Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0497
(563 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 120 8e-28
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 116 2e-26
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 116 2e-26
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 114 5e-26
SB_56| Best HMM Match : Actin (HMM E-Value=0) 114 5e-26
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 113 1e-25
SB_54| Best HMM Match : Actin (HMM E-Value=0) 72 4e-13
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 8e-11
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 64 1e-10
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 58 5e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 50 2e-06
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 47 9e-06
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 41 6e-04
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 40 0.001
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 32 0.28
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.37
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 32 0.37
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 32 0.37
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.37
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 32 0.37
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.37
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.49
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.49
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 31 0.49
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 30 1.5
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 30 1.5
SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2) 29 2.0
SB_56842| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 28 4.6
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_28762| Best HMM Match : RVT_1 (HMM E-Value=3.9e-23) 28 4.6
SB_23472| Best HMM Match : HIT (HMM E-Value=0.43) 28 6.1
SB_18966| Best HMM Match : RVT_1 (HMM E-Value=0.028) 28 6.1
SB_25064| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_19427| Best HMM Match : RVT_1 (HMM E-Value=7.5e-32) 28 6.1
SB_12041| Best HMM Match : PHD (HMM E-Value=0.001) 28 6.1
SB_12008| Best HMM Match : RVT_1 (HMM E-Value=0) 28 6.1
SB_57561| Best HMM Match : fn3 (HMM E-Value=0) 27 8.0
SB_57037| Best HMM Match : RVT_1 (HMM E-Value=3.4e-15) 27 8.0
SB_46483| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.0
SB_43617| Best HMM Match : RVT_1 (HMM E-Value=3e-21) 27 8.0
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.0
SB_36120| Best HMM Match : zf-MIZ (HMM E-Value=3.9) 27 8.0
SB_35376| Best HMM Match : RVT_1 (HMM E-Value=0) 27 8.0
SB_34116| Best HMM Match : RVT_1 (HMM E-Value=0) 27 8.0
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 27 8.0
SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.0
SB_21844| Best HMM Match : RVT_1 (HMM E-Value=0) 27 8.0
SB_15607| Best HMM Match : zf-MIZ (HMM E-Value=3.9) 27 8.0
SB_59500| Best HMM Match : RVT_1 (HMM E-Value=0.015) 27 8.0
SB_53316| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.0
SB_52464| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.0
SB_51232| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.0
SB_36891| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.0
SB_30407| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.0
SB_19106| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.0
SB_12274| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.0
SB_11572| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.0
SB_11067| Best HMM Match : RVT_1 (HMM E-Value=0) 27 8.0
SB_10020| Best HMM Match : Extensin_2 (HMM E-Value=0.88) 27 8.0
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 120 bits (289), Expect = 8e-28
Identities = 54/62 (87%), Positives = 59/62 (95%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGEDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
MCD++VAALVVDNGSGMCKAGFAG+DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
Score = 105 bits (253), Expect = 2e-23
Identities = 45/46 (97%), Positives = 46/46 (100%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 391
+EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 102
Score = 82.6 bits (195), Expect = 2e-16
Identities = 42/61 (68%), Positives = 44/61 (72%)
Frame = +1
Query: 379 PRGTPVLLTEXPLNPKANREKMTQXMFEXFNTPAMYVAIQAVLCCTRSVVPXVFVLDFGD 558
P PVLLTE PLNPKANREKMTQ MFE FN+PAMYVAIQAVL S V+D GD
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGD 158
Query: 559 G 561
G
Sbjct: 159 G 159
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 116 bits (278), Expect = 2e-26
Identities = 53/62 (85%), Positives = 58/62 (93%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGEDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
M D+E+AALVVDNGSGMCKAGFAG+DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
Score = 105 bits (253), Expect = 2e-23
Identities = 45/46 (97%), Positives = 46/46 (100%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 391
+EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 102
Score = 82.6 bits (195), Expect = 2e-16
Identities = 42/61 (68%), Positives = 44/61 (72%)
Frame = +1
Query: 379 PRGTPVLLTEXPLNPKANREKMTQXMFEXFNTPAMYVAIQAVLCCTRSVVPXVFVLDFGD 558
P PVLLTE PLNPKANREKMTQ MFE FN+PAMYVAIQAVL S V+D GD
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGD 158
Query: 559 G 561
G
Sbjct: 159 G 159
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 116 bits (278), Expect = 2e-26
Identities = 51/62 (82%), Positives = 58/62 (93%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGEDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
M D+++AALV+DNGSGMCKAGFAG+DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
Score = 105 bits (253), Expect = 2e-23
Identities = 45/46 (97%), Positives = 46/46 (100%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 391
+EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 102
Score = 82.6 bits (195), Expect = 2e-16
Identities = 42/61 (68%), Positives = 44/61 (72%)
Frame = +1
Query: 379 PRGTPVLLTEXPLNPKANREKMTQXMFEXFNTPAMYVAIQAVLCCTRSVVPXVFVLDFGD 558
P PVLLTE PLNPKANREKMTQ MFE FN+PAMYVAIQAVL S V+D GD
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGD 158
Query: 559 G 561
G
Sbjct: 159 G 159
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 114 bits (274), Expect = 5e-26
Identities = 51/60 (85%), Positives = 57/60 (95%)
Frame = +3
Query: 93 DEEVAALVVDNGSGMCKAGFAGEDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
D++VAALV+DNGSGMCKAGFAG+DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG ++K
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 70.1 bits (164), Expect = 1e-12
Identities = 31/35 (88%), Positives = 32/35 (91%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 358
+EAQSKRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 56 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 46.0 bits (104), Expect = 2e-05
Identities = 24/44 (54%), Positives = 28/44 (63%)
Frame = +1
Query: 430 NREKMTQXMFEXFNTPAMYVAIQAVLCCTRSVVPXVFVLDFGDG 561
N + M + MFE FN+PAMYVAIQAVL S V+D GDG
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDG 121
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 114 bits (274), Expect = 5e-26
Identities = 52/60 (86%), Positives = 57/60 (95%)
Frame = +3
Query: 93 DEEVAALVVDNGSGMCKAGFAGEDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
++EVAALVVDNGSGMCKAGFAG+DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG ++K
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 105 bits (253), Expect = 2e-23
Identities = 45/46 (97%), Positives = 46/46 (100%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 391
+EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH
Sbjct: 56 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 101
Score = 82.6 bits (195), Expect = 2e-16
Identities = 42/61 (68%), Positives = 44/61 (72%)
Frame = +1
Query: 379 PRGTPVLLTEXPLNPKANREKMTQXMFEXFNTPAMYVAIQAVLCCTRSVVPXVFVLDFGD 558
P PVLLTE PLNPKANREKMTQ MFE FN+PAMYVAIQAVL S V+D GD
Sbjct: 98 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGD 157
Query: 559 G 561
G
Sbjct: 158 G 158
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 113 bits (271), Expect = 1e-25
Identities = 51/60 (85%), Positives = 57/60 (95%)
Frame = +3
Query: 93 DEEVAALVVDNGSGMCKAGFAGEDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
+++VAALVVDNGSGMCKAGFAG+DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG ++K
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 105 bits (253), Expect = 2e-23
Identities = 45/46 (97%), Positives = 46/46 (100%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 391
+EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH
Sbjct: 56 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 101
Score = 82.6 bits (195), Expect = 2e-16
Identities = 42/61 (68%), Positives = 44/61 (72%)
Frame = +1
Query: 379 PRGTPVLLTEXPLNPKANREKMTQXMFEXFNTPAMYVAIQAVLCCTRSVVPXVFVLDFGD 558
P PVLLTE PLNPKANREKMTQ MFE FN+PAMYVAIQAVL S V+D GD
Sbjct: 98 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGD 157
Query: 559 G 561
G
Sbjct: 158 G 158
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 71.7 bits (168), Expect = 4e-13
Identities = 35/57 (61%), Positives = 38/57 (66%)
Frame = +1
Query: 391 PVLLTEXPLNPKANREKMTQXMFEXFNTPAMYVAIQAVLCCTRSVVPXVFVLDFGDG 561
PVLLTE PLNPK NRE+M Q MFE FN P MYVA+QAV+ S V D GDG
Sbjct: 2147 PVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALYASGRTTGTVFDCGDG 2203
Score = 58.0 bits (134), Expect = 5e-09
Identities = 22/34 (64%), Positives = 30/34 (88%)
Frame = +3
Query: 111 LVVDNGSGMCKAGFAGEDAPRAVFPSIVGRPRHQ 212
+V+DNGSG CKAG + +++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 64.1 bits (149), Expect = 8e-11
Identities = 32/61 (52%), Positives = 38/61 (62%)
Frame = +1
Query: 379 PRGTPVLLTEXPLNPKANREKMTQXMFEXFNTPAMYVAIQAVLCCTRSVVPXVFVLDFGD 558
PR T VLLTE PLNP NREKM + MFE + +Y+AIQAVL + V+D GD
Sbjct: 102 PRNTKVLLTEPPLNPMKNREKMIEVMFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGD 161
Query: 559 G 561
G
Sbjct: 162 G 162
Score = 48.8 bits (111), Expect = 3e-06
Identities = 20/50 (40%), Positives = 32/50 (64%)
Frame = +2
Query: 209 SGRDGRYGTEGLLCRNEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 358
S + G + L+ +EA R +L + YP+++GIV NWDDM+ +W +TF
Sbjct: 44 SQKVGDIEVKDLMVGDEASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTF 93
Score = 44.4 bits (100), Expect = 7e-05
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +3
Query: 105 AALVVDNGSGMCKAGFAGEDAPRAVFPSIVGRP 203
+ +V DNG+G K G+AG + P +FPS+VGRP
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRP 39
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 63.7 bits (148), Expect = 1e-10
Identities = 30/57 (52%), Positives = 38/57 (66%)
Frame = +1
Query: 391 PVLLTEXPLNPKANREKMTQXMFEXFNTPAMYVAIQAVLCCTRSVVPXVFVLDFGDG 561
PVLLTE PLNP+ NREK + FE FN PA+++++QAVL + VLD GDG
Sbjct: 128 PVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDG 184
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 58.0 bits (134), Expect = 5e-09
Identities = 26/39 (66%), Positives = 29/39 (74%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGEDAPRAVFPSIVGRPRHQ 212
E LV+D GS M K GFAG+DAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 49.6 bits (113), Expect = 2e-06
Identities = 20/49 (40%), Positives = 32/49 (65%)
Frame = +3
Query: 81 FKMCDEEVAALVVDNGSGMCKAGFAGEDAPRAVFPSIVGRPRHQGVMVG 227
FK+ A+V+DNG G+ K GFAG+ PR + P++VG P+ +++G
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 47.2 bits (107), Expect = 9e-06
Identities = 21/48 (43%), Positives = 27/48 (56%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHQF 397
+EA K T K+PI H IV +WD ME+ W + LR PE+H F
Sbjct: 288 DEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYF 334
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 41.1 bits (92), Expect = 6e-04
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +1
Query: 391 PVLLTEXPLNPKANREKMTQXMFEXFNTPAMYVAIQAVLCCTRSVVPXVFVLDFG 555
P+L++E N + REK+T+ MFE +N PA ++ +VL + V+D G
Sbjct: 35 PLLMSEAAWNTRIKREKLTELMFEKYNVPAFFLCKNSVLTAFANGRSNGLVIDSG 89
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = -1
Query: 209 MAGPSHDRGEHGARSIFSCETGLAHTGAIV 120
MA + D GE+G+ SI S ETGLAHTGAI+
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAII 30
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 39.9 bits (89), Expect = 0.001
Identities = 21/36 (58%), Positives = 23/36 (63%)
Frame = +1
Query: 454 MFEXFNTPAMYVAIQAVLCCTRSVVPXVFVLDFGDG 561
MFE FN+PA+YVAIQAVL S V D GDG
Sbjct: 2 MFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDG 37
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 32.3 bits (70), Expect = 0.28
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = -1
Query: 242 VLLSHTDHHALMAGPSHDRGEHGARSIFSCETGLAHT 132
V+LSH + H M D +HG RS FSCET L T
Sbjct: 224 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVPT 259
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 31.9 bits (69), Expect = 0.37
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = -1
Query: 242 VLLSHTDHHALMAGPSHDRGEHGARSIFSCETGLAHT 132
V+LSH + H M D +HG RS FSCET L T
Sbjct: 419 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 454
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 31.9 bits (69), Expect = 0.37
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = -1
Query: 242 VLLSHTDHHALMAGPSHDRGEHGARSIFSCETGLAHT 132
V+LSH + H M D +HG RS FSCET L T
Sbjct: 282 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 317
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 31.9 bits (69), Expect = 0.37
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = -1
Query: 242 VLLSHTDHHALMAGPSHDRGEHGARSIFSCETGLAHT 132
V+LSH + H M D +HG RS FSCET L T
Sbjct: 260 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 295
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 31.9 bits (69), Expect = 0.37
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = -1
Query: 242 VLLSHTDHHALMAGPSHDRGEHGARSIFSCETGLAHT 132
V+LSH + H M D +HG RS FSCET L T
Sbjct: 102 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 31.9 bits (69), Expect = 0.37
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = -1
Query: 242 VLLSHTDHHALMAGPSHDRGEHGARSIFSCETGLAHT 132
V+LSH + H M D +HG RS FSCET L T
Sbjct: 102 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 31.9 bits (69), Expect = 0.37
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = -1
Query: 242 VLLSHTDHHALMAGPSHDRGEHGARSIFSCETGLAHT 132
V+LSH + H M D +HG RS FSCET L T
Sbjct: 136 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 171
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.49
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 184 GNTARGASSPAKPALHIPEPLSTT 113
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.49
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 184 GNTARGASSPAKPALHIPEPLSTT 113
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 31.5 bits (68), Expect = 0.49
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = -1
Query: 242 VLLSHTDHHALMAGPSHDRGEHGARSIFSCETGLAHT 132
++LSH + H M D +HG RS FSCET L T
Sbjct: 184 IVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 219
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2
Query: 184 GNTARGASSPAKPALHIPEPLSTT 113
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 29.9 bits (64), Expect = 1.5
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +2
Query: 179 VPLDRGKAPPSGRDGRYGTEGLLCRNEAQSKRGILTLKYPIEHGIVTNW--DDMEKIWHH 352
V L + +GR+ G+ +CR +A ++TL + I G+ + D EK+W+H
Sbjct: 441 VTLSQNVVSVTGREESGGSGTQVCRKKAP----LITLSHVIRMGLALSLVSDVKEKVWYH 496
Query: 353 TFYN 364
T N
Sbjct: 497 TCPN 500
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +3
Query: 411 SPQPQGQQREDDPXHVRXIQHARHVRRHPSR 503
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 29.9 bits (64), Expect = 1.5
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 296 PIEHGIVTNWDDMEKIWHHTFYNE 367
P + G + NWD ++IW +TF E
Sbjct: 292 PFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 27.5 bits (58), Expect = 8.0
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +3
Query: 99 EVAALVVDNGSGMCKAGFAGEDAPRAV 179
++A LV+D G+ K GFA APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258
>SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2)
Length = 563
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +2
Query: 455 CSXHSTRPPCTSPSKPCSAVRVRSYXRY 538
C H+ R P T+PS PC V S Y
Sbjct: 360 CYSHARREPSTAPSLPCDLVAATSAKMY 387
>SB_56842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 334
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -3
Query: 318 VTIPCSMGYLRVRIPLLLCASFLHKSPSVP 229
V PC M LRVR+ C S LH + P
Sbjct: 60 VACPCCMSLLRVRVVCPCCMSVLHVRVACP 89
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +3
Query: 105 AALVVDNGSGMCKAGFAGEDAPRAVFPSIVGRPRH 209
+ +++D GS KAGFA E+A + + S++G H
Sbjct: 483 SVIIIDLGSSSVKAGFAQEEA-QVFYISLIGILEH 516
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 184 GNTARGASSPAKPALHIPEPLSTT 113
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -2
Query: 184 GNTARGASSPAKPALHIPEPLSTT 113
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_28762| Best HMM Match : RVT_1 (HMM E-Value=3.9e-23)
Length = 409
Score = 28.3 bits (60), Expect = 4.6
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = -1
Query: 242 VLLSHTDHHALMAGPSHDRGEHGARSIFSCETGL 141
++LSH + H L A +HG RS FSCET L
Sbjct: 4 IVLSHLNKH-LSAFNILSEMQHGFRSGFSCETQL 36
>SB_23472| Best HMM Match : HIT (HMM E-Value=0.43)
Length = 168
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -1
Query: 257 HSYIRVLLSHTDHHALMAGPSHDRGEHGARSIFSCETGLAHT 132
H +++H D H ++ + +HG R FSCET L T
Sbjct: 44 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 80
>SB_18966| Best HMM Match : RVT_1 (HMM E-Value=0.028)
Length = 252
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -1
Query: 257 HSYIRVLLSHTDHHALMAGPSHDRGEHGARSIFSCETGLAHT 132
H +++H D H ++ + +HG R FSCET L T
Sbjct: 89 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 125
>SB_25064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1134
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -1
Query: 257 HSYIRVLLSHTDHHALMAGPSHDRGEHGARSIFSCETGLAHT 132
H +++H D H ++ + +HG R FSCET L T
Sbjct: 673 HIIFHDIMNHIDTHNILV-----KFQHGFRRFFSCETQLITT 709
>SB_19427| Best HMM Match : RVT_1 (HMM E-Value=7.5e-32)
Length = 698
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -1
Query: 257 HSYIRVLLSHTDHHALMAGPSHDRGEHGARSIFSCETGLAHT 132
H +++H D H ++ + +HG R FSCET L T
Sbjct: 292 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 328
>SB_12041| Best HMM Match : PHD (HMM E-Value=0.001)
Length = 560
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -1
Query: 257 HSYIRVLLSHTDHHALMAGPSHDRGEHGARSIFSCETGLAHT 132
H +++H D H ++ + +HG R FSCET L T
Sbjct: 503 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 539
>SB_12008| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 979
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -1
Query: 257 HSYIRVLLSHTDHHALMAGPSHDRGEHGARSIFSCETGLAHT 132
H +++H D H ++ + +HG R FSCET L T
Sbjct: 129 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 165
>SB_57561| Best HMM Match : fn3 (HMM E-Value=0)
Length = 1614
Score = 27.5 bits (58), Expect = 8.0
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = -1
Query: 218 HALMAGPSH--DRGEHGARSIFSCETGLAHTGAIVY 117
++L+A P + G H + S+F+C T +A G VY
Sbjct: 319 YSLIATPLNGTSAGAHNSISVFTCNTSVAIAGLAVY 354
>SB_57037| Best HMM Match : RVT_1 (HMM E-Value=3.4e-15)
Length = 291
Score = 27.5 bits (58), Expect = 8.0
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = -1
Query: 242 VLLSHTDHHALMAGPSHDRGEHGARSIFSCETGL 141
V+LSH + H L A +HG R+ FSCET L
Sbjct: 4 VVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQL 36
>SB_46483| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 27.5 bits (58), Expect = 8.0
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -1
Query: 242 VLLSHTDHHALMAGPSHDRGEHGARSIFSCETGL 141
++LSH + H D +HG RS FSCET L
Sbjct: 140 IVLSHLNKHLSAFNILSDL-QHGFRSGFSCETQL 172
>SB_43617| Best HMM Match : RVT_1 (HMM E-Value=3e-21)
Length = 314
Score = 27.5 bits (58), Expect = 8.0
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -1
Query: 242 VLLSHTDHHALMAGPSHDRGEHGARSIFSCETGL 141
++LSH + H D +HG RS FSCET L
Sbjct: 4 IVLSHLNKHLSAFNILSDL-QHGFRSGFSCETQL 36
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 27.5 bits (58), Expect = 8.0
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +2
Query: 212 GRDGRYGTEGLLCRNEAQSKRGIL-TLKYPIEHGIVTNWDDMEKIWHHTF 358
GR G + GL N+ S I L+ P + +VT+++ E++ H F
Sbjct: 105 GRKGEPDSGGLAVGNDIGSVEMIRWALRTPFDRDVVTHYECQEQVLDHAF 154
>SB_36120| Best HMM Match : zf-MIZ (HMM E-Value=3.9)
Length = 209
Score = 27.5 bits (58), Expect = 8.0
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = -1
Query: 242 VLLSHTDHHALMAGPSHDRGEHGARSIFSCETGL 141
V+LSH + H L A +HG R+ FSCET L
Sbjct: 104 VVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQL 136
>SB_35376| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 931
Score = 27.5 bits (58), Expect = 8.0
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -1
Query: 242 VLLSHTDHHALMAGPSHDRGEHGARSIFSCETGL 141
++LSH + H D +HG RS FSCET L
Sbjct: 481 IVLSHLNKHLSAFNILSDL-QHGFRSGFSCETQL 513
>SB_34116| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 522
Score = 27.5 bits (58), Expect = 8.0
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = -1
Query: 242 VLLSHTDHHALMAGPSHDRGEHGARSIFSCETGL 141
V+LSH + H L A +HG R+ FSCET L
Sbjct: 104 VVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQL 136
>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
Length = 892
Score = 27.5 bits (58), Expect = 8.0
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = -1
Query: 242 VLLSHTDHHALMAGPSHDRGEHGARSIFSCETGL 141
V+LSH + H L A +HG R+ FSCET L
Sbjct: 474 VVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQL 506
>SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 27.5 bits (58), Expect = 8.0
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -2
Query: 199 LPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSH 89
L IE + A++P P + +P+ + +AAT +SH
Sbjct: 222 LRRIERSNIPQATAPGTPGVPVPQAVHGVSAATQASH 258
>SB_21844| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 411
Score = 27.5 bits (58), Expect = 8.0
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -1
Query: 242 VLLSHTDHHALMAGPSHDRGEHGARSIFSCETGL 141
++LSH + H D +HG RS FSCET L
Sbjct: 89 IVLSHLNKHLSAFNILSDL-QHGFRSGFSCETQL 121
>SB_15607| Best HMM Match : zf-MIZ (HMM E-Value=3.9)
Length = 221
Score = 27.5 bits (58), Expect = 8.0
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = -1
Query: 242 VLLSHTDHHALMAGPSHDRGEHGARSIFSCETGL 141
V+LSH + H L A +HG R+ FSCET L
Sbjct: 137 VVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQL 169
>SB_59500| Best HMM Match : RVT_1 (HMM E-Value=0.015)
Length = 224
Score = 27.5 bits (58), Expect = 8.0
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = -1
Query: 242 VLLSHTDHHALMAGPSHDRGEHGARSIFSCETGL 141
V+LSH + H L A +HG R+ FSCET L
Sbjct: 54 VVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQL 86
>SB_53316| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 228
Score = 27.5 bits (58), Expect = 8.0
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +3
Query: 345 GIIPSTM-SCVSPPRNTSSAH*GSPQPQGQQREDD-PXHVRXIQHARHVRRH 494
G +PS++ S VS +A G+ G QR D P H + I + RH + H
Sbjct: 53 GYLPSSIRSEVSAKARLPTARKGAWITHGAQRLIDYPQHAKVIDYPRHAKAH 104
>SB_52464| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2529
Score = 27.5 bits (58), Expect = 8.0
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -1
Query: 242 VLLSHTDHHALMAGPSHDRGEHGARSIFSCETGL 141
++LSH + H D +HG RS FSCET L
Sbjct: 1207 IVLSHLNKHLSAFNILSDL-QHGFRSGFSCETQL 1239
>SB_51232| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1676
Score = 27.5 bits (58), Expect = 8.0
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = -1
Query: 242 VLLSHTDHHALMAGPSHDRGEHGARSIFSCETGL 141
V+LSH + H L A +HG R+ FSCET L
Sbjct: 726 VVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQL 758
>SB_36891| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2124
Score = 27.5 bits (58), Expect = 8.0
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -1
Query: 242 VLLSHTDHHALMAGPSHDRGEHGARSIFSCETGL 141
++LSH + H D +HG RS FSCET L
Sbjct: 1871 IVLSHLNKHLSAFNILSDL-QHGFRSGFSCETQL 1903
>SB_30407| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 788
Score = 27.5 bits (58), Expect = 8.0
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -1
Query: 242 VLLSHTDHHALMAGPSHDRGEHGARSIFSCETGL 141
++LSH + H D +HG RS FSCET L
Sbjct: 191 IVLSHLNKHLSAFNILSDL-QHGFRSGFSCETQL 223
>SB_19106| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 217
Score = 27.5 bits (58), Expect = 8.0
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -1
Query: 242 VLLSHTDHHALMAGPSHDRGEHGARSIFSCETGL 141
++LSH + H D +HG RS FSCET L
Sbjct: 81 IVLSHLNKHLSAFNILSDL-QHGFRSGFSCETQL 113
>SB_12274| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 295
Score = 27.5 bits (58), Expect = 8.0
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -1
Query: 242 VLLSHTDHHALMAGPSHDRGEHGARSIFSCETGL 141
++LSH + H D +HG RS FSCET L
Sbjct: 159 IVLSHLNKHLSAFNILSDL-QHGFRSGFSCETQL 191
>SB_11572| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 888
Score = 27.5 bits (58), Expect = 8.0
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -1
Query: 242 VLLSHTDHHALMAGPSHDRGEHGARSIFSCETGL 141
++LSH + H D +HG RS FSCET L
Sbjct: 220 IVLSHLNKHLSAFNILSDL-QHGFRSGFSCETQL 252
>SB_11067| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1176
Score = 27.5 bits (58), Expect = 8.0
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = -1
Query: 242 VLLSHTDHHALMAGPSHDRGEHGARSIFSCETGL 141
V+LSH + H L A +HG R+ FSCET L
Sbjct: 810 VVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQL 842
>SB_10020| Best HMM Match : Extensin_2 (HMM E-Value=0.88)
Length = 379
Score = 27.5 bits (58), Expect = 8.0
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Frame = -3
Query: 330 SSQLVTI--PCSMGYLRV-RIPLLLCASFLHKSPSVPYRP 220
S LV++ P S Y + RIP LC L PS PY+P
Sbjct: 260 SPSLVSLQAPLSYSYKPLPRIPSSLCLLSLQAPPSYPYKP 299
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,429,799
Number of Sequences: 59808
Number of extensions: 414818
Number of successful extensions: 1475
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 1281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1474
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1325051197
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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