Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0507
         (678 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    71   1e-14
AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           23   3.5  
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           23   3.5  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   6.2  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   6.2  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 70.5 bits (165), Expect = 1e-14
 Identities = 30/42 (71%), Positives = 35/42 (83%)
 Frame = +3

Query: 552 QVIAVATGTKCVSGEHMSVRGRAVNDCHAEVAARRCLQRHLY 677
           ++I V TGTKCVSGEH+SV G A+NDCHAEV ARRCL  +LY
Sbjct: 291 ELICVTTGTKCVSGEHLSVSGGALNDCHAEVVARRCLCEYLY 332



 Score = 33.9 bits (74), Expect = 0.001
 Identities = 15/30 (50%), Positives = 22/30 (73%)
 Frame = +2

Query: 2   KFSEMMKNDVIHSKRKVLAGIVMTTDSKVD 91
           KFSE++++   H++RKVLAGIV T  S  +
Sbjct: 262 KFSELIQSKPQHARRKVLAGIVQTKGSDAE 291


>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -2

Query: 632 AVVDGPAAHRHVLAGDALGARRHRYHLQHSRVSDDSPPP 516
           A+V   A++      + LG RRHRY+ Q    + +  PP
Sbjct: 35  AIVSNSASNSVHGHREGLG-RRHRYNFQLKPYNPEHKPP 72


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -2

Query: 632 AVVDGPAAHRHVLAGDALGARRHRYHLQHSRVSDDSPPP 516
           A+V   A++      + LG RRHRY+ Q    + +  PP
Sbjct: 36  AIVSNSASNSVHGHREGLG-RRHRYNFQLKPYNPEHKPP 73


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = -2

Query: 671 VALEAAPGRHLRVAVVDGPAAHRHVLAGDALG 576
           V +  +P     V  +D P   RH+  G A+G
Sbjct: 616 VLVVVSPFDDSNVVQIDSPVWGRHIYDGRAMG 647


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = -2

Query: 671 VALEAAPGRHLRVAVVDGPAAHRHVLAGDALG 576
           V +  +P     V  +D P   RH+  G A+G
Sbjct: 616 VLVVVSPFDDSNVVQIDSPVWGRHIYDGRAMG 647


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,785
Number of Sequences: 438
Number of extensions: 2950
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20586735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)