Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0500
         (385 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY079166-1|AAL86013.1|  311|Caenorhabditis elegans heat shock-li...    28   2.0  
AL132858-5|CAB60481.1|  311|Caenorhabditis elegans Hypothetical ...    28   2.0  

>AY079166-1|AAL86013.1|  311|Caenorhabditis elegans heat shock-like
           protein protein.
          Length = 311

 Score = 28.3 bits (60), Expect = 2.0
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = +2

Query: 248 LQKTQLXTFFENXIYGNFXCFPXSTINGVKTTIIYPAXXKHIAKF 382
           L   QL     N I+G++       +N +K+ +IYP   + IAK+
Sbjct: 73  LATAQLQEISRNDIFGSYNIEIDPKLNLLKSQLIYPINDRLIAKY 117


>AL132858-5|CAB60481.1|  311|Caenorhabditis elegans Hypothetical
           protein Y113G7A.9 protein.
          Length = 311

 Score = 28.3 bits (60), Expect = 2.0
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = +2

Query: 248 LQKTQLXTFFENXIYGNFXCFPXSTINGVKTTIIYPAXXKHIAKF 382
           L   QL     N I+G++       +N +K+ +IYP   + IAK+
Sbjct: 73  LATAQLQEISRNDIFGSYNIEIDPKLNLLKSQLIYPINDRLIAKY 117


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,530,361
Number of Sequences: 27780
Number of extensions: 98507
Number of successful extensions: 166
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 166
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 566277334
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)