Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0488
(582 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 25 0.72
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 23 2.9
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 23 2.9
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 23 2.9
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 23 2.9
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 23 2.9
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 22 3.8
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 22 3.8
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 22 3.8
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 22 3.8
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 22 3.8
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 22 5.1
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 21 8.9
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 21 8.9
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 24.6 bits (51), Expect = 0.72
Identities = 11/35 (31%), Positives = 15/35 (42%)
Frame = +1
Query: 166 NYYCCNFIKQSAPGSK*EYSNNNYPNICMRKNILC 270
N + CN PG + S YP I N++C
Sbjct: 680 NPFNCNCSMDWLPGINNQTSTREYPRIMDLDNVMC 714
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.6 bits (46), Expect = 2.9
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +1
Query: 220 YSNNNYPNICMRKNIL 267
Y+NNNY +C N +
Sbjct: 94 YNNNNYKQLCYNINYI 109
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.6 bits (46), Expect = 2.9
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +1
Query: 220 YSNNNYPNICMRKNIL 267
Y+NNNY +C N +
Sbjct: 94 YNNNNYKQLCYNINYI 109
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.6 bits (46), Expect = 2.9
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +1
Query: 220 YSNNNYPNICMRKNIL 267
Y+NNNY +C N +
Sbjct: 94 YNNNNYKQLCYNINYI 109
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.6 bits (46), Expect = 2.9
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +1
Query: 220 YSNNNYPNICMRKNIL 267
Y+NNNY +C N +
Sbjct: 94 YNNNNYKQLCYNINYI 109
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.6 bits (46), Expect = 2.9
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +1
Query: 220 YSNNNYPNICMRKNIL 267
Y+NNNY +C N +
Sbjct: 94 YNNNNYKQLCYNINYI 109
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 3.8
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = +1
Query: 220 YSNNNYPNICMRKN 261
Y+NNNY +C N
Sbjct: 94 YNNNNYKQLCYNIN 107
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 22.2 bits (45), Expect = 3.8
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 211 K*EYSNNNYPNICMR 255
K Y+NNNY N C +
Sbjct: 97 KYNYNNNNYNNNCKK 111
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.2 bits (45), Expect = 3.8
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 211 K*EYSNNNYPNICMR 255
K Y+NNNY N C +
Sbjct: 97 KYNYNNNNYNNNCKK 111
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.2 bits (45), Expect = 3.8
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 211 K*EYSNNNYPNICMR 255
K Y+NNNY N C +
Sbjct: 97 KYNYNNNNYNNNCKK 111
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.2 bits (45), Expect = 3.8
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 211 K*EYSNNNYPNICMR 255
K Y+NNNY N C +
Sbjct: 97 KYNYNNNNYNNNCKK 111
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 21.8 bits (44), Expect = 5.1
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -2
Query: 116 IYRSEMTRPVVRVNPKFL 63
IYR + T P+ +VN K++
Sbjct: 318 IYRRKKTVPLKKVNSKYI 335
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 21.0 bits (42), Expect = 8.9
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = -2
Query: 446 KFHLQHYNSDMLENFVLNKKKFYFVKLLIYF 354
K H + YN D + L + F KL+ YF
Sbjct: 433 KMHQKPYNKDEIIYPNLKIESFTVDKLITYF 463
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 21.0 bits (42), Expect = 8.9
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = -2
Query: 446 KFHLQHYNSDMLENFVLNKKKFYFVKLLIYF 354
K H + YN D + L + F KL+ YF
Sbjct: 433 KMHQKPYNKDEIIYPNLKIESFTVDKLITYF 463
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,149
Number of Sequences: 438
Number of extensions: 3159
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16870914
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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