Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0501
         (556 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118441-1|AAM48470.1|  961|Drosophila melanogaster SD06668p pro...    30   2.4  
AE014297-3591|AAS65210.1|  715|Drosophila melanogaster CG6695-PB...    30   2.4  
AE014297-3590|AAF56321.3|  961|Drosophila melanogaster CG6695-PA...    30   2.4  
BT023953-1|ABB36457.1|  509|Drosophila melanogaster GH08757p pro...    28   9.7  

>AY118441-1|AAM48470.1|  961|Drosophila melanogaster SD06668p
           protein.
          Length = 961

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
 Frame = -3

Query: 281 SQTPRLAVSRTGSRGSFKRRRAFPPR-HHSARLERNTVRXRYY-RPRTASXXPSK 123
           S++  ++ SR+GSR S  RRR+   R +H     R+  R RYY R R+ S   S+
Sbjct: 426 SRSATVSRSRSGSRRSGSRRRSRRSRSYHRRSRTRSRRRRRYYSRSRSRSRSRSR 480


>AE014297-3591|AAS65210.1|  715|Drosophila melanogaster CG6695-PB,
           isoform B protein.
          Length = 715

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
 Frame = -3

Query: 281 SQTPRLAVSRTGSRGSFKRRRAFPPR-HHSARLERNTVRXRYY-RPRTASXXPSK 123
           S++  ++ SR+GSR S  RRR+   R +H     R+  R RYY R R+ S   S+
Sbjct: 426 SRSATVSRSRSGSRRSGSRRRSRRSRSYHRRSRTRSRRRRRYYSRSRSRSRSRSR 480


>AE014297-3590|AAF56321.3|  961|Drosophila melanogaster CG6695-PA,
           isoform A protein.
          Length = 961

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
 Frame = -3

Query: 281 SQTPRLAVSRTGSRGSFKRRRAFPPR-HHSARLERNTVRXRYY-RPRTASXXPSK 123
           S++  ++ SR+GSR S  RRR+   R +H     R+  R RYY R R+ S   S+
Sbjct: 426 SRSATVSRSRSGSRRSGSRRRSRRSRSYHRRSRTRSRRRRRYYSRSRSRSRSRSR 480


>BT023953-1|ABB36457.1|  509|Drosophila melanogaster GH08757p
           protein.
          Length = 509

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 16/71 (22%), Positives = 31/71 (43%)
 Frame = -2

Query: 387 HLDQASFCPFAPREVSVLAELALGHXRYSLTDVPPQSNSPPGSVPNRITREF*TATSVSA 208
           +L  + F P+ P   +  A        Y+ +  P  + +PP S  +++      ATS ++
Sbjct: 423 NLVHSHFLPYVPTTTASTATATNAIATYAASATPSPTPTPPPSAGHQLPMGHANATSTTS 482

Query: 207 TSPLCTLGTKH 175
           T+   T  T +
Sbjct: 483 TANTTTTTTTY 493


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,175,837
Number of Sequences: 53049
Number of extensions: 468069
Number of successful extensions: 1111
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1111
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2131214097
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)