Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0495
         (848 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              25   1.2  
U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor prot...    23   3.6  
AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin pr...    23   3.6  
DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              22   6.2  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              22   6.2  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    22   6.2  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    22   6.2  
M29490-1|AAA27725.1|  109|Apis mellifera protein ( Bee homeobox-...    22   8.2  
M29489-1|AAA27724.1|  109|Apis mellifera protein ( Bee homeobox-...    22   8.2  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -2

Query: 499 HAIANPSTLQTHILSFQFVRDV 434
           HA+ N   +QTH+L+   + +V
Sbjct: 383 HAVRNQDVVQTHVLTIHTIPEV 404


>U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor
           protein.
          Length = 95

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = -1

Query: 401 ARQVVEGFEPVENFAHRIL*DHHKQIS 321
           A  V + FEP+E+F +    D H++++
Sbjct: 19  AAPVEDEFEPLEHFENEERADRHRRVT 45


>AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin
           precursor protein.
          Length = 95

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = -1

Query: 401 ARQVVEGFEPVENFAHRIL*DHHKQIS 321
           A  V + FEP+E+F +    D H++++
Sbjct: 19  AAPVEDEFEPLEHFENEERADRHRRVT 45


>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 156 ETEDDKPQRVRRC 194
           + ED+KPQR   C
Sbjct: 53  DVEDEKPQRYNEC 65


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 156 ETEDDKPQRVRRC 194
           + ED+KPQR   C
Sbjct: 53  DVEDEKPQRYNEC 65


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -2

Query: 517 NHIGYVHAIANPSTLQTHILSFQFVRDVPRQ 425
           +H+ +   +  P  L  H  S QF RD+  Q
Sbjct: 312 DHVDFDEFLPPPPNLDYHDYSRQFPRDLTTQ 342


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 9/40 (22%), Positives = 20/40 (50%)
 Frame = -2

Query: 430 RQLKKWNQGERAKSLRASNRWRILHIASCEIIISRFRDYR 311
           +Q+KK    E  +     +  RI+  A C+ ++  F+ ++
Sbjct: 397 KQMKKAQIVETRQQQHIMSEKRIMGEADCDFVVKLFKTFK 436


>M29490-1|AAA27725.1|  109|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone E30. ).
          Length = 109

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 427 QLKKWNQGERAKSLRASNR 371
           Q+K W Q +RAK  +AS +
Sbjct: 63  QIKIWFQNKRAKIKKASGQ 81


>M29489-1|AAA27724.1|  109|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone E60. ).
          Length = 109

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 427 QLKKWNQGERAKSLRASNR 371
           Q+K W Q +RAK  +AS +
Sbjct: 63  QIKIWFQNKRAKIKKASGQ 81


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 236,999
Number of Sequences: 438
Number of extensions: 5399
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27309825
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)