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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0507
         (678 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_3066| Best HMM Match : dsrm (HMM E-Value=2.2e-32)                   56   3e-08
SB_14707| Best HMM Match : A_deamin (HMM E-Value=0)                    50   1e-06
SB_33142| Best HMM Match : No HMM Matches (HMM E-Value=.)              45   7e-05
SB_49242| Best HMM Match : No HMM Matches (HMM E-Value=.)              43   3e-04
SB_54656| Best HMM Match : No HMM Matches (HMM E-Value=.)              38   0.010
SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.1  
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.1  
SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.)               31   1.1  
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)               30   2.0  
SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.6  
SB_7761| Best HMM Match : Drf_FH1 (HMM E-Value=8.2)                    29   3.5  
SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088)                 29   3.5  
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.5  
SB_29195| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.6  
SB_36010| Best HMM Match : Remorin_C (HMM E-Value=6.1)                 29   4.6  
SB_9975| Best HMM Match : 7tm_2 (HMM E-Value=1.9e-38)                  29   4.6  

>SB_3066| Best HMM Match : dsrm (HMM E-Value=2.2e-32)
          Length = 429

 Score = 55.6 bits (128), Expect = 3e-08
 Identities = 23/41 (56%), Positives = 33/41 (80%)
 Frame = +3

Query: 555 VIAVATGTKCVSGEHMSVRGRAVNDCHAEVAARRCLQRHLY 677
           +I++ TGTK +SGE++S +G AVNDCH E+ ARR L++ LY
Sbjct: 311 MISIGTGTKFISGEYISDKGYAVNDCHGEIIARRGLRKFLY 351


>SB_14707| Best HMM Match : A_deamin (HMM E-Value=0)
          Length = 1243

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 19/42 (45%), Positives = 30/42 (71%)
 Frame = +3

Query: 552  QVIAVATGTKCVSGEHMSVRGRAVNDCHAEVAARRCLQRHLY 677
            +V+++  G +CV+G+ +S+ G+ VND HAE+ ARR L R  Y
Sbjct: 904  RVVSLGAGNRCVTGQRLSMEGKVVNDSHAEIIARRSLLRFFY 945


>SB_33142| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 557

 Score = 44.8 bits (101), Expect = 7e-05
 Identities = 19/40 (47%), Positives = 26/40 (65%)
 Frame = +3

Query: 555 VIAVATGTKCVSGEHMSVRGRAVNDCHAEVAARRCLQRHL 674
           V+++ TG KC+ G+ + + G  V D HAEV ARR L R L
Sbjct: 213 VVSIGTGNKCIGGDQLRLEGTVVFDSHAEVIARRGLVRFL 252


>SB_49242| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 367

 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 16/41 (39%), Positives = 27/41 (65%)
 Frame = +3

Query: 555 VIAVATGTKCVSGEHMSVRGRAVNDCHAEVAARRCLQRHLY 677
           +I++ TG+KC+    +  +G  +ND HAE+ ARR   R++Y
Sbjct: 62  IISLGTGSKCIGQNKLDPKGGVLNDSHAEIIARRGFVRYVY 102


>SB_54656| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 208

 Score = 37.5 bits (83), Expect = 0.010
 Identities = 18/34 (52%), Positives = 21/34 (61%)
 Frame = +3

Query: 555 VIAVATGTKCVSGEHMSVRGRAVNDCHAEVAARR 656
           V  +ATGTKC+  E +   G  V D HAEV ARR
Sbjct: 55  VACLATGTKCLGHERLDKEGGLVVDQHAEVLARR 88


>SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2317

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 19/42 (45%), Positives = 22/42 (52%)
 Frame = -3

Query: 643 TSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518
           TS+ Q  TA P T   +PET   P ATA   +T    TTA P
Sbjct: 98  TSSVQETTAAPETT-AAPETTAAPEATAAPETTAPPETTAAP 138



 Score = 28.7 bits (61), Expect = 4.6
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = -3

Query: 643 TSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518
           T+A     A+P T    PET  +P  TA+  +T    TTA+P
Sbjct: 224 TTAAPETIAKPETT-APPETTALPKTTAVPETTAAPETTAKP 264



 Score = 27.9 bits (59), Expect = 8.0
 Identities = 17/42 (40%), Positives = 22/42 (52%)
 Frame = -3

Query: 643 TSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518
           T+     TA P T + +PET  VP  TA+  +T  S T A P
Sbjct: 26  TTGAPETTAVPET-IAAPETTTVPGTTAVPGTTAVSETVATP 66



 Score = 27.9 bits (59), Expect = 8.0
 Identities = 17/42 (40%), Positives = 20/42 (47%)
 Frame = -3

Query: 643 TSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518
           T+A    TA P T    PET   P ATA+   T    TT+ P
Sbjct: 116 TTAAPEATAAPETT-APPETTAAPEATAVQGITAAPETTSAP 156


>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 4072

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 19/42 (45%), Positives = 22/42 (52%)
 Frame = -3

Query: 643  TSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518
            TS+ Q  TA P T   +PET   P ATA   +T    TTA P
Sbjct: 2030 TSSVQETTAAPETT-AAPETTAAPEATAAPETTAPPETTAAP 2070



 Score = 28.7 bits (61), Expect = 4.6
 Identities = 18/42 (42%), Positives = 22/42 (52%)
 Frame = -3

Query: 643  TSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518
            T+A Q  TA P T    PET  +P  TA   +T  + TTA P
Sbjct: 2372 TTAVQEATASPETTS-EPETTALPKTTAAPETTSPTETTAVP 2412



 Score = 28.7 bits (61), Expect = 4.6
 Identities = 18/42 (42%), Positives = 22/42 (52%)
 Frame = -3

Query: 643  TSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518
            T+A    TA P T   +PET  VP  TA + +T    TTA P
Sbjct: 2613 TTAAPETTAVPETS-AAPETAAVPETTAASETTAAPETTAVP 2653



 Score = 27.9 bits (59), Expect = 8.0
 Identities = 17/42 (40%), Positives = 20/42 (47%)
 Frame = -3

Query: 643  TSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518
            T+A    TA P T    PET   P ATA+   T    TT+ P
Sbjct: 2048 TTAAPEATAAPETT-APPETTAAPEATAVQGITAAPETTSAP 2088



 Score = 27.9 bits (59), Expect = 8.0
 Identities = 18/42 (42%), Positives = 22/42 (52%)
 Frame = -3

Query: 643  TSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518
            T+A    TA P+T   +PET  VP  TA   +T    TTA P
Sbjct: 2805 TTAAPETTAVPKTT-AAPETTAVPKTTAAPETTSVPKTTAAP 2845


>SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3297

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 19/42 (45%), Positives = 22/42 (52%)
 Frame = -3

Query: 643  TSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518
            TS+ Q  TA P T   +PET   P ATA   +T    TTA P
Sbjct: 3185 TSSVQETTAAPETT-AAPETTAAPEATAAPETTAPPETTAAP 3225



 Score = 28.7 bits (61), Expect = 4.6
 Identities = 18/42 (42%), Positives = 22/42 (52%)
 Frame = -3

Query: 643  TSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518
            T+A Q  TA P T    PET  +P  TA   +T  + TTA P
Sbjct: 2915 TTAVQEATASPETTS-EPETTALPKTTAAPETTSPTETTAVP 2955



 Score = 27.9 bits (59), Expect = 8.0
 Identities = 17/42 (40%), Positives = 20/42 (47%)
 Frame = -3

Query: 643  TSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518
            T+A    TA P T    PET   P ATA+   T    TT+ P
Sbjct: 3203 TTAAPEATAAPETT-APPETTAAPEATAVQGITAAPETTSAP 3243


>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
          Length = 3445

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 17/42 (40%), Positives = 21/42 (50%)
 Frame = -3

Query: 643  TSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518
            TS     TA P T   +PET +VP  T+   +T    TTA P
Sbjct: 1312 TSLAPETTAAPETS-AAPETTMVPETTSAPSTTMAPETTAAP 1352



 Score = 29.1 bits (62), Expect = 3.5
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = -3

Query: 649  AATSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518
            A T+A    T  P T   +P+T LVP  T +  +T  + TTA P
Sbjct: 1574 AETTASAETTVAPETT-AAPDTTLVPDTTLVPDTTVAAETTAAP 1616



 Score = 29.1 bits (62), Expect = 3.5
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = -3

Query: 643  TSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518
            T+     TA P T   +PET +VP  T+   +T    TTA P
Sbjct: 2249 TTVVPETTAAPETS-ATPETTMVPETTSAPSTTMAPETTATP 2289



 Score = 29.1 bits (62), Expect = 3.5
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = -3

Query: 649  AATSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518
            A T+A    TA P T   +P+T +VP  T+   +T    TT  P
Sbjct: 2940 AETTAAPETTAAPETS-AAPDTTMVPQTTSAPATTMAPETTLAP 2982



 Score = 28.7 bits (61), Expect = 4.6
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = -3

Query: 622 TARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518
           TA P T M +PET + P AT    +T    TTA P
Sbjct: 528 TAAPETTM-APETTIAPEATVAPETTMAPETTAAP 561


>SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1211

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 18/42 (42%), Positives = 21/42 (50%)
 Frame = -3

Query: 643 TSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518
           T+A    TA P T   +PET   P  TA   +T  S TTA P
Sbjct: 681 TTAAPETTAAPETT-AAPETTAAPETTAAPETTSASETTAAP 721



 Score = 29.1 bits (62), Expect = 3.5
 Identities = 18/42 (42%), Positives = 23/42 (54%)
 Frame = -3

Query: 643 TSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518
           T+A    TA P+T   +PET   P  TA + +T  S TTA P
Sbjct: 735 TTAVLETTAAPKTT-AAPETTAEPETTAASETTVASETTAAP 775



 Score = 27.9 bits (59), Expect = 8.0
 Identities = 18/42 (42%), Positives = 21/42 (50%)
 Frame = -3

Query: 643  TSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518
            T+A    TA P T   +PET   P  TA T +T    TTA P
Sbjct: 915  TTAAPDTTAVPETT-AAPETTATPDTTAATETTAAPETTAVP 955


>SB_7761| Best HMM Match : Drf_FH1 (HMM E-Value=8.2)
          Length = 233

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = -3

Query: 649 AATSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518
           A T+A    T  P T   +P+T LVP  T +  +T  + TTA P
Sbjct: 128 AETTASAETTVAPETT-AAPDTTLVPDTTLVPDTTVAAETTAAP 170


>SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088)
          Length = 665

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = -3

Query: 643 TSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518
           T+     TA P T   +PET +VP  T+   +T    TTA P
Sbjct: 436 TTVIPETTAAPETS-ATPETTMVPETTSAPSTTMAPETTATP 476


>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 5659

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = -3

Query: 622  TARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518
            TA P T M +P+T   PV T++  +T    TTA P
Sbjct: 974  TAAPETTM-APDTTAAPVTTSVPETTAAPETTAAP 1007



 Score = 28.7 bits (61), Expect = 4.6
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = -3

Query: 622  TARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518
            T  P T M +PE+ + PV T    ST  SVTT  P
Sbjct: 2138 TLEPETTM-APESTVAPVTTMAPDSTVASVTTMAP 2171



 Score = 28.3 bits (60), Expect = 6.0
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = -3

Query: 643  TSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTARP 518
            T+    +T  P T + +PET L P  TA   +T    TTA P
Sbjct: 1165 TTTALEITVEPETSV-APETSLAPETTAAPETTAAPETTAGP 1205



 Score = 27.9 bits (59), Expect = 8.0
 Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
 Frame = -3

Query: 643  TSAWQSLTARPRTDMC-----SPETHLVPVATAITCSTRGSVTTARP 518
            TSA ++    P T M      +PET + P  TA   ST   VTT  P
Sbjct: 4614 TSAMETTAEAPDTTMAPVSTVAPETTMAPETTAAPVSTVALVTTKAP 4660


>SB_29195| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 539

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 16/51 (31%), Positives = 22/51 (43%)
 Frame = -3

Query: 673 RWRWRQRRAATSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTAR 521
           R +WRQ+    +   +L    R   CS      P  T+   S+RGSV   R
Sbjct: 326 RLKWRQKFIVVNVESALPLITRPSHCSSRVSPAPSNTSRRSSSRGSVPRPR 376


>SB_36010| Best HMM Match : Remorin_C (HMM E-Value=6.1)
          Length = 183

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 16/51 (31%), Positives = 22/51 (43%)
 Frame = -3

Query: 673 RWRWRQRRAATSAWQSLTARPRTDMCSPETHLVPVATAITCSTRGSVTTAR 521
           R +WRQ+    +   +L    R   CS      P  T+   S+RGSV   R
Sbjct: 66  RLKWRQKFIVVNVESALPLITRPSHCSSRVSPAPSNTSRRSSSRGSVPRPR 116


>SB_9975| Best HMM Match : 7tm_2 (HMM E-Value=1.9e-38)
          Length = 1101

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = +3

Query: 483 VCLLVPPRGPHGGRAV-VTDPRVLQVIAVATGTKCVSGEHMSVRGRAVN 626
           +CL V   GP GGR + VT   +L + +  +     SG  +  RG ++N
Sbjct: 388 LCLAVTLCGPEGGRLIEVTKGNLLFLCSSISSQSLFSGHSLRTRGWSLN 436


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,392,819
Number of Sequences: 59808
Number of extensions: 317108
Number of successful extensions: 1540
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1498
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1745338465
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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