Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0500
         (385 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001389-1|AAN71144.1|  374|Drosophila melanogaster GH04919p pro...    49   2e-06
AE014297-342|AAF51960.1|  374|Drosophila melanogaster CG2091-PA ...    49   2e-06

>BT001389-1|AAN71144.1|  374|Drosophila melanogaster GH04919p
           protein.
          Length = 374

 Score = 49.2 bits (112), Expect = 2e-06
 Identities = 23/53 (43%), Positives = 30/53 (56%)
 Frame = +2

Query: 227 PKXRGLFLQKTQLXTFFENXIYGNFXCFPXSTINGVKTTIIYPAXXKHIAKFS 385
           PK    F    ++ T F N IYG+F   P   +  VK+T+IYPA  KHI K+S
Sbjct: 72  PKKPSYFTADLKVDTEFINNIYGSFQVVPTQDLCSVKSTVIYPATEKHIEKYS 124



 Score = 34.7 bits (76), Expect = 0.042
 Identities = 16/45 (35%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
 Frame = +3

Query: 102 FVLEKILNNNTNRXTACVVGKFKDK-SGVALILFEKNAFKXNXLS 233
           F L++IL NN+ R +  ++G F D  +  A+++FEKNA++ + ++
Sbjct: 20  FQLKRILTNNSVRKSISLLGTFPDLGTDDAIVVFEKNAYRESDVA 64


>AE014297-342|AAF51960.1|  374|Drosophila melanogaster CG2091-PA
           protein.
          Length = 374

 Score = 49.2 bits (112), Expect = 2e-06
 Identities = 23/53 (43%), Positives = 30/53 (56%)
 Frame = +2

Query: 227 PKXRGLFLQKTQLXTFFENXIYGNFXCFPXSTINGVKTTIIYPAXXKHIAKFS 385
           PK    F    ++ T F N IYG+F   P   +  VK+T+IYPA  KHI K+S
Sbjct: 72  PKKPSYFTADLKVDTEFINNIYGSFQVVPTQDLCSVKSTVIYPATEKHIEKYS 124



 Score = 34.7 bits (76), Expect = 0.042
 Identities = 16/45 (35%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
 Frame = +3

Query: 102 FVLEKILNNNTNRXTACVVGKFKDK-SGVALILFEKNAFKXNXLS 233
           F L++IL NN+ R +  ++G F D  +  A+++FEKNA++ + ++
Sbjct: 20  FQLKRILTNNSVRKSISLLGTFPDLGTDDAIVVFEKNAYRESDVA 64


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,959,578
Number of Sequences: 53049
Number of extensions: 169916
Number of successful extensions: 287
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 284
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 287
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1045179750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)