Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0507
(678 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_3066| Best HMM Match : dsrm (HMM E-Value=2.2e-32) 56 3e-08
SB_14707| Best HMM Match : A_deamin (HMM E-Value=0) 50 1e-06
SB_33142| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_49242| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_54656| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.010
SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 30 2.0
SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_7761| Best HMM Match : Drf_FH1 (HMM E-Value=8.2) 29 3.5
SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088) 29 3.5
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_29195| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_36010| Best HMM Match : Remorin_C (HMM E-Value=6.1) 29 4.6
SB_9975| Best HMM Match : 7tm_2 (HMM E-Value=1.9e-38) 29 4.6
>SB_3066| Best HMM Match : dsrm (HMM E-Value=2.2e-32)
Length = 429
Score = 55.6 bits (128), Expect = 3e-08
Identities = 23/41 (56%), Positives = 33/41 (80%)
Frame = +3
Query: 555 VIAVATGTKCVSGEHMSVRGRAVNDCHAEVAARRCLQRHLY 677
+I++ TGTK +SGE++S +G AVNDCH E+ ARR L++ LY
Sbjct: 311 MISIGTGTKFISGEYISDKGYAVNDCHGEIIARRGLRKFLY 351
>SB_14707| Best HMM Match : A_deamin (HMM E-Value=0)
Length = 1243
Score = 50.4 bits (115), Expect = 1e-06
Identities = 19/42 (45%), Positives = 30/42 (71%)
Frame = +3
Query: 552 QVIAVATGTKCVSGEHMSVRGRAVNDCHAEVAARRCLQRHLY 677
+V+++ G +CV+G+ +S+ G+ VND HAE+ ARR L R Y
Sbjct: 904 RVVSLGAGNRCVTGQRLSMEGKVVNDSHAEIIARRSLLRFFY 945
>SB_33142| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 557
Score = 44.8 bits (101), Expect = 7e-05
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = +3
Query: 555 VIAVATGTKCVSGEHMSVRGRAVNDCHAEVAARRCLQRHL 674
V+++ TG KC+ G+ + + G V D HAEV ARR L R L
Sbjct: 213 VVSIGTGNKCIGGDQLRLEGTVVFDSHAEVIARRGLVRFL 252
>SB_49242| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 367
Score = 42.7 bits (96), Expect = 3e-04
Identities = 16/41 (39%), Positives = 27/41 (65%)
Frame = +3
Query: 555 VIAVATGTKCVSGEHMSVRGRAVNDCHAEVAARRCLQRHLY 677
+I++ TG+KC+ + +G +ND HAE+ ARR R++Y
Sbjct: 62 IISLGTGSKCIGQNKLDPKGGVLNDSHAEIIARRGFVRYVY 102
>SB_54656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 37.5 bits (83), Expect = 0.010
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = +3
Query: 555 VIAVATGTKCVSGEHMSVRGRAVNDCHAEVAARR 656
V +ATGTKC+ E + G V D HAEV ARR
Sbjct: 55 VACLATGTKCLGHERLDKEGGLVVDQHAEVLARR 88
>SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2317
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = -3
Query: 643 TSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518
TS+ Q TA P T +PET P ATA +T TTA P
Sbjct: 98 TSSVQETTAAPETT-AAPETTAAPEATAAPETTAPPETTAAP 138
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -3
Query: 643 TSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518
T+A A+P T PET +P TA+ +T TTA+P
Sbjct: 224 TTAAPETIAKPETT-APPETTALPKTTAVPETTAAPETTAKP 264
Score = 27.9 bits (59), Expect = 8.0
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = -3
Query: 643 TSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518
T+ TA P T + +PET VP TA+ +T S T A P
Sbjct: 26 TTGAPETTAVPET-IAAPETTTVPGTTAVPGTTAVSETVATP 66
Score = 27.9 bits (59), Expect = 8.0
Identities = 17/42 (40%), Positives = 20/42 (47%)
Frame = -3
Query: 643 TSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518
T+A TA P T PET P ATA+ T TT+ P
Sbjct: 116 TTAAPEATAAPETT-APPETTAAPEATAVQGITAAPETTSAP 156
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = -3
Query: 643 TSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518
TS+ Q TA P T +PET P ATA +T TTA P
Sbjct: 2030 TSSVQETTAAPETT-AAPETTAAPEATAAPETTAPPETTAAP 2070
Score = 28.7 bits (61), Expect = 4.6
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = -3
Query: 643 TSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518
T+A Q TA P T PET +P TA +T + TTA P
Sbjct: 2372 TTAVQEATASPETTS-EPETTALPKTTAAPETTSPTETTAVP 2412
Score = 28.7 bits (61), Expect = 4.6
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = -3
Query: 643 TSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518
T+A TA P T +PET VP TA + +T TTA P
Sbjct: 2613 TTAAPETTAVPETS-AAPETAAVPETTAASETTAAPETTAVP 2653
Score = 27.9 bits (59), Expect = 8.0
Identities = 17/42 (40%), Positives = 20/42 (47%)
Frame = -3
Query: 643 TSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518
T+A TA P T PET P ATA+ T TT+ P
Sbjct: 2048 TTAAPEATAAPETT-APPETTAAPEATAVQGITAAPETTSAP 2088
Score = 27.9 bits (59), Expect = 8.0
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = -3
Query: 643 TSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518
T+A TA P+T +PET VP TA +T TTA P
Sbjct: 2805 TTAAPETTAVPKTT-AAPETTAVPKTTAAPETTSVPKTTAAP 2845
>SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3297
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = -3
Query: 643 TSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518
TS+ Q TA P T +PET P ATA +T TTA P
Sbjct: 3185 TSSVQETTAAPETT-AAPETTAAPEATAAPETTAPPETTAAP 3225
Score = 28.7 bits (61), Expect = 4.6
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = -3
Query: 643 TSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518
T+A Q TA P T PET +P TA +T + TTA P
Sbjct: 2915 TTAVQEATASPETTS-EPETTALPKTTAAPETTSPTETTAVP 2955
Score = 27.9 bits (59), Expect = 8.0
Identities = 17/42 (40%), Positives = 20/42 (47%)
Frame = -3
Query: 643 TSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518
T+A TA P T PET P ATA+ T TT+ P
Sbjct: 3203 TTAAPEATAAPETT-APPETTAAPEATAVQGITAAPETTSAP 3243
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = -3
Query: 643 TSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518
TS TA P T +PET +VP T+ +T TTA P
Sbjct: 1312 TSLAPETTAAPETS-AAPETTMVPETTSAPSTTMAPETTAAP 1352
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = -3
Query: 649 AATSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518
A T+A T P T +P+T LVP T + +T + TTA P
Sbjct: 1574 AETTASAETTVAPETT-AAPDTTLVPDTTLVPDTTVAAETTAAP 1616
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -3
Query: 643 TSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518
T+ TA P T +PET +VP T+ +T TTA P
Sbjct: 2249 TTVVPETTAAPETS-ATPETTMVPETTSAPSTTMAPETTATP 2289
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -3
Query: 649 AATSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518
A T+A TA P T +P+T +VP T+ +T TT P
Sbjct: 2940 AETTAAPETTAAPETS-AAPDTTMVPQTTSAPATTMAPETTLAP 2982
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = -3
Query: 622 TARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518
TA P T M +PET + P AT +T TTA P
Sbjct: 528 TAAPETTM-APETTIAPEATVAPETTMAPETTAAP 561
>SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1211
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/42 (42%), Positives = 21/42 (50%)
Frame = -3
Query: 643 TSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518
T+A TA P T +PET P TA +T S TTA P
Sbjct: 681 TTAAPETTAAPETT-AAPETTAAPETTAAPETTSASETTAAP 721
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = -3
Query: 643 TSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518
T+A TA P+T +PET P TA + +T S TTA P
Sbjct: 735 TTAVLETTAAPKTT-AAPETTAEPETTAASETTVASETTAAP 775
Score = 27.9 bits (59), Expect = 8.0
Identities = 18/42 (42%), Positives = 21/42 (50%)
Frame = -3
Query: 643 TSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518
T+A TA P T +PET P TA T +T TTA P
Sbjct: 915 TTAAPDTTAVPETT-AAPETTATPDTTAATETTAAPETTAVP 955
>SB_7761| Best HMM Match : Drf_FH1 (HMM E-Value=8.2)
Length = 233
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = -3
Query: 649 AATSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518
A T+A T P T +P+T LVP T + +T + TTA P
Sbjct: 128 AETTASAETTVAPETT-AAPDTTLVPDTTLVPDTTVAAETTAAP 170
>SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088)
Length = 665
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -3
Query: 643 TSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518
T+ TA P T +PET +VP T+ +T TTA P
Sbjct: 436 TTVIPETTAAPETS-ATPETTMVPETTSAPSTTMAPETTATP 476
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = -3
Query: 622 TARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518
TA P T M +P+T PV T++ +T TTA P
Sbjct: 974 TAAPETTM-APDTTAAPVTTSVPETTAAPETTAAP 1007
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = -3
Query: 622 TARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518
T P T M +PE+ + PV T ST SVTT P
Sbjct: 2138 TLEPETTM-APESTVAPVTTMAPDSTVASVTTMAP 2171
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -3
Query: 643 TSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518
T+ +T P T + +PET L P TA +T TTA P
Sbjct: 1165 TTTALEITVEPETSV-APETSLAPETTAAPETTAAPETTAGP 1205
Score = 27.9 bits (59), Expect = 8.0
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
Frame = -3
Query: 643 TSAWQSLTARPRTDMC-----SPETHLVPVATAITCSTRGSVTTARP 518
TSA ++ P T M +PET + P TA ST VTT P
Sbjct: 4614 TSAMETTAEAPDTTMAPVSTVAPETTMAPETTAAPVSTVALVTTKAP 4660
>SB_29195| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = -3
Query: 673 RWRWRQRRAATSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTAR 521
R +WRQ+ + +L R CS P T+ S+RGSV R
Sbjct: 326 RLKWRQKFIVVNVESALPLITRPSHCSSRVSPAPSNTSRRSSSRGSVPRPR 376
>SB_36010| Best HMM Match : Remorin_C (HMM E-Value=6.1)
Length = 183
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = -3
Query: 673 RWRWRQRRAATSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTAR 521
R +WRQ+ + +L R CS P T+ S+RGSV R
Sbjct: 66 RLKWRQKFIVVNVESALPLITRPSHCSSRVSPAPSNTSRRSSSRGSVPRPR 116
>SB_9975| Best HMM Match : 7tm_2 (HMM E-Value=1.9e-38)
Length = 1101
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +3
Query: 483 VCLLVPPRGPHGGRAV-VTDPRVLQVIAVATGTKCVSGEHMSVRGRAVN 626
+CL V GP GGR + VT +L + + + SG + RG ++N
Sbjct: 388 LCLAVTLCGPEGGRLIEVTKGNLLFLCSSISSQSLFSGHSLRTRGWSLN 436
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,392,819
Number of Sequences: 59808
Number of extensions: 317108
Number of successful extensions: 1540
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1498
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1745338465
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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