BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0507 (678 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g01760.1 68414.m00095 adenosine-deaminase family / editase fa... 56 2e-08 At5g35670.1 68418.m04261 calmodulin-binding family protein conta... 28 6.5 At3g45410.1 68416.m04902 lectin protein kinase family protein co... 27 8.6 >At1g01760.1 68414.m00095 adenosine-deaminase family / editase family similar to double-stranded RNA-specific editase GB:AAF69673 GI:7770275 from [Danio rerio] Length = 325 Score = 56.0 bits (129), Expect = 2e-08 Identities = 27/42 (64%), Positives = 30/42 (71%) Frame = +3 Query: 552 QVIAVATGTKCVSGEHMSVRGRAVNDCHAEVAARRCLQRHLY 677 +VIA+ TGTKCVSG +S RG VND HAEV ARR L R Y Sbjct: 47 KVIALGTGTKCVSGSLLSPRGDIVNDSHAEVVARRALIRFFY 88 >At5g35670.1 68418.m04261 calmodulin-binding family protein contains IQ calmodulin-binding motif, Pfam:PF00612 Length = 442 Score = 27.9 bits (59), Expect = 6.5 Identities = 11/32 (34%), Positives = 16/32 (50%) Frame = -3 Query: 670 WRWRQRRAATSAWQSLTARPRTDMCSPETHLV 575 W W +R AT S+ PRTD+ + L+ Sbjct: 303 WSWLERWMATRVPDSIPIEPRTDVATKNQSLI 334 >At3g45410.1 68416.m04902 lectin protein kinase family protein contains Pfam profiles: PF00069 protein kinase domain, PF00138 legume lectins alpha domain, PF00139 legume lectins beta domain Length = 664 Score = 27.5 bits (58), Expect = 8.6 Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 3/31 (9%) Frame = +3 Query: 450 FSPKSLF*F--HCVCLLVPPR-GPHGGRAVV 533 F P S F H VC LVPP+ G GG +V Sbjct: 72 FDPSSSLSFYTHFVCALVPPKLGADGGHGIV 102 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 11,936,557 Number of Sequences: 28952 Number of extensions: 210333 Number of successful extensions: 519 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 513 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 519 length of database: 12,070,560 effective HSP length: 79 effective length of database: 9,783,352 effective search space used: 1428369392 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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