Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0495
         (848 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    24   1.7  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    24   1.7  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    23   2.3  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    23   4.0  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    23   4.0  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    23   4.0  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    23   4.0  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    21   9.3  

>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = -3

Query: 267 RTSASEQFFSVPVCRVGFCQSSRKNNVGRVEAYHLPF 157
           RT + E+ F  PVC   F QSS      R  +   P+
Sbjct: 42  RTHSGEKPFRCPVCDRRFSQSSSVTTHMRTHSGERPY 78


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = -3

Query: 267 RTSASEQFFSVPVCRVGFCQSSRKNNVGRVEAYHLPF 157
           RT + E+ F  PVC   F QSS      R  +   P+
Sbjct: 298 RTHSGEKPFRCPVCDRRFSQSSSVTTHMRTHSGERPY 334


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -2

Query: 430 RQLKKWNQGERAKSLRASNRWRI 362
           RQ+K W Q  RAK  R  N+ RI
Sbjct: 199 RQIKIWFQNRRAKE-RKQNKKRI 220


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +2

Query: 305 EIPVIPKSAYDDLT 346
           E P +PK+A DDLT
Sbjct: 491 EWPQVPKNATDDLT 504


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +2

Query: 305 EIPVIPKSAYDDLT 346
           E P +PK+A DDLT
Sbjct: 491 EWPQVPKNATDDLT 504


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +2

Query: 305 EIPVIPKSAYDDLT 346
           E P +PK+A DDLT
Sbjct: 491 EWPQVPKNATDDLT 504


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +2

Query: 305 EIPVIPKSAYDDLT 346
           E P +PK+A DDLT
Sbjct: 491 EWPQVPKNATDDLT 504


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 427 QLKKWNQGERAKSLRAS 377
           Q+K W Q +RAK  +AS
Sbjct: 271 QIKIWFQNKRAKIKKAS 287


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,873
Number of Sequences: 336
Number of extensions: 4488
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23451794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)