BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0501 (556 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC637.08 |||iron-sulfur cluster assembly ATPase Nbp35|Schizosa... 28 0.80 SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein Zds1|Sch... 22 5.3 SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr... 25 5.7 SPBC354.08c |||DUF221 family protein|Schizosaccharomyces pombe|c... 25 7.5 SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 25 7.5 >SPAC637.08 |||iron-sulfur cluster assembly ATPase Nbp35|Schizosaccharomyces pombe|chr 1|||Manual Length = 317 Score = 28.3 bits (60), Expect = 0.80 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Frame = +1 Query: 289 YICQRITXVS*GQL--SEDRNLAWSKRAKAGLIQMFSTHRDCESTAY 423 Y+C + +S G L SED ++ W K GLI+ F + E+ Y Sbjct: 127 YVCPNLAVMSIGFLLPSEDSSVIWRGPKKNGLIKQFIKDVNWENLDY 173 >SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein Zds1|Schizosaccharomyces pombe|chr 1|||Manual Length = 938 Score = 22.2 bits (45), Expect(2) = 5.3 Identities = 7/11 (63%), Positives = 10/11 (90%) Frame = -2 Query: 297 TDVPPQSNSPP 265 T++PP S+SPP Sbjct: 747 TEIPPVSSSPP 757 Score = 21.4 bits (43), Expect(2) = 5.3 Identities = 9/26 (34%), Positives = 14/26 (53%) Frame = -2 Query: 288 PPQSNSPPGSVPNRITREF*TATSVS 211 PP +++PP + P E TSV+ Sbjct: 756 PPHNDAPPKAKPISAPSELPNTTSVA 781 >SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr 1|||Manual Length = 1517 Score = 25.4 bits (53), Expect = 5.7 Identities = 12/22 (54%), Positives = 15/22 (68%) Frame = -1 Query: 406 SPYAY*TSGSSQLLPFCSTRGF 341 SPYA+ T S+ L PF STR + Sbjct: 1211 SPYAFSTVYSNCLNPFISTRSY 1232 >SPBC354.08c |||DUF221 family protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 865 Score = 25.0 bits (52), Expect = 7.5 Identities = 11/25 (44%), Positives = 13/25 (52%) Frame = -1 Query: 322 LRTXALFFDRCTAPVKLPAWQCPEP 248 LRT +DRC P+K W EP Sbjct: 53 LRTKFNTYDRCIPPMKKSLWGWIEP 77 >SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces pombe|chr 1|||Manual Length = 3655 Score = 25.0 bits (52), Expect = 7.5 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = -3 Query: 470 NFSGTSC*KLFILKDR*AVLSQSL 399 N G S KLFI+KD V+SQ L Sbjct: 3491 NIGGRSPQKLFIVKDSGQVMSQDL 3514 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,065,866 Number of Sequences: 5004 Number of extensions: 39024 Number of successful extensions: 86 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 84 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 86 length of database: 2,362,478 effective HSP length: 69 effective length of database: 2,017,202 effective search space used: 231978230 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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