDKKGTG 312
            CA   +H S +L SLS+ SH     H W+  E S ++   T +     L  +G G
Sbjct: 976  CATEQDHMSAILSSLSQVSHNE---HEWMAAEISEHLKANTVSVTTLQLGLEGLG 1027


>SB_45916| Best HMM Match : Cadherin (HMM E-Value=0)
          Length = 1774

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = -2

Query: 330 DKXISFSSTLFVKTVSNRSSSRFI 259
           +K ISF  +LF+  VSN S+ R+I
Sbjct: 752 NKVISFGPSLFMDKVSNASAGRYI 775


>SB_33718| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 586

 Score = 27.1 bits (57), Expect = 5.8
 Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = +1

Query: 106 GAYENEGXC-RSLSWQNCAECSNHGSRVLQSLSKTSHXRCRYH 231
           G  +N   C  SL W  C +  +HG +V++  S ++   C +H
Sbjct: 537 GKTQNPNECINSLVWARCPKHKHHGPKVVRFASASA--VCHFH 577


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,621,380
Number of Sequences: 59808
Number of extensions: 228510
Number of successful extensions: 628
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 617
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 727815563
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)