Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0497
         (563 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   2.4  
AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    22   3.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   5.5  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   5.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   5.5  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   5.5  
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    21   9.6  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    21   9.6  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 9/27 (33%), Positives = 12/27 (44%)
 Frame = +3

Query: 426 GQQREDDPXHVRXIQHARHVRRHPSRA 506
           GQ    DP  V   +   H+  HP +A
Sbjct: 903 GQYTTKDPNEVTCDEEEGHISYHPDKA 929


>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 280 PDPQIPHRTRNRH 318
           PD  +P RT NRH
Sbjct: 110 PDNFLPERTANRH 122


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -2

Query: 349 MPNLLHVIPVSDDSVFD 299
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371



 Score = 20.6 bits (41), Expect = 9.6
 Identities = 10/35 (28%), Positives = 14/35 (40%)
 Frame = +2

Query: 212  GRDGRYGTEGLLCRNEAQSKRGILTLKYPIEHGIV 316
            G    YG   ++ RN   S    +  K   E+G V
Sbjct: 1491 GAKNEYGNNNVVARNHRNSVASSIPAKDVFENGHV 1525


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -2

Query: 349 MPNLLHVIPVSDDSVFD 299
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371



 Score = 20.6 bits (41), Expect = 9.6
 Identities = 10/35 (28%), Positives = 14/35 (40%)
 Frame = +2

Query: 212  GRDGRYGTEGLLCRNEAQSKRGILTLKYPIEHGIV 316
            G    YG   ++ RN   S    +  K   E+G V
Sbjct: 1491 GAKNEYGNNNVVARNHRNSVASSIPAKDVFENGHV 1525


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -2

Query: 349 MPNLLHVIPVSDDSVFD 299
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371



 Score = 20.6 bits (41), Expect = 9.6
 Identities = 10/35 (28%), Positives = 14/35 (40%)
 Frame = +2

Query: 212  GRDGRYGTEGLLCRNEAQSKRGILTLKYPIEHGIV 316
            G    YG   ++ RN   S    +  K   E+G V
Sbjct: 1491 GAKNEYGNNNVVARNHRNSVASSIPAKDVFENGHV 1525


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -2

Query: 349 MPNLLHVIPVSDDSVFD 299
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371



 Score = 20.6 bits (41), Expect = 9.6
 Identities = 10/35 (28%), Positives = 14/35 (40%)
 Frame = +2

Query: 212  GRDGRYGTEGLLCRNEAQSKRGILTLKYPIEHGIV 316
            G    YG   ++ RN   S    +  K   E+G V
Sbjct: 1491 GAKNEYGNNNVVARNHRNSVASSIPAKDVFENGHV 1525


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 185 LDRGKAPPSGRD 220
           LDRGK  P G++
Sbjct: 49  LDRGKCSPDGQE 60


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 185 LDRGKAPPSGRD 220
           LDRGK  P G++
Sbjct: 49  LDRGKCSPDGQE 60


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,115
Number of Sequences: 336
Number of extensions: 2892
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13890653
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)