Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0497
(563 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 104 5e-23
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 104 5e-23
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 103 6e-23
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 103 6e-23
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 103 6e-23
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 103 6e-23
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 103 8e-23
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 103 8e-23
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 103 8e-23
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 97 9e-21
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 89 2e-18
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 85 3e-17
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 58 3e-09
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 58 3e-09
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 58 4e-09
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 51 5e-07
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 44 7e-05
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 40 0.002
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.075
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 34 0.075
At1g16690.2 68414.m01999 transcription factor-related similar to... 28 5.0
At1g16690.1 68414.m01998 transcription factor-related similar to... 28 5.0
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 6.5
At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin ... 27 6.5
At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit (... 27 8.7
At1g71850.1 68414.m08303 expressed protein ; expression supporte... 27 8.7
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 104 bits (249), Expect = 5e-23
Identities = 44/46 (95%), Positives = 46/46 (100%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 391
+EAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEH
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEH 103
Score = 98.3 bits (234), Expect = 3e-21
Identities = 44/59 (74%), Positives = 51/59 (86%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGEDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
E++ LV DNG+GM KAGFAG+DAPRAVFPSIVGRPRH GVMVGMGQKD+YVG ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 83.0 bits (196), Expect = 1e-16
Identities = 43/61 (70%), Positives = 43/61 (70%)
Frame = +1
Query: 379 PRGTPVLLTEXPLNPKANREKMTQXMFEXFNTPAMYVAIQAVLCCTRSVVPXVFVLDFGD 558
P PVLLTE PLNPKANREKMTQ MFE FN PAMYVAIQAVL S VLD GD
Sbjct: 100 PEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGD 159
Query: 559 G 561
G
Sbjct: 160 G 160
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 104 bits (249), Expect = 5e-23
Identities = 44/46 (95%), Positives = 46/46 (100%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 391
+EAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEH
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEH 103
Score = 98.3 bits (234), Expect = 3e-21
Identities = 44/59 (74%), Positives = 51/59 (86%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGEDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
E++ LV DNG+GM KAGFAG+DAPRAVFPSIVGRPRH GVMVGMGQKD+YVG ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 85.0 bits (201), Expect = 3e-17
Identities = 44/61 (72%), Positives = 44/61 (72%)
Frame = +1
Query: 379 PRGTPVLLTEXPLNPKANREKMTQXMFEXFNTPAMYVAIQAVLCCTRSVVPXVFVLDFGD 558
P PVLLTE PLNPKANREKMTQ MFE FNTPAMYVAIQAVL S VLD GD
Sbjct: 100 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 159
Query: 559 G 561
G
Sbjct: 160 G 160
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 103 bits (248), Expect = 6e-23
Identities = 44/46 (95%), Positives = 45/46 (97%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 391
+EAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEH
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEH 103
Score = 98.3 bits (234), Expect = 3e-21
Identities = 44/59 (74%), Positives = 51/59 (86%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGEDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
E++ LV DNG+GM KAGFAG+DAPRAVFPSIVGRPRH GVMVGMGQKD+YVG ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 85.0 bits (201), Expect = 3e-17
Identities = 44/61 (72%), Positives = 44/61 (72%)
Frame = +1
Query: 379 PRGTPVLLTEXPLNPKANREKMTQXMFEXFNTPAMYVAIQAVLCCTRSVVPXVFVLDFGD 558
P PVLLTE PLNPKANREKMTQ MFE FNTPAMYVAIQAVL S VLD GD
Sbjct: 100 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 159
Query: 559 G 561
G
Sbjct: 160 G 160
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 103 bits (248), Expect = 6e-23
Identities = 44/46 (95%), Positives = 45/46 (97%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 391
+EAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEH
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEH 103
Score = 98.3 bits (234), Expect = 3e-21
Identities = 44/59 (74%), Positives = 51/59 (86%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGEDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
E++ LV DNG+GM KAGFAG+DAPRAVFPSIVGRPRH GVMVGMGQKD+YVG ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 82.6 bits (195), Expect = 2e-16
Identities = 42/61 (68%), Positives = 43/61 (70%)
Frame = +1
Query: 379 PRGTPVLLTEXPLNPKANREKMTQXMFEXFNTPAMYVAIQAVLCCTRSVVPXVFVLDFGD 558
P P+LLTE PLNPKANREKMTQ MFE FN PAMYVAIQAVL S VLD GD
Sbjct: 100 PEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGD 159
Query: 559 G 561
G
Sbjct: 160 G 160
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 103 bits (248), Expect = 6e-23
Identities = 44/46 (95%), Positives = 45/46 (97%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 391
+EAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEH
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEH 103
Score = 98.3 bits (234), Expect = 3e-21
Identities = 44/59 (74%), Positives = 51/59 (86%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGEDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
E++ LV DNG+GM KAGFAG+DAPRAVFPSIVGRPRH GVMVGMGQKD+YVG ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 85.0 bits (201), Expect = 3e-17
Identities = 44/61 (72%), Positives = 44/61 (72%)
Frame = +1
Query: 379 PRGTPVLLTEXPLNPKANREKMTQXMFEXFNTPAMYVAIQAVLCCTRSVVPXVFVLDFGD 558
P PVLLTE PLNPKANREKMTQ MFE FNTPAMYVAIQAVL S VLD GD
Sbjct: 100 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 159
Query: 559 G 561
G
Sbjct: 160 G 160
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 103 bits (248), Expect = 6e-23
Identities = 44/46 (95%), Positives = 45/46 (97%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 391
+EAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEH
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEH 103
Score = 98.3 bits (234), Expect = 3e-21
Identities = 44/59 (74%), Positives = 51/59 (86%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGEDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
E++ LV DNG+GM KAGFAG+DAPRAVFPSIVGRPRH GVMVGMGQKD+YVG ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 82.6 bits (195), Expect = 2e-16
Identities = 42/61 (68%), Positives = 43/61 (70%)
Frame = +1
Query: 379 PRGTPVLLTEXPLNPKANREKMTQXMFEXFNTPAMYVAIQAVLCCTRSVVPXVFVLDFGD 558
P P+LLTE PLNPKANREKMTQ MFE FN PAMYVAIQAVL S VLD GD
Sbjct: 100 PEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGD 159
Query: 559 G 561
G
Sbjct: 160 G 160
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 103 bits (247), Expect = 8e-23
Identities = 42/46 (91%), Positives = 46/46 (100%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 391
+EAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEH
Sbjct: 58 DEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEH 103
Score = 93.9 bits (223), Expect = 7e-20
Identities = 40/59 (67%), Positives = 50/59 (84%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGEDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
+++ +V DNG+GM KAGFAG+DAPRAVFPS+VGRPRH GVMVGM QKD+YVG ++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
Score = 83.4 bits (197), Expect = 9e-17
Identities = 43/61 (70%), Positives = 44/61 (72%)
Frame = +1
Query: 379 PRGTPVLLTEXPLNPKANREKMTQXMFEXFNTPAMYVAIQAVLCCTRSVVPXVFVLDFGD 558
P PVLLTE PLNPKANREKMTQ MFE FN+PAMYVAIQAVL S VLD GD
Sbjct: 100 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGD 159
Query: 559 G 561
G
Sbjct: 160 G 160
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 103 bits (247), Expect = 8e-23
Identities = 42/46 (91%), Positives = 46/46 (100%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 391
+EAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEH
Sbjct: 58 DEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEH 103
Score = 93.9 bits (223), Expect = 7e-20
Identities = 40/59 (67%), Positives = 50/59 (84%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGEDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
+++ +V DNG+GM KAGFAG+DAPRAVFPS+VGRPRH GVMVGM QKD+YVG ++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
Score = 83.4 bits (197), Expect = 9e-17
Identities = 43/61 (70%), Positives = 44/61 (72%)
Frame = +1
Query: 379 PRGTPVLLTEXPLNPKANREKMTQXMFEXFNTPAMYVAIQAVLCCTRSVVPXVFVLDFGD 558
P PVLLTE PLNPKANREKMTQ MFE FN+PAMYVAIQAVL S VLD GD
Sbjct: 100 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGD 159
Query: 559 G 561
G
Sbjct: 160 G 160
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 103 bits (247), Expect = 8e-23
Identities = 42/46 (91%), Positives = 46/46 (100%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 391
+EAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEH
Sbjct: 58 DEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEH 103
Score = 93.9 bits (223), Expect = 7e-20
Identities = 40/59 (67%), Positives = 50/59 (84%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGEDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
+++ +V DNG+GM KAGFAG+DAPRAVFPS+VGRPRH GVMVGM QKD+YVG ++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
Score = 83.4 bits (197), Expect = 9e-17
Identities = 43/61 (70%), Positives = 44/61 (72%)
Frame = +1
Query: 379 PRGTPVLLTEXPLNPKANREKMTQXMFEXFNTPAMYVAIQAVLCCTRSVVPXVFVLDFGD 558
P PVLLTE PLNPKANREKMTQ MFE FN+PAMYVAIQAVL S VLD GD
Sbjct: 100 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGD 159
Query: 559 G 561
G
Sbjct: 160 G 160
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 96.7 bits (230), Expect = 9e-21
Identities = 38/46 (82%), Positives = 45/46 (97%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 391
+EAQ++RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEH
Sbjct: 59 DEAQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEH 104
Score = 92.7 bits (220), Expect = 2e-19
Identities = 40/59 (67%), Positives = 51/59 (86%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGEDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
+E A+V DNG+GM KAGFAG+DAPRAVFPS+VGRPRH+GVMVGM +KD++VG +A+
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQAR 64
Score = 73.7 bits (173), Expect = 8e-14
Identities = 37/61 (60%), Positives = 40/61 (65%)
Frame = +1
Query: 379 PRGTPVLLTEXPLNPKANREKMTQXMFEXFNTPAMYVAIQAVLCCTRSVVPXVFVLDFGD 558
P P+LLTE PLNPK NREKMTQ MFE F P+MY+ IQAVL S VLD GD
Sbjct: 101 PEEHPILLTEAPLNPKVNREKMTQIMFESFAFPSMYIGIQAVLSLYSSGRTTGIVLDSGD 160
Query: 559 G 561
G
Sbjct: 161 G 161
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 89.0 bits (211), Expect = 2e-18
Identities = 35/50 (70%), Positives = 45/50 (90%)
Frame = +2
Query: 242 LLCRNEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 391
L ++A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEH
Sbjct: 9 LFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEH 58
Score = 70.9 bits (166), Expect = 5e-13
Identities = 36/61 (59%), Positives = 40/61 (65%)
Frame = +1
Query: 379 PRGTPVLLTEXPLNPKANREKMTQXMFEXFNTPAMYVAIQAVLCCTRSVVPXVFVLDFGD 558
P PVLLTE PLNPKA+REKMTQ MFE F P+MY+ +QA L S VLD GD
Sbjct: 55 PEEHPVLLTEAPLNPKADREKMTQIMFETFAVPSMYIGMQAALSLHASGRTTGTVLDSGD 114
Query: 559 G 561
G
Sbjct: 115 G 115
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 85.0 bits (201), Expect = 3e-17
Identities = 39/59 (66%), Positives = 43/59 (72%)
Frame = +2
Query: 215 RDGRYGTEGLLCRNEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 391
RDG E + E + R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEH
Sbjct: 35 RDGLNPNESYV-GEEGHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEH 92
Score = 71.3 bits (167), Expect = 4e-13
Identities = 36/60 (60%), Positives = 41/60 (68%)
Frame = +1
Query: 379 PRGTPVLLTEXPLNPKANREKMTQXMFEXFNTPAMYVAIQAVLCCTRSVVPXVFVLDFGD 558
P PVLLTE P NPKANREKMTQ MFE F+ PAMYV++Q+VL S VLD G+
Sbjct: 89 PEEHPVLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQSVLYLYSSGRTTGVVLDLGE 148
Score = 54.8 bits (126), Expect = 4e-08
Identities = 25/48 (52%), Positives = 33/48 (68%)
Frame = +3
Query: 111 LVVDNGSGMCKAGFAGEDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG 254
+V D G GM +AGFAG++AP+ VFP +VGRPR G+ +SYVG
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVG 46
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 58.4 bits (135), Expect = 3e-09
Identities = 20/36 (55%), Positives = 27/36 (75%)
Frame = +2
Query: 281 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 388
L + YP+ +GIV NWDDME +W H FYNEL++ P +
Sbjct: 66 LDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSD 101
Score = 56.8 bits (131), Expect = 9e-09
Identities = 27/61 (44%), Positives = 36/61 (59%)
Frame = +1
Query: 379 PRGTPVLLTEXPLNPKANREKMTQXMFEXFNTPAMYVAIQAVLCCTRSVVPXVFVLDFGD 558
P +LLT+ PLNP NREKM + MFE +N +++ IQAVL + V+D GD
Sbjct: 99 PSDCKILLTDPPLNPSKNREKMIETMFEKYNFAGVFIQIQAVLTLYAQGLLTGLVIDSGD 158
Query: 559 G 561
G
Sbjct: 159 G 159
Score = 49.6 bits (113), Expect = 1e-06
Identities = 24/50 (48%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Frame = +3
Query: 111 LVVDNGSGMCKAGFAGEDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVG 254
+V DNG+G K GFAGE+ P +VFP +VGRP R++ ++ KD VG
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVG 56
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 58.4 bits (135), Expect = 3e-09
Identities = 25/34 (73%), Positives = 31/34 (91%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGEDAPRAVFPSIVG 197
+EV+A+VVD GS CKAG+AGEDAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
Score = 42.3 bits (95), Expect = 2e-04
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +2
Query: 269 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 391
+R + + P + GIVT+WD ++ +W H F N L + P EH
Sbjct: 79 RRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEH 119
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 58.0 bits (134), Expect = 4e-09
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGEDAPRAVFPSIVG 197
+EV+A+VVD GS CKAG+AGEDAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
Score = 45.2 bits (102), Expect = 3e-05
Identities = 23/61 (37%), Positives = 32/61 (52%)
Frame = +1
Query: 379 PRGTPVLLTEXPLNPKANREKMTQXMFEXFNTPAMYVAIQAVLCCTRSVVPXVFVLDFGD 558
P P+LL E PLN + REK + MFE + PA+++A VL + V+D G
Sbjct: 122 PTEHPMLLAEPPLNTQQQREKAAELMFEKYKVPALFMAKNPVLTSFATGRATSLVVDCGG 181
Query: 559 G 561
G
Sbjct: 182 G 182
Score = 40.7 bits (91), Expect = 7e-04
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +2
Query: 269 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 391
+R + + PI+ GIV++WD ++ IW H F + L + P EH
Sbjct: 85 RRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEH 125
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 51.2 bits (117), Expect = 5e-07
Identities = 20/37 (54%), Positives = 24/37 (64%)
Frame = +2
Query: 287 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHQF 397
L YPIEHG V +WD ME+ W +N LR PE+H F
Sbjct: 86 LHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYF 122
Score = 47.6 bits (108), Expect = 6e-06
Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Frame = +1
Query: 373 CRPRGTPVLLTEXPLNPKANREKMTQXMFEXFNTPAMYVAIQAVLC-----CTRSVVPXV 537
C P LLTE PL P +RE + +FE FN P +Y+A+ +VL T
Sbjct: 115 CDPEDHYFLLTESPLTPPESREYTGEILFETFNVPGLYIAVNSVLALAAGYTTSKCEMTG 174
Query: 538 FVLDFGDG 561
V+D GDG
Sbjct: 175 VVVDVGDG 182
Score = 35.5 bits (78), Expect = 0.025
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +3
Query: 108 ALVVDNGSGMCKAGFAGEDAPRAVFPSIV 194
A+V+DNG+G K GFAG P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 44.0 bits (99), Expect = 7e-05
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = +3
Query: 111 LVVDNGSGMCKAGFAGEDAPRAVFPSIVGRPRHQ 212
+V+DNG+ + G+AGE PR VF +IV RPRH+
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHK 55
Score = 36.7 bits (81), Expect = 0.011
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 391 PVLLTEXPLNPKANREKMTQXMFEXFNTPAMYVAIQA 501
P+L+TE NP +R KM + +FE + PA+ + A
Sbjct: 118 PILITECACNPVQSRSKMAELLFETYGVPAVAFGVDA 154
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +1
Query: 337 EDLASYLLQ*AACRPRGTP--VLLTEXPLNPKANREKMTQXMFEXFNTPAMYVAIQAVL 507
EDL Y++ G +L T+ PKA RE++ Q MFE FN Y + QAVL
Sbjct: 70 EDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFNVSGFYASEQAVL 128
Score = 28.7 bits (61), Expect = 2.8
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 296 PIEHGIVTNWDDMEKIWHHTFYNEL 370
PIE G++ +WD ME + + Y L
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGL 81
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.075
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -2
Query: 232 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 95
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 33.9 bits (74), Expect = 0.075
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +3
Query: 111 LVVDNGSGMCKAGFAGEDAPRAVFPSIVGRP 203
+V+DNG G+ KAG GE P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
Score = 30.7 bits (66), Expect = 0.70
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 287 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 382
++ PI+ G + N D +IW H F + L +AP
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAP 92
Score = 28.3 bits (60), Expect = 3.7
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +1
Query: 379 PRGTPVLLTEXPLNPKANREKMTQXMFEXFNTPAMYVA 492
P + +LLTE PL+ + + + +FE F ++Y+A
Sbjct: 92 PSSSSLLLTEAPLSIPSVQRTTDELVFEDFGFSSLYIA 129
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 27.9 bits (59), Expect = 5.0
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +2
Query: 281 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 382
L++KY + H I + W + +IW L+ P
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP 211
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 27.9 bits (59), Expect = 5.0
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +2
Query: 281 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 382
L++KY + H I + W + +IW L+ P
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP 211
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 6.5
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -2
Query: 208 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 86
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin
family protein / PAN domain-containing protein contains
Pfam profiles: PF01453 lectin (probable mannose
binding), PF00024 PAN domain
Length = 764
Score = 27.5 bits (58), Expect = 6.5
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGEDAPRAVFPSIVGRPRHQGVM 221
E++ A + + G G+C A ED + V I GR +GV+
Sbjct: 632 EDLEAKLTEYGFGLCAADKDVEDFGKTVLALITGRYEPEGVV 673
>At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit
(IRX3) identical to gi:5230423
Length = 1026
Score = 27.1 bits (57), Expect = 8.7
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = +3
Query: 408 GSPQPQGQQREDDPXHVRX---IQHARHVRRHPSRALLY 515
GSP+ +G + E+D + I+H + +H + A+LY
Sbjct: 91 GSPRVEGDEDEEDIDDIEYEFNIEHEQDKHKHSAEAMLY 129
>At1g71850.1 68414.m08303 expressed protein ; expression supported
by MPSS
Length = 470
Score = 27.1 bits (57), Expect = 8.7
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +2
Query: 185 LDRGKAPPSGRDGR--YGTEGLLCRNEAQSKRGILTLK 292
L+RG+ S R GR +G G R++AQS+R ++LK
Sbjct: 426 LERGRRNSSPRSGRRSFGNSG--SRDKAQSRRSKISLK 461
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,428,707
Number of Sequences: 28952
Number of extensions: 267840
Number of successful extensions: 763
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 763
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1082538160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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