BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0507 (678 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_3066| Best HMM Match : dsrm (HMM E-Value=2.2e-32) 56 3e-08 SB_14707| Best HMM Match : A_deamin (HMM E-Value=0) 50 1e-06 SB_33142| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05 SB_49242| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04 SB_54656| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.010 SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1 SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1 SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1 SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 30 2.0 SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6 SB_7761| Best HMM Match : Drf_FH1 (HMM E-Value=8.2) 29 3.5 SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088) 29 3.5 SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5 SB_29195| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6 SB_36010| Best HMM Match : Remorin_C (HMM E-Value=6.1) 29 4.6 SB_9975| Best HMM Match : 7tm_2 (HMM E-Value=1.9e-38) 29 4.6 >SB_3066| Best HMM Match : dsrm (HMM E-Value=2.2e-32) Length = 429 Score = 55.6 bits (128), Expect = 3e-08 Identities = 23/41 (56%), Positives = 33/41 (80%) Frame = +3 Query: 555 VIAVATGTKCVSGEHMSVRGRAVNDCHAEVAARRCLQRHLY 677 +I++ TGTK +SGE++S +G AVNDCH E+ ARR L++ LY Sbjct: 311 MISIGTGTKFISGEYISDKGYAVNDCHGEIIARRGLRKFLY 351 >SB_14707| Best HMM Match : A_deamin (HMM E-Value=0) Length = 1243 Score = 50.4 bits (115), Expect = 1e-06 Identities = 19/42 (45%), Positives = 30/42 (71%) Frame = +3 Query: 552 QVIAVATGTKCVSGEHMSVRGRAVNDCHAEVAARRCLQRHLY 677 +V+++ G +CV+G+ +S+ G+ VND HAE+ ARR L R Y Sbjct: 904 RVVSLGAGNRCVTGQRLSMEGKVVNDSHAEIIARRSLLRFFY 945 >SB_33142| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 557 Score = 44.8 bits (101), Expect = 7e-05 Identities = 19/40 (47%), Positives = 26/40 (65%) Frame = +3 Query: 555 VIAVATGTKCVSGEHMSVRGRAVNDCHAEVAARRCLQRHL 674 V+++ TG KC+ G+ + + G V D HAEV ARR L R L Sbjct: 213 VVSIGTGNKCIGGDQLRLEGTVVFDSHAEVIARRGLVRFL 252 >SB_49242| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 367 Score = 42.7 bits (96), Expect = 3e-04 Identities = 16/41 (39%), Positives = 27/41 (65%) Frame = +3 Query: 555 VIAVATGTKCVSGEHMSVRGRAVNDCHAEVAARRCLQRHLY 677 +I++ TG+KC+ + +G +ND HAE+ ARR R++Y Sbjct: 62 IISLGTGSKCIGQNKLDPKGGVLNDSHAEIIARRGFVRYVY 102 >SB_54656| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 208 Score = 37.5 bits (83), Expect = 0.010 Identities = 18/34 (52%), Positives = 21/34 (61%) Frame = +3 Query: 555 VIAVATGTKCVSGEHMSVRGRAVNDCHAEVAARR 656 V +ATGTKC+ E + G V D HAEV ARR Sbjct: 55 VACLATGTKCLGHERLDKEGGLVVDQHAEVLARR 88 >SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2317 Score = 30.7 bits (66), Expect = 1.1 Identities = 19/42 (45%), Positives = 22/42 (52%) Frame = -3 Query: 643 TSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518 TS+ Q TA P T +PET P ATA +T TTA P Sbjct: 98 TSSVQETTAAPETT-AAPETTAAPEATAAPETTAPPETTAAP 138 Score = 28.7 bits (61), Expect = 4.6 Identities = 16/42 (38%), Positives = 22/42 (52%) Frame = -3 Query: 643 TSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518 T+A A+P T PET +P TA+ +T TTA+P Sbjct: 224 TTAAPETIAKPETT-APPETTALPKTTAVPETTAAPETTAKP 264 Score = 27.9 bits (59), Expect = 8.0 Identities = 17/42 (40%), Positives = 22/42 (52%) Frame = -3 Query: 643 TSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518 T+ TA P T + +PET VP TA+ +T S T A P Sbjct: 26 TTGAPETTAVPET-IAAPETTTVPGTTAVPGTTAVSETVATP 66 Score = 27.9 bits (59), Expect = 8.0 Identities = 17/42 (40%), Positives = 20/42 (47%) Frame = -3 Query: 643 TSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518 T+A TA P T PET P ATA+ T TT+ P Sbjct: 116 TTAAPEATAAPETT-APPETTAAPEATAVQGITAAPETTSAP 156 >SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 4072 Score = 30.7 bits (66), Expect = 1.1 Identities = 19/42 (45%), Positives = 22/42 (52%) Frame = -3 Query: 643 TSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518 TS+ Q TA P T +PET P ATA +T TTA P Sbjct: 2030 TSSVQETTAAPETT-AAPETTAAPEATAAPETTAPPETTAAP 2070 Score = 28.7 bits (61), Expect = 4.6 Identities = 18/42 (42%), Positives = 22/42 (52%) Frame = -3 Query: 643 TSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518 T+A Q TA P T PET +P TA +T + TTA P Sbjct: 2372 TTAVQEATASPETTS-EPETTALPKTTAAPETTSPTETTAVP 2412 Score = 28.7 bits (61), Expect = 4.6 Identities = 18/42 (42%), Positives = 22/42 (52%) Frame = -3 Query: 643 TSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518 T+A TA P T +PET VP TA + +T TTA P Sbjct: 2613 TTAAPETTAVPETS-AAPETAAVPETTAASETTAAPETTAVP 2653 Score = 27.9 bits (59), Expect = 8.0 Identities = 17/42 (40%), Positives = 20/42 (47%) Frame = -3 Query: 643 TSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518 T+A TA P T PET P ATA+ T TT+ P Sbjct: 2048 TTAAPEATAAPETT-APPETTAAPEATAVQGITAAPETTSAP 2088 Score = 27.9 bits (59), Expect = 8.0 Identities = 18/42 (42%), Positives = 22/42 (52%) Frame = -3 Query: 643 TSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518 T+A TA P+T +PET VP TA +T TTA P Sbjct: 2805 TTAAPETTAVPKTT-AAPETTAVPKTTAAPETTSVPKTTAAP 2845 >SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 3297 Score = 30.7 bits (66), Expect = 1.1 Identities = 19/42 (45%), Positives = 22/42 (52%) Frame = -3 Query: 643 TSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518 TS+ Q TA P T +PET P ATA +T TTA P Sbjct: 3185 TSSVQETTAAPETT-AAPETTAAPEATAAPETTAPPETTAAP 3225 Score = 28.7 bits (61), Expect = 4.6 Identities = 18/42 (42%), Positives = 22/42 (52%) Frame = -3 Query: 643 TSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518 T+A Q TA P T PET +P TA +T + TTA P Sbjct: 2915 TTAVQEATASPETTS-EPETTALPKTTAAPETTSPTETTAVP 2955 Score = 27.9 bits (59), Expect = 8.0 Identities = 17/42 (40%), Positives = 20/42 (47%) Frame = -3 Query: 643 TSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518 T+A TA P T PET P ATA+ T TT+ P Sbjct: 3203 TTAAPEATAAPETT-APPETTAAPEATAVQGITAAPETTSAP 3243 >SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) Length = 3445 Score = 29.9 bits (64), Expect = 2.0 Identities = 17/42 (40%), Positives = 21/42 (50%) Frame = -3 Query: 643 TSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518 TS TA P T +PET +VP T+ +T TTA P Sbjct: 1312 TSLAPETTAAPETS-AAPETTMVPETTSAPSTTMAPETTAAP 1352 Score = 29.1 bits (62), Expect = 3.5 Identities = 17/44 (38%), Positives = 23/44 (52%) Frame = -3 Query: 649 AATSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518 A T+A T P T +P+T LVP T + +T + TTA P Sbjct: 1574 AETTASAETTVAPETT-AAPDTTLVPDTTLVPDTTVAAETTAAP 1616 Score = 29.1 bits (62), Expect = 3.5 Identities = 16/42 (38%), Positives = 21/42 (50%) Frame = -3 Query: 643 TSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518 T+ TA P T +PET +VP T+ +T TTA P Sbjct: 2249 TTVVPETTAAPETS-ATPETTMVPETTSAPSTTMAPETTATP 2289 Score = 29.1 bits (62), Expect = 3.5 Identities = 16/44 (36%), Positives = 22/44 (50%) Frame = -3 Query: 649 AATSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518 A T+A TA P T +P+T +VP T+ +T TT P Sbjct: 2940 AETTAAPETTAAPETS-AAPDTTMVPQTTSAPATTMAPETTLAP 2982 Score = 28.7 bits (61), Expect = 4.6 Identities = 16/35 (45%), Positives = 19/35 (54%) Frame = -3 Query: 622 TARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518 TA P T M +PET + P AT +T TTA P Sbjct: 528 TAAPETTM-APETTIAPEATVAPETTMAPETTAAP 561 >SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1211 Score = 29.5 bits (63), Expect = 2.6 Identities = 18/42 (42%), Positives = 21/42 (50%) Frame = -3 Query: 643 TSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518 T+A TA P T +PET P TA +T S TTA P Sbjct: 681 TTAAPETTAAPETT-AAPETTAAPETTAAPETTSASETTAAP 721 Score = 29.1 bits (62), Expect = 3.5 Identities = 18/42 (42%), Positives = 23/42 (54%) Frame = -3 Query: 643 TSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518 T+A TA P+T +PET P TA + +T S TTA P Sbjct: 735 TTAVLETTAAPKTT-AAPETTAEPETTAASETTVASETTAAP 775 Score = 27.9 bits (59), Expect = 8.0 Identities = 18/42 (42%), Positives = 21/42 (50%) Frame = -3 Query: 643 TSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518 T+A TA P T +PET P TA T +T TTA P Sbjct: 915 TTAAPDTTAVPETT-AAPETTATPDTTAATETTAAPETTAVP 955 >SB_7761| Best HMM Match : Drf_FH1 (HMM E-Value=8.2) Length = 233 Score = 29.1 bits (62), Expect = 3.5 Identities = 17/44 (38%), Positives = 23/44 (52%) Frame = -3 Query: 649 AATSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518 A T+A T P T +P+T LVP T + +T + TTA P Sbjct: 128 AETTASAETTVAPETT-AAPDTTLVPDTTLVPDTTVAAETTAAP 170 >SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088) Length = 665 Score = 29.1 bits (62), Expect = 3.5 Identities = 16/42 (38%), Positives = 21/42 (50%) Frame = -3 Query: 643 TSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518 T+ TA P T +PET +VP T+ +T TTA P Sbjct: 436 TTVIPETTAAPETS-ATPETTMVPETTSAPSTTMAPETTATP 476 >SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 5659 Score = 29.1 bits (62), Expect = 3.5 Identities = 15/35 (42%), Positives = 20/35 (57%) Frame = -3 Query: 622 TARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518 TA P T M +P+T PV T++ +T TTA P Sbjct: 974 TAAPETTM-APDTTAAPVTTSVPETTAAPETTAAP 1007 Score = 28.7 bits (61), Expect = 4.6 Identities = 16/35 (45%), Positives = 19/35 (54%) Frame = -3 Query: 622 TARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518 T P T M +PE+ + PV T ST SVTT P Sbjct: 2138 TLEPETTM-APESTVAPVTTMAPDSTVASVTTMAP 2171 Score = 28.3 bits (60), Expect = 6.0 Identities = 16/42 (38%), Positives = 21/42 (50%) Frame = -3 Query: 643 TSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518 T+ +T P T + +PET L P TA +T TTA P Sbjct: 1165 TTTALEITVEPETSV-APETSLAPETTAAPETTAAPETTAGP 1205 Score = 27.9 bits (59), Expect = 8.0 Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 5/47 (10%) Frame = -3 Query: 643 TSAWQSLTARPRTDMC-----SPETHLVPVATAITCSTRGSVTTARP 518 TSA ++ P T M +PET + P TA ST VTT P Sbjct: 4614 TSAMETTAEAPDTTMAPVSTVAPETTMAPETTAAPVSTVALVTTKAP 4660 >SB_29195| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 539 Score = 28.7 bits (61), Expect = 4.6 Identities = 16/51 (31%), Positives = 22/51 (43%) Frame = -3 Query: 673 RWRWRQRRAATSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTAR 521 R +WRQ+ + +L R CS P T+ S+RGSV R Sbjct: 326 RLKWRQKFIVVNVESALPLITRPSHCSSRVSPAPSNTSRRSSSRGSVPRPR 376 >SB_36010| Best HMM Match : Remorin_C (HMM E-Value=6.1) Length = 183 Score = 28.7 bits (61), Expect = 4.6 Identities = 16/51 (31%), Positives = 22/51 (43%) Frame = -3 Query: 673 RWRWRQRRAATSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTAR 521 R +WRQ+ + +L R CS P T+ S+RGSV R Sbjct: 66 RLKWRQKFIVVNVESALPLITRPSHCSSRVSPAPSNTSRRSSSRGSVPRPR 116 >SB_9975| Best HMM Match : 7tm_2 (HMM E-Value=1.9e-38) Length = 1101 Score = 28.7 bits (61), Expect = 4.6 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Frame = +3 Query: 483 VCLLVPPRGPHGGRAV-VTDPRVLQVIAVATGTKCVSGEHMSVRGRAVN 626 +CL V GP GGR + VT +L + + + SG + RG ++N Sbjct: 388 LCLAVTLCGPEGGRLIEVTKGNLLFLCSSISSQSLFSGHSLRTRGWSLN 436 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,392,819 Number of Sequences: 59808 Number of extensions: 317108 Number of successful extensions: 1540 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 1245 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1498 length of database: 16,821,457 effective HSP length: 80 effective length of database: 12,036,817 effective search space used: 1745338465 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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