Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0507
         (678 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   7.0  
DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    21   9.3  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   9.3  

>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 9/35 (25%), Positives = 18/35 (51%)
 Frame = +1

Query: 379 ITHLNLKKH*IDKIKEITQLHSSRFRQKVFFNFIV 483
           +T + LK+H    + EI     S+   + F+ F++
Sbjct: 85  VTMMTLKRHKWSTLFEILLKLESKDLSRTFYGFVI 119


>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 368 Y*NCLVYL*KCTNVGKK 318
           Y NCL+   +CT  GKK
Sbjct: 41  YVNCLLDKGRCTPEGKK 57



 Score = 21.0 bits (42), Expect = 9.3
 Identities = 9/51 (17%), Positives = 20/51 (39%)
 Frame = -1

Query: 354 SISVKVHKCGEKKLHQLTEIIFHFISSHSQLGSSFXXXXXXXXIKKTNYKN 202
           ++S    KC EK    + +++ H I +   +              ++ YK+
Sbjct: 65  ALSTDCAKCNEKVKANVRKVLHHLIDNKPDMWKQLEAKYDPSGEYRSKYKD 115


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 398 FRFKCVITVVY*NCLVYL 345
           F+   V+   Y NCL+YL
Sbjct: 210 FKIIQVVPYCYINCLIYL 227


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,017
Number of Sequences: 336
Number of extensions: 2665
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)