Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0495
         (848 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_1060 - 8363272-8365912,8366375-8366443,8366479-8366843,836...    29   6.2  

>01_01_1060 - 8363272-8365912,8366375-8366443,8366479-8366843,
            8367403-8367550,8367630-8367873,8368105-8368407,
            8368639-8368851,8368927-8369002,8369533-8369561,
            8369610-8369984,8371784-8371927,8374053-8374086
          Length = 1546

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +1

Query: 364  FSTGSKPSTTWRAHLDSTFSAAAGRH 441
            +  G KP+ +WR  LD    AA G H
Sbjct: 1280 YHNGGKPTLSWRHRLDICIGAARGLH 1305


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,340,838
Number of Sequences: 37544
Number of extensions: 502594
Number of successful extensions: 1254
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1254
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2362209084
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)