Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0501
         (556 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF022980-10|AAG24193.1|  350|Caenorhabditis elegans Serpentine r...    28   3.9  
AC006712-8|AAU20838.1|  450|Caenorhabditis elegans Hypothetical ...    27   6.9  

>AF022980-10|AAG24193.1|  350|Caenorhabditis elegans Serpentine
           receptor, class j protein44 protein.
          Length = 350

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +2

Query: 86  SSLKNHYFHCFITYSVXRKRCAVDNIGXARCFVPSVQSGDVAE 214
           SSL  H+FH F+T SV     A  ++  A C+ P   + ++ E
Sbjct: 123 SSLTRHHFHWFMTGSVY-MLFAYFSVWHATCYFPGKANSELLE 164


>AC006712-8|AAU20838.1|  450|Caenorhabditis elegans Hypothetical
           protein Y119C1B.3 protein.
          Length = 450

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -3

Query: 284 PSQTPRLAVSRTGSRGSFKRRRAFPPRHHSARLER 180
           P++TP+   S      S +R + FP  HH  RL+R
Sbjct: 409 PTRTPKQRRSSRIRSISDEREQLFPRHHHGRRLDR 443


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,646,671
Number of Sequences: 27780
Number of extensions: 229386
Number of successful extensions: 541
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 541
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1134321766
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)