Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0500
         (385 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_7588| Best HMM Match : DcpS (HMM E-Value=0)                         44   3e-05
SB_15991| Best HMM Match : SCP (HMM E-Value=2.3e-23)                   31   0.24 
SB_42101| Best HMM Match : Tryp_alpha_amyl (HMM E-Value=3.6)           27   5.2  
SB_36759| Best HMM Match : Tryp_alpha_amyl (HMM E-Value=3.6)           27   5.2  

>SB_7588| Best HMM Match : DcpS (HMM E-Value=0)
          Length = 446

 Score = 44.4 bits (100), Expect = 3e-05
 Identities = 18/40 (45%), Positives = 25/40 (62%)
 Frame = +2

Query: 257 TQLXTFFENXIYGNFXCFPXSTINGVKTTIIYPAXXKHIA 376
           T+L     N +YG +  +P  T N +KTT+IYPA  +HIA
Sbjct: 240 TKLSVDMRNDVYGQYIGYPAPTANTIKTTVIYPATAQHIA 279


>SB_15991| Best HMM Match : SCP (HMM E-Value=2.3e-23)
          Length = 1189

 Score = 31.5 bits (68), Expect = 0.24
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = -2

Query: 159 QPHKLFXC*CYCSIFSPKQSLSILTDCHLDCCRFH 55
           QPH    C   CS  +P  +L   T CH+DCC FH
Sbjct: 833 QPHTAAVCPQPCS--AP--TLCYHTGCHVDCCAFH 863


>SB_42101| Best HMM Match : Tryp_alpha_amyl (HMM E-Value=3.6)
          Length = 307

 Score = 27.1 bits (57), Expect = 5.2
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -2

Query: 111 PKQSLSILTDCHLDCCRFHCQFSTFYNAA 25
           P + + +   CH+D  RFHC  +  Y  +
Sbjct: 152 PHRYIEVPLYCHIDISRFHCIATLLYRGS 180


>SB_36759| Best HMM Match : Tryp_alpha_amyl (HMM E-Value=3.6)
          Length = 357

 Score = 27.1 bits (57), Expect = 5.2
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -2

Query: 111 PKQSLSILTDCHLDCCRFHCQFSTFYNAA 25
           P + + +   CH+D  RFHC  +  Y  +
Sbjct: 156 PHRYIEVPLYCHIDISRFHCIATLLYRGS 184


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,547,879
Number of Sequences: 59808
Number of extensions: 122872
Number of successful extensions: 204
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 204
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 656970245
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)