Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0485
(419 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q06477 Cluster: IFN-response element binding factor 2; ... 121 5e-27
UniRef50_Q8C671 Cluster: 0 day neonate head cDNA, RIKEN full-len... 90 1e-17
UniRef50_Q6NXQ0 Cluster: SFRS2 protein; n=4; Homo/Pan/Gorilla gr... 90 1e-17
UniRef50_Q9BRL6 Cluster: Splicing factor, arginine/serine-rich 2... 85 6e-16
UniRef50_Q09511 Cluster: Probable splicing factor, arginine/seri... 71 1e-11
UniRef50_UPI00005C16F5 Cluster: PREDICTED: similar to Sfrs2-prov... 59 4e-08
UniRef50_Q018R2 Cluster: RSP4_CAEEL Probable splicing factor, ar... 58 1e-07
UniRef50_A4RXT9 Cluster: Predicted protein; n=1; Ostreococcus lu... 57 2e-07
UniRef50_A7QII5 Cluster: Chromosome chr12 scaffold_103, whole ge... 51 8e-06
UniRef50_Q9FMG4 Cluster: Similarity to splicing factor; n=6; Mag... 51 1e-05
UniRef50_UPI0000DBF0C6 Cluster: UPI0000DBF0C6 related cluster; n... 48 6e-05
UniRef50_A2APT2 Cluster: Novel protein; n=3; Murinae|Rep: Novel ... 48 6e-05
UniRef50_Q8II95 Cluster: Putative uncharacterized protein; n=1; ... 44 0.002
UniRef50_A7ARN5 Cluster: Ser/Arg-rich splicing factor, putative;... 43 0.002
UniRef50_Q9FYA9 Cluster: SC35-like splicing factor SCL30, 30 kD;... 42 0.007
UniRef50_Q7RMQ4 Cluster: Dentin phosphoryn; n=5; Plasmodium (Vin... 42 0.007
UniRef50_A5K4S8 Cluster: Putative uncharacterized protein; n=1; ... 42 0.007
UniRef50_UPI0000D55448 Cluster: PREDICTED: similar to Splicing f... 41 0.012
UniRef50_Q8DIY8 Cluster: RNA binding protein; n=3; Cyanobacteria... 41 0.012
UniRef50_Q6C747 Cluster: Yarrowia lipolytica chromosome E of str... 40 0.016
UniRef50_Q9SEU4 Cluster: Serine/arginine-rich protein; n=22; Euk... 40 0.021
UniRef50_Q8WXF0 Cluster: 35 kDa SR repressor protein; n=18; Eute... 40 0.021
UniRef50_Q8MYR4 Cluster: SD14970p; n=2; Drosophila melanogaster|... 39 0.036
UniRef50_Q23QD3 Cluster: Polyadenylate-binding protein 2; n=1; T... 39 0.036
UniRef50_Q2QNB0 Cluster: RNA recognition motif family protein, e... 39 0.047
UniRef50_A7CQC8 Cluster: RNP-1 like RNA-binding protein; n=1; Op... 38 0.083
UniRef50_A7AN88 Cluster: RNA recognition motif domain containing... 38 0.083
UniRef50_Q9P4V6 Cluster: RNA-binding protein; n=3; Saccharomycet... 38 0.083
UniRef50_UPI0000DB7622 Cluster: PREDICTED: similar to CG3335-PA;... 38 0.11
UniRef50_Q1PES4 Cluster: RNA recognition motif-containing protei... 38 0.11
UniRef50_A7P058 Cluster: Chromosome chr6 scaffold_3, whole genom... 38 0.11
UniRef50_Q9WX39 Cluster: Putative RNA-binding protein rbpF; n=10... 38 0.11
UniRef50_Q5CF61 Cluster: Dentin phosphoryn; n=2; Cryptosporidium... 37 0.14
UniRef50_O75821 Cluster: Eukaryotic translation initiation facto... 37 0.14
UniRef50_A4RWB3 Cluster: Predicted protein; n=2; Ostreococcus|Re... 37 0.19
UniRef50_Q54PB2 Cluster: RNA-binding region-containing protein; ... 37 0.19
UniRef50_A7AT82 Cluster: RNA recognition motif containing protei... 37 0.19
UniRef50_Q4P7G1 Cluster: Putative uncharacterized protein; n=1; ... 37 0.19
UniRef50_Q8WXF1 Cluster: Paraspeckle component 1; n=27; Euteleos... 37 0.19
UniRef50_P41891 Cluster: Protein gar2; n=12; Ascomycota|Rep: Pro... 37 0.19
UniRef50_Q9FIU6 Cluster: Similarity to RNA-binding protein; n=4;... 36 0.25
UniRef50_Q1PDV2 Cluster: 28 kDa SC35-like splicing factor; n=9; ... 36 0.25
UniRef50_A2YR27 Cluster: Putative uncharacterized protein; n=3; ... 36 0.25
UniRef50_A5DDT0 Cluster: Putative uncharacterized protein; n=1; ... 36 0.25
UniRef50_UPI0000498562 Cluster: RNA-binding protein; n=1; Entamo... 36 0.33
UniRef50_A0KJ75 Cluster: RNA-binding protein; n=5; Bacteria|Rep:... 36 0.33
UniRef50_Q75EU7 Cluster: AAL018Wp; n=2; Eremothecium gossypii|Re... 36 0.33
UniRef50_Q2H622 Cluster: Putative uncharacterized protein; n=1; ... 36 0.33
UniRef50_P73557 Cluster: RNA-binding protein; n=2; Chroococcales... 36 0.44
UniRef50_Q57YP5 Cluster: RNA-binding protein, putative; n=1; Try... 36 0.44
UniRef50_Q4UI71 Cluster: RNA-binding (SR) protein, putative; n=2... 36 0.44
UniRef50_Q4UFE0 Cluster: Nucleolar, RNA-binding protein, putativ... 36 0.44
UniRef50_Q44554 Cluster: Putative RNA-binding protein rbpB; n=41... 36 0.44
UniRef50_O75494 Cluster: FUS-interacting serine-arginine-rich pr... 36 0.44
UniRef50_UPI000023E598 Cluster: hypothetical protein FG10156.1; ... 35 0.58
UniRef50_Q3J7I0 Cluster: RNA-binding protein, RNP-1; n=1; Nitros... 35 0.58
UniRef50_Q9ZVW9 Cluster: Putative splicing factor; n=3; Arabidop... 35 0.58
UniRef50_Q4U9S0 Cluster: RNA-binding protein, putative; n=2; The... 35 0.58
UniRef50_UPI00015B633B Cluster: PREDICTED: similar to conserved ... 35 0.77
UniRef50_A4S763 Cluster: Predicted protein; n=1; Ostreococcus lu... 35 0.77
UniRef50_Q8IIT2 Cluster: Nucleic acid binding factor, putative; ... 35 0.77
UniRef50_A0DWV5 Cluster: Chromosome undetermined scaffold_67, wh... 35 0.77
UniRef50_Q94AC3 Cluster: AT4g36960/C7A10_400; n=11; Magnoliophyt... 34 1.3
UniRef50_Q6AWW6 Cluster: At2g47310; n=2; Arabidopsis thaliana|Re... 34 1.3
UniRef50_O23189 Cluster: RNA-binding like protein; n=1; Arabidop... 34 1.3
UniRef50_Q2GTP8 Cluster: Putative uncharacterized protein; n=1; ... 34 1.3
UniRef50_A3LV94 Cluster: U4/U6 snRNA-associated splicing factor;... 34 1.3
UniRef50_UPI0000E47947 Cluster: PREDICTED: similar to GA10247-PA... 33 1.8
UniRef50_Q8W2K5 Cluster: Phragmoplastin-interacting protein PHIP... 33 1.8
UniRef50_Q5CWK5 Cluster: 5x RRM. Mrd1p like, splicing related; n... 33 1.8
UniRef50_A7RXA3 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 33 1.8
UniRef50_Q4PBU3 Cluster: Putative uncharacterized protein; n=1; ... 33 1.8
UniRef50_O94432 Cluster: mRNA cleavage factor complex subunit; n... 33 1.8
UniRef50_A0WC53 Cluster: RNA-binding region RNP-1; n=2; Desulfur... 33 2.4
UniRef50_Q2A9J1 Cluster: Ulp1 protease family protein; n=2; Bras... 33 2.4
UniRef50_Q4H2Q6 Cluster: Ci-Tardbp protein; n=1; Ciona intestina... 33 2.4
UniRef50_Q9Y7Y3 Cluster: RNA-binding protein; n=1; Schizosacchar... 33 2.4
UniRef50_Q9C222 Cluster: Putative uncharacterized protein B8L3.0... 33 2.4
UniRef50_Q57014 Cluster: Putative RNA-binding protein rbpA; n=70... 33 2.4
UniRef50_P38922 Cluster: Protein HRB1; n=6; Saccharomycetales|Re... 33 2.4
UniRef50_Q98A79 Cluster: Carbohydrate kinase; n=1; Mesorhizobium... 33 3.1
UniRef50_Q39SC4 Cluster: RNA-binding region RNP-1; n=2; Geobacte... 33 3.1
UniRef50_Q8ILQ0 Cluster: Spliceosome-associated protein, putativ... 33 3.1
UniRef50_Q5CWM4 Cluster: U2 snRNP. Hsh49p, RRM domain containing... 33 3.1
UniRef50_Q4MZK1 Cluster: Nucleic acid binding factor, putative; ... 33 3.1
UniRef50_A5KAW4 Cluster: Ser/Arg-rich splicing factor, putative;... 33 3.1
UniRef50_A5K494 Cluster: Nucleic acid binding factor, putative; ... 33 3.1
UniRef50_A2EQG8 Cluster: Putative uncharacterized protein; n=1; ... 33 3.1
UniRef50_A2EJG8 Cluster: Putative uncharacterized protein; n=1; ... 33 3.1
UniRef50_Q6FS32 Cluster: Similar to sp|P38922 Saccharomyces cere... 33 3.1
UniRef50_Q0TVC9 Cluster: Putative uncharacterized protein; n=1; ... 33 3.1
UniRef50_Q44560 Cluster: Putative RNA-binding protein rbpA; n=4;... 33 3.1
UniRef50_UPI000155BFA0 Cluster: PREDICTED: similar to FUSIP1 pro... 32 4.1
UniRef50_UPI000023C9E8 Cluster: hypothetical protein FG01088.1; ... 32 4.1
UniRef50_Q569S7 Cluster: LOC443584 protein; n=5; Xenopus|Rep: LO... 32 4.1
UniRef50_Q57W18 Cluster: RNA-binding protein, putative; n=1; Try... 32 4.1
UniRef50_Q3HM26 Cluster: Sex-lethal isoform 1; n=4; Bombyx mori|... 32 4.1
UniRef50_A0EH21 Cluster: Chromosome undetermined scaffold_96, wh... 32 4.1
UniRef50_A0DJK7 Cluster: Chromosome undetermined scaffold_53, wh... 32 4.1
UniRef50_Q5K911 Cluster: Telomere maintenance protein, putative;... 32 4.1
UniRef50_UPI00015B5DA3 Cluster: PREDICTED: similar to CG3335-PA;... 32 5.4
UniRef50_UPI0001560A8A Cluster: PREDICTED: hypothetical protein;... 32 5.4
UniRef50_UPI0000DB6CD5 Cluster: PREDICTED: similar to no on or o... 32 5.4
UniRef50_UPI000058483A Cluster: PREDICTED: hypothetical protein;... 32 5.4
UniRef50_UPI000051A8B9 Cluster: PREDICTED: similar to CG1316-PA;... 32 5.4
UniRef50_Q4SJ02 Cluster: Chromosome 21 SCAF14577, whole genome s... 32 5.4
UniRef50_Q02AB7 Cluster: RNP-1 like RNA-binding protein; n=2; ce... 32 5.4
UniRef50_Q9M9E6 Cluster: F3F9.20; n=8; Arabidopsis thaliana|Rep:... 32 5.4
UniRef50_Q9LU62 Cluster: Similarity to poly(A)-binding protein I... 32 5.4
UniRef50_Q8GU29 Cluster: Glycin-rich RNA binding protein; n=6; c... 32 5.4
UniRef50_A4RUB8 Cluster: Predicted protein; n=2; Ostreococcus|Re... 32 5.4
UniRef50_Q6UDW5 Cluster: Erythrocyte membrane protein 1; n=5; Pl... 32 5.4
UniRef50_Q5CX28 Cluster: RRM domain containing protein; T22E16.1... 32 5.4
UniRef50_Q5CRV5 Cluster: SPAC25G10.01-like RRM domain containing... 32 5.4
UniRef50_Q17GF4 Cluster: Putative uncharacterized protein; n=1; ... 32 5.4
UniRef50_Q5VVE2 Cluster: SMART/HDAC1 associated repressor protei... 32 5.4
UniRef50_Q2UQ21 Cluster: Predicted protein; n=3; Pezizomycotina|... 32 5.4
UniRef50_A1C5R1 Cluster: Putative uncharacterized protein; n=1; ... 32 5.4
UniRef50_O14327 Cluster: Polyadenylate-binding protein 2 (Poly(A... 32 5.4
UniRef50_Q96T58 Cluster: Msx2-interacting protein; n=14; Eutheri... 32 5.4
UniRef50_UPI00015B6013 Cluster: PREDICTED: similar to GA12086-PA... 31 7.2
UniRef50_UPI0000E49D83 Cluster: PREDICTED: hypothetical protein;... 31 7.2
UniRef50_Q74DJ2 Cluster: RNA-binding protein; n=2; Geobacter|Rep... 31 7.2
UniRef50_Q9SJT4 Cluster: Expressed protein; n=1; Arabidopsis tha... 31 7.2
UniRef50_A3AAN7 Cluster: Putative uncharacterized protein; n=2; ... 31 7.2
UniRef50_Q9W108 Cluster: CG3594-PA; n=3; Sophophora|Rep: CG3594-... 31 7.2
UniRef50_Q76P06 Cluster: Putative uncharacterized protein; n=2; ... 31 7.2
UniRef50_Q5TTQ2 Cluster: ENSANGP00000026814; n=3; Endopterygota|... 31 7.2
UniRef50_Q17DU7 Cluster: RNA binding motif protein; n=3; Culicid... 31 7.2
UniRef50_A7RU25 Cluster: Predicted protein; n=1; Nematostella ve... 31 7.2
UniRef50_A2EWD1 Cluster: Putative uncharacterized protein; n=1; ... 31 7.2
UniRef50_Q8SSA1 Cluster: NUCLEOLAR PROTEIN OF THE GAR FAMILY; n=... 31 7.2
UniRef50_A7ED15 Cluster: Putative uncharacterized protein; n=1; ... 31 7.2
UniRef50_Q9BX46 Cluster: RNA-binding protein 24; n=52; Eumetazoa... 31 7.2
UniRef50_Q1DXH0 Cluster: Polyadenylate-binding protein, cytoplas... 31 7.2
UniRef50_Q96EP5 Cluster: DAZ-associated protein 1; n=39; Euteleo... 31 7.2
UniRef50_Q4SEZ3 Cluster: Chromosome 1 SCAF14609, whole genome sh... 31 9.5
UniRef50_Q6NPL0 Cluster: At4g09040; n=6; Arabidopsis thaliana|Re... 31 9.5
UniRef50_A7PXT7 Cluster: Chromosome chr15 scaffold_37, whole gen... 31 9.5
UniRef50_Q8I2R8 Cluster: RNA-binding protein, putative; n=5; Pla... 31 9.5
UniRef50_Q5BXS3 Cluster: SJCHGC01369 protein; n=2; Schistosoma j... 31 9.5
UniRef50_Q23RL2 Cluster: Nucleolar phosphoprotein, putative; n=2... 31 9.5
UniRef50_A7RLV0 Cluster: Predicted protein; n=1; Nematostella ve... 31 9.5
UniRef50_A7APZ7 Cluster: Putative uncharacterized protein; n=1; ... 31 9.5
UniRef50_A4V6N1 Cluster: HnRNP A2/B1 protein; n=1; Dugesia japon... 31 9.5
UniRef50_A0BZZ4 Cluster: Chromosome undetermined scaffold_14, wh... 31 9.5
UniRef50_Q96V40 Cluster: Peptidyl-prolyl cis-trans isomerase; n=... 31 9.5
UniRef50_Q7S1F3 Cluster: Predicted protein; n=4; Pezizomycotina|... 31 9.5
UniRef50_Q5KLP3 Cluster: Poly(A) binding protein, putative; n=1;... 31 9.5
UniRef50_Q03251 Cluster: Glycine-rich RNA-binding protein 8; n=7... 31 9.5
UniRef50_P25555 Cluster: Single-strand telomeric DNA-binding pro... 31 9.5
>UniRef50_Q06477 Cluster: IFN-response element binding factor 2;
n=3; Murinae|Rep: IFN-response element binding factor 2
- Mus musculus (Mouse)
Length = 277
Score = 121 bits (292), Expect = 5e-27
Identities = 57/100 (57%), Positives = 68/100 (68%), Gaps = 1/100 (1%)
Frame = +3
Query: 108 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGKVEDSPS* 287
MSYGRPPP ++GM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDR + S
Sbjct: 47 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFASS 106
Query: 288 GFSSVVTLKKPWTRWTDECWTAGNFAXRWRDMVA-PHRHT 404
G ++ T K PWT WT C TA ++ RWR A P R T
Sbjct: 107 GSTTSATPKTPWTPWTGRCSTAASYGCRWRATAARPTRTT 146
>UniRef50_Q8C671 Cluster: 0 day neonate head cDNA, RIKEN full-length
enriched library, clone:4833401I21 product:splicing
factor, arginine/serine-rich 2 (SC- 35), full insert
sequence; n=7; Mammalia|Rep: 0 day neonate head cDNA,
RIKEN full-length enriched library, clone:4833401I21
product:splicing factor, arginine/serine-rich 2 (SC-
35), full insert sequence - Mus musculus (Mouse)
Length = 254
Score = 90.2 bits (214), Expect = 1e-17
Identities = 38/49 (77%), Positives = 44/49 (89%)
Frame = +3
Query: 108 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDR 254
MSYGRPPP ++GM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDR
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDR 49
Score = 33.5 bits (73), Expect = 1.8
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2
Query: 320 LDTMDGRMLDGRELRXQMA 376
+D MDG +LDGRELR QMA
Sbjct: 72 MDAMDGAVLDGRELRVQMA 90
>UniRef50_Q6NXQ0 Cluster: SFRS2 protein; n=4; Homo/Pan/Gorilla
group|Rep: SFRS2 protein - Homo sapiens (Human)
Length = 179
Score = 90.2 bits (214), Expect = 1e-17
Identities = 38/49 (77%), Positives = 44/49 (89%)
Frame = +3
Query: 108 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDR 254
MSYGRPPP ++GM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDR
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDR 49
>UniRef50_Q9BRL6 Cluster: Splicing factor, arginine/serine-rich 2B;
n=41; Eumetazoa|Rep: Splicing factor,
arginine/serine-rich 2B - Homo sapiens (Human)
Length = 282
Score = 85.0 bits (201), Expect = 6e-16
Identities = 35/48 (72%), Positives = 43/48 (89%)
Frame = +3
Query: 108 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251
MS GRPPP +DGM++LKVDNLTYRT+P+ LRRVFE+ G VGD+YIPR+
Sbjct: 1 MSCGRPPPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPRE 48
>UniRef50_Q09511 Cluster: Probable splicing factor,
arginine/serine-rich 4; n=10; Bilateria|Rep: Probable
splicing factor, arginine/serine-rich 4 - Caenorhabditis
elegans
Length = 196
Score = 70.5 bits (165), Expect = 1e-11
Identities = 28/45 (62%), Positives = 38/45 (84%)
Frame = +3
Query: 120 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDR 254
R P I+G+ SLK+DNL+Y+TTP DLRR FER G++GD++IPRD+
Sbjct: 10 RAAPDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDK 54
>UniRef50_UPI00005C16F5 Cluster: PREDICTED: similar to Sfrs2-prov
protein; n=4; Bos taurus|Rep: PREDICTED: similar to
Sfrs2-prov protein - Bos taurus
Length = 194
Score = 58.8 bits (136), Expect = 4e-08
Identities = 25/49 (51%), Positives = 34/49 (69%)
Frame = +3
Query: 108 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDR 254
M+Y RPPP + ++SLKVDNLT + LR +FE+ G + D+YI RDR
Sbjct: 1 MNYSRPPPNVGDLISLKVDNLTDPISHSTLRCIFEKYGPISDVYILRDR 49
>UniRef50_Q018R2 Cluster: RSP4_CAEEL Probable splicing factor,
arginine/serine-rich 4; n=1; Ostreococcus tauri|Rep:
RSP4_CAEEL Probable splicing factor,
arginine/serine-rich 4 - Ostreococcus tauri
Length = 100
Score = 57.6 bits (133), Expect = 1e-07
Identities = 23/45 (51%), Positives = 32/45 (71%)
Frame = +3
Query: 120 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDR 254
R P ++ +VS+K+DNL+Y EDLR F R GE+GD+Y+P DR
Sbjct: 43 RERPDVNDLVSVKIDNLSYDAREEDLREAFSRYGEIGDVYVPLDR 87
>UniRef50_A4RXT9 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 98
Score = 56.8 bits (131), Expect = 2e-07
Identities = 22/42 (52%), Positives = 32/42 (76%)
Frame = +3
Query: 129 PRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDR 254
P I +VS+K+DN++Y EDLR FE+ G+VGD+YIP++R
Sbjct: 1 PDISNLVSVKIDNVSYELREEDLREAFEKFGDVGDVYIPKER 42
>UniRef50_A7QII5 Cluster: Chromosome chr12 scaffold_103, whole
genome shotgun sequence; n=11; Magnoliophyta|Rep:
Chromosome chr12 scaffold_103, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 284
Score = 51.2 bits (117), Expect = 8e-06
Identities = 26/52 (50%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Frame = +3
Query: 114 YGRP-PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
+GR PP I SL V N+T+RTT +DL F++ G+V DI+IPRDR G+
Sbjct: 4 FGRSGPPDIKDTFSLLVLNITFRTTADDLFPFFDKYGKVVDIFIPRDRRTGE 55
>UniRef50_Q9FMG4 Cluster: Similarity to splicing factor; n=6;
Magnoliophyta|Rep: Similarity to splicing factor -
Arabidopsis thaliana (Mouse-ear cress)
Length = 303
Score = 50.8 bits (116), Expect = 1e-05
Identities = 25/51 (49%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Frame = +3
Query: 114 YGRP-PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQG 263
+GR PP I SL V N+T+RTT +DL +F + G+V D++IPRDR G
Sbjct: 4 FGRSGPPDISDTYSLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTG 54
>UniRef50_UPI0000DBF0C6 Cluster: UPI0000DBF0C6 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBF0C6 UniRef100 entry -
Rattus norvegicus
Length = 197
Score = 48.4 bits (110), Expect = 6e-05
Identities = 19/39 (48%), Positives = 28/39 (71%)
Frame = +3
Query: 135 IDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251
+DGM LKV+NL Y T+ L+ +FE G VGD+++PR+
Sbjct: 10 VDGMTCLKVENLAYHTSSYTLKLIFEDYGAVGDVFVPRN 48
>UniRef50_A2APT2 Cluster: Novel protein; n=3; Murinae|Rep: Novel
protein - Mus musculus (Mouse)
Length = 829
Score = 48.4 bits (110), Expect = 6e-05
Identities = 20/39 (51%), Positives = 28/39 (71%)
Frame = +3
Query: 135 IDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251
+DGM LKV+NL + T+ L+ VFE G +GD+YIPR+
Sbjct: 10 VDGMTCLKVENLAHHTSSYTLKHVFEDYGPLGDVYIPRN 48
>UniRef50_Q8II95 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 914
Score = 43.6 bits (98), Expect = 0.002
Identities = 16/39 (41%), Positives = 27/39 (69%)
Frame = +3
Query: 135 IDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251
+D S+ + NL Y T+P+ +R++FE G+V D+Y+P D
Sbjct: 2 VDSGCSILIRNLNYDTSPDKVRKIFENVGKVKDVYLPLD 40
>UniRef50_A7ARN5 Cluster: Ser/Arg-rich splicing factor, putative;
n=1; Babesia bovis|Rep: Ser/Arg-rich splicing factor,
putative - Babesia bovis
Length = 188
Score = 43.2 bits (97), Expect = 0.002
Identities = 18/34 (52%), Positives = 23/34 (67%)
Frame = +3
Query: 150 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251
SL V NL Y T+P+ LR F R GE+ D+Y+P D
Sbjct: 13 SLLVRNLKYETSPDQLRAAFSRFGEIRDVYLPLD 46
>UniRef50_Q9FYA9 Cluster: SC35-like splicing factor SCL30, 30 kD;
n=10; Magnoliophyta|Rep: SC35-like splicing factor
SCL30, 30 kD - Arabidopsis thaliana (Mouse-ear cress)
Length = 262
Score = 41.5 bits (93), Expect = 0.007
Identities = 20/39 (51%), Positives = 24/39 (61%)
Frame = +3
Query: 150 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
SL V N+ PE+LR FER G V D+YIPRD G+
Sbjct: 48 SLLVRNIPLDCRPEELREPFERFGPVRDVYIPRDYYSGQ 86
>UniRef50_Q7RMQ4 Cluster: Dentin phosphoryn; n=5; Plasmodium
(Vinckeia)|Rep: Dentin phosphoryn - Plasmodium yoelii
yoelii
Length = 793
Score = 41.5 bits (93), Expect = 0.007
Identities = 14/39 (35%), Positives = 28/39 (71%)
Frame = +3
Query: 135 IDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251
++ SL + NL++ T+P+ +R++FE G++ D+Y+P D
Sbjct: 2 VENGCSLLIRNLSFETSPDKVRKIFEHFGKIRDVYLPLD 40
>UniRef50_A5K4S8 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 1057
Score = 41.5 bits (93), Expect = 0.007
Identities = 14/39 (35%), Positives = 27/39 (69%)
Frame = +3
Query: 135 IDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251
++ SL + NL++ T+PE +R++F+ G + D+Y+P D
Sbjct: 2 VENGCSLLIKNLSFHTSPEKIRKIFQSFGRIRDVYLPLD 40
>UniRef50_UPI0000D55448 Cluster: PREDICTED: similar to Splicing
factor, arginine/serine-rich 2 (Splicing factor SC35)
(SC-35) (Splicing component, 35 kDa); n=1; Tribolium
castaneum|Rep: PREDICTED: similar to Splicing factor,
arginine/serine-rich 2 (Splicing factor SC35) (SC-35)
(Splicing component, 35 kDa) - Tribolium castaneum
Length = 231
Score = 40.7 bits (91), Expect = 0.012
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +3
Query: 150 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDR 254
++K+ NL Y+ EDL+++F G + DIY+PR R
Sbjct: 132 TVKITNLNYKIDEEDLKKIFSGIGPIADIYVPRLR 166
>UniRef50_Q8DIY8 Cluster: RNA binding protein; n=3;
Cyanobacteria|Rep: RNA binding protein - Synechococcus
elongatus (Thermosynechococcus elongatus)
Length = 90
Score = 40.7 bits (91), Expect = 0.012
Identities = 18/40 (45%), Positives = 25/40 (62%)
Frame = +3
Query: 147 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
++L + NL+Y T DLR VFE+ G + I +P DR GK
Sbjct: 1 MTLYIGNLSYEATENDLREVFEKYGAIRRIVLPVDRETGK 40
>UniRef50_Q6C747 Cluster: Yarrowia lipolytica chromosome E of strain
CLIB 122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome E of
strain CLIB 122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 294
Score = 40.3 bits (90), Expect = 0.016
Identities = 16/43 (37%), Positives = 28/43 (65%)
Frame = +3
Query: 138 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
D ++L+V NL+ T +DLRR+F + G + +Y+ +DR G+
Sbjct: 211 DDELTLRVTNLSEEATDDDLRRMFGKYGMINRVYVAKDRDTGR 253
>UniRef50_Q9SEU4 Cluster: Serine/arginine-rich protein; n=22;
Eukaryota|Rep: Serine/arginine-rich protein -
Arabidopsis thaliana (Mouse-ear cress)
Length = 287
Score = 39.9 bits (89), Expect = 0.021
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +3
Query: 150 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQG 263
SL V NL + EDLR+ FE+ G V DIY+PRD G
Sbjct: 37 SLLVRNLRHDCRQEDLRKSFEQFGPVKDIYLPRDYYTG 74
>UniRef50_Q8WXF0 Cluster: 35 kDa SR repressor protein; n=18;
Euteleostomi|Rep: 35 kDa SR repressor protein - Homo
sapiens (Human)
Length = 261
Score = 39.9 bits (89), Expect = 0.021
Identities = 22/46 (47%), Positives = 26/46 (56%)
Frame = +3
Query: 114 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251
Y RPP SL + N+ T PEDLRR F R G + D+YIP D
Sbjct: 4 YTRPPN-----TSLFIRNVADATRPEDLRREFGRYGPIVDVYIPLD 44
>UniRef50_Q8MYR4 Cluster: SD14970p; n=2; Drosophila
melanogaster|Rep: SD14970p - Drosophila melanogaster
(Fruit fly)
Length = 918
Score = 39.1 bits (87), Expect = 0.036
Identities = 16/36 (44%), Positives = 25/36 (69%)
Frame = +3
Query: 165 NLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGKVE 272
NL Y TT EDLR++FE+ G V ++ +P D+ K++
Sbjct: 370 NLAYTTTEEDLRKLFEQFGPVVEVNLPLDKLTRKIK 405
>UniRef50_Q23QD3 Cluster: Polyadenylate-binding protein 2; n=1;
Tetrahymena thermophila SB210|Rep: Polyadenylate-binding
protein 2 - Tetrahymena thermophila SB210
Length = 180
Score = 39.1 bits (87), Expect = 0.036
Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Frame = +3
Query: 150 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRT-QGK 266
S+ V N+ Y TT E+L +F+ CGE+ I IP+ R QGK
Sbjct: 60 SIFVQNVEYNTTKEELMDIFKDCGEIEKITIPQTRQGQGK 99
>UniRef50_Q2QNB0 Cluster: RNA recognition motif family protein,
expressed; n=3; Magnoliophyta|Rep: RNA recognition motif
family protein, expressed - Oryza sativa subsp. japonica
(Rice)
Length = 263
Score = 38.7 bits (86), Expect = 0.047
Identities = 24/57 (42%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Frame = +3
Query: 117 GRPPPRI-------DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
GR PPR G SL V N+ EDLR FER G V D+Y+P+D G+
Sbjct: 20 GRSPPRRGYGGRREQGSGSLLVRNIPLSCRGEDLRVPFERFGPVRDVYLPKDYYSGE 76
>UniRef50_A7CQC8 Cluster: RNP-1 like RNA-binding protein; n=1;
Opitutaceae bacterium TAV2|Rep: RNP-1 like RNA-binding
protein - Opitutaceae bacterium TAV2
Length = 106
Score = 37.9 bits (84), Expect = 0.083
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 153 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
L V NL++ T+ DLR F CG + D+++ DR G+
Sbjct: 5 LYVGNLSFNTSEADLRTAFSTCGTLTDVFLATDRETGR 42
>UniRef50_A7AN88 Cluster: RNA recognition motif domain containing
protein; n=1; Babesia bovis|Rep: RNA recognition motif
domain containing protein - Babesia bovis
Length = 643
Score = 37.9 bits (84), Expect = 0.083
Identities = 19/47 (40%), Positives = 25/47 (53%)
Frame = +3
Query: 159 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGKVEDSPS*GFSS 299
+ NL+Y TT E +R +F CGEV IP+ GK GF+S
Sbjct: 481 IRNLSYNTTEETMRELFSECGEVIRCVIPKFEENGKSMGRCFIGFTS 527
>UniRef50_Q9P4V6 Cluster: RNA-binding protein; n=3;
Saccharomycetales|Rep: RNA-binding protein - Candida
boidinii (Yeast)
Length = 255
Score = 37.9 bits (84), Expect = 0.083
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +3
Query: 150 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQG 263
S+ + NL Y TP++L++ FE CG + I IP ++ G
Sbjct: 125 SVYIGNLDYAATPDELQKHFESCGSINRITIPTNKFTG 162
>UniRef50_UPI0000DB7622 Cluster: PREDICTED: similar to CG3335-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to CG3335-PA
- Apis mellifera
Length = 816
Score = 37.5 bits (83), Expect = 0.11
Identities = 14/38 (36%), Positives = 27/38 (71%)
Frame = +3
Query: 159 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGKVE 272
+ NL+Y TT +D+R++FE+ G + ++ +P DR K++
Sbjct: 306 IRNLSYTTTEDDIRKLFEKYGPLTEVNLPIDRITRKLK 343
>UniRef50_Q1PES4 Cluster: RNA recognition motif-containing protein;
n=2; Arabidopsis thaliana|Rep: RNA recognition
motif-containing protein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 317
Score = 37.5 bits (83), Expect = 0.11
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +3
Query: 159 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
V NLT+RTT +DLRR FE+ G+V D + + G+
Sbjct: 16 VGNLTWRTTADDLRRYFEQFGQVVDANVVSETYPGR 51
>UniRef50_A7P058 Cluster: Chromosome chr6 scaffold_3, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr6 scaffold_3, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 272
Score = 37.5 bits (83), Expect = 0.11
Identities = 22/50 (44%), Positives = 26/50 (52%)
Frame = +3
Query: 114 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQG 263
YG D SL V NL + EDLRR F + G + DIY+PRD G
Sbjct: 27 YGGRGSARDLPTSLLVRNLRHDCRGEDLRRPFGQFGPLKDIYLPRDYYTG 76
>UniRef50_Q9WX39 Cluster: Putative RNA-binding protein rbpF; n=10;
Bacteria|Rep: Putative RNA-binding protein rbpF -
Anabaena sp. (strain PCC 7120)
Length = 105
Score = 37.5 bits (83), Expect = 0.11
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +3
Query: 147 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGKV 269
+S+ V NL+Y T ED+ VF G V + +P DR G++
Sbjct: 1 MSIYVGNLSYEVTQEDISNVFAEYGSVKRVVLPTDRETGRL 41
>UniRef50_Q5CF61 Cluster: Dentin phosphoryn; n=2;
Cryptosporidium|Rep: Dentin phosphoryn - Cryptosporidium
hominis
Length = 286
Score = 37.1 bits (82), Expect = 0.14
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = +3
Query: 150 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251
SL V NL + T+P +R FER G V D+Y+P D
Sbjct: 91 SLLVRNLRFETSPGRVRHHFERYGPVRDVYLPLD 124
>UniRef50_O75821 Cluster: Eukaryotic translation initiation factor 3
subunit 4; n=36; Eumetazoa|Rep: Eukaryotic translation
initiation factor 3 subunit 4 - Homo sapiens (Human)
Length = 320
Score = 37.1 bits (82), Expect = 0.14
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +3
Query: 120 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
+P R D +++V NL+ T DL+ +F G + IY+ +D+T G+
Sbjct: 230 QPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQ 278
>UniRef50_A4RWB3 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 92
Score = 36.7 bits (81), Expect = 0.19
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +3
Query: 147 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
VS+ V N+++ +D+R F+ G V D+Y+P+DR G+
Sbjct: 1 VSVLVRNISFDAHEDDIRDKFQAYGNVLDVYMPKDRETGR 40
>UniRef50_Q54PB2 Cluster: RNA-binding region-containing protein;
n=1; Dictyostelium discoideum AX4|Rep: RNA-binding
region-containing protein - Dictyostelium discoideum AX4
Length = 895
Score = 36.7 bits (81), Expect = 0.19
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +3
Query: 159 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251
V NL+Y T EDL +VF + G++ +I+IP D
Sbjct: 365 VRNLSYSTKEEDLEKVFSKFGKISEIHIPID 395
>UniRef50_A7AT82 Cluster: RNA recognition motif containing protein;
n=1; Babesia bovis|Rep: RNA recognition motif containing
protein - Babesia bovis
Length = 253
Score = 36.7 bits (81), Expect = 0.19
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +3
Query: 150 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQG 263
S+ + NL Y T ++R FE G++ D+Y+P+D + G
Sbjct: 10 SVLIRNLKYSTRASEVREAFECFGKIRDVYLPQDYSSG 47
>UniRef50_Q4P7G1 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 308
Score = 36.7 bits (81), Expect = 0.19
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +3
Query: 138 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQG 263
D + +L+V NL+ +DLR +F R G V +Y+ RDR G
Sbjct: 222 DDLPTLRVTNLSEDADDDDLRELFMRFGRVVRVYVGRDRETG 263
>UniRef50_Q8WXF1 Cluster: Paraspeckle component 1; n=27;
Euteleostomi|Rep: Paraspeckle component 1 - Homo sapiens
(Human)
Length = 523
Score = 36.7 bits (81), Expect = 0.19
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +3
Query: 153 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQG 263
L V NL T ED +R+FER GE +++I RDR G
Sbjct: 84 LFVGNLPTDITEEDFKRLFERYGEPSEVFINRDRGFG 120
>UniRef50_P41891 Cluster: Protein gar2; n=12; Ascomycota|Rep:
Protein gar2 - Schizosaccharomyces pombe (Fission yeast)
Length = 500
Score = 36.7 bits (81), Expect = 0.19
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +3
Query: 159 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGKVEDSPS*GFSSVVTLKK 317
V NL++ T +DL F CG++ I +P D G+++ FS + + KK
Sbjct: 370 VGNLSFNATEDDLSTAFGGCGDIQSIRLPTDPQSGRLKGFGYVTFSDIDSAKK 422
>UniRef50_Q9FIU6 Cluster: Similarity to RNA-binding protein; n=4;
Magnoliophyta|Rep: Similarity to RNA-binding protein -
Arabidopsis thaliana (Mouse-ear cress)
Length = 156
Score = 36.3 bits (80), Expect = 0.25
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +3
Query: 129 PRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQG 263
P+ + +L V L+ RTT E LR F + GEV D + DR G
Sbjct: 50 PQAEPSTNLFVSGLSKRTTSEGLRTAFAQFGEVADAKVVTDRVSG 94
>UniRef50_Q1PDV2 Cluster: 28 kDa SC35-like splicing factor; n=9;
Magnoliophyta|Rep: 28 kDa SC35-like splicing factor -
Arabidopsis thaliana (Mouse-ear cress)
Length = 236
Score = 36.3 bits (80), Expect = 0.25
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +3
Query: 141 GMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
G L + NL P DLR FER G + DIY+PR+ G+
Sbjct: 45 GPSGLLIRNLPLDARPNDLRDSFERFGPLKDIYLPRNYYTGE 86
>UniRef50_A2YR27 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 221
Score = 36.3 bits (80), Expect = 0.25
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +3
Query: 123 PPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQG 263
PPP+ D +L + L+ RTT + L+ F + GEV + DR G
Sbjct: 28 PPPKADPSPNLFISGLSKRTTTDGLKEAFAKFGEVIHARVVTDRVTG 74
>UniRef50_A5DDT0 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 886
Score = 36.3 bits (80), Expect = 0.25
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Frame = +3
Query: 93 SILLKMSYGRPPPRIDGMVSLK-----VDNLTYRTTPEDLRRVFERCGEVGDIYIP 245
S L ++ RPP +I+ + V NL Y TT +LR VFE+ GE+ +I +P
Sbjct: 666 SFKLVVAISRPPKKIETRKQVMHRQVCVKNLDYYTTESELRTVFEKHGELEEISLP 721
Score = 33.1 bits (72), Expect = 2.4
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 120 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGD 233
+P R + +KV+N+ T DL+ +F CGE+ D
Sbjct: 510 KPAARNRESLKIKVENIPKSATENDLKLIFSDCGEIAD 547
>UniRef50_UPI0000498562 Cluster: RNA-binding protein; n=1; Entamoeba
histolytica HM-1:IMSS|Rep: RNA-binding protein -
Entamoeba histolytica HM-1:IMSS
Length = 135
Score = 35.9 bits (79), Expect = 0.33
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +3
Query: 150 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIP 245
S+ V N+ Y TT E+L +FERCG V + IP
Sbjct: 40 SVHVSNVEYTTTKEELEDLFERCGVVLKVNIP 71
>UniRef50_A0KJ75 Cluster: RNA-binding protein; n=5; Bacteria|Rep:
RNA-binding protein - Aeromonas hydrophila subsp.
hydrophila (strain ATCC 7966 / NCIB 9240)
Length = 95
Score = 35.9 bits (79), Expect = 0.33
Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Frame = +3
Query: 135 IDGMVSLKVDNLTYRTTPEDLRRVFERCGEVG--DIYIPRDRTQGK 266
+DGM + V NL+YR T ++L VF + G+V DI I RD Q K
Sbjct: 1 MDGM-KIYVGNLSYRMTADELTTVFSQFGQVDKVDIIIDRDTGQSK 45
>UniRef50_Q75EU7 Cluster: AAL018Wp; n=2; Eremothecium gossypii|Rep:
AAL018Wp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 337
Score = 35.9 bits (79), Expect = 0.33
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +3
Query: 150 SLKVDNLTYRTTPEDLRRVFERCGEV--GDIYIPRDRTQG 263
S+ + NLTY TTPEDLR++F G V DI R +G
Sbjct: 8 SVFIGNLTYDTTPEDLRQLFGEVGHVVRADIITSRGHHRG 47
>UniRef50_Q2H622 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 361
Score = 35.9 bits (79), Expect = 0.33
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 153 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQG 263
L + N+ Y TT +L R+F+ G V D+ + DRT G
Sbjct: 233 LFIGNIPYETTDAELNRIFQGMGNVKDVRVAVDRTTG 269
>UniRef50_P73557 Cluster: RNA-binding protein; n=2;
Chroococcales|Rep: RNA-binding protein - Synechocystis
sp. (strain PCC 6803)
Length = 83
Score = 35.5 bits (78), Expect = 0.44
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +3
Query: 147 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGKV 269
+S+ V NL+Y+ T +D+ VF G V + +P DR G++
Sbjct: 1 MSIYVGNLSYQATEDDVLTVFSEYGTVKRVQLPTDRETGRM 41
>UniRef50_Q57YP5 Cluster: RNA-binding protein, putative; n=1;
Trypanosoma brucei|Rep: RNA-binding protein, putative -
Trypanosoma brucei
Length = 184
Score = 35.5 bits (78), Expect = 0.44
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +3
Query: 156 KVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGKVEDSPS*GFSSVVTLKK 317
K DN TTPE+L +F CG + + + RDRT G+++ + FS+ + K
Sbjct: 113 KGDNGGPTTTPEELAHLFADCGPILNCTLLRDRTTGELKGTAYVEFSTYTGMGK 166
>UniRef50_Q4UI71 Cluster: RNA-binding (SR) protein, putative; n=2;
Theileria|Rep: RNA-binding (SR) protein, putative -
Theileria annulata
Length = 303
Score = 35.5 bits (78), Expect = 0.44
Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +3
Query: 150 SLKV--DNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
SLK+ LT TTPEDL+ F + GEV I RD+ G+
Sbjct: 27 SLKIFAGGLTRSTTPEDLKEYFSKYGEVTHTEIVRDKNTGR 67
>UniRef50_Q4UFE0 Cluster: Nucleolar, RNA-binding protein, putative;
n=2; Theileria|Rep: Nucleolar, RNA-binding protein,
putative - Theileria annulata
Length = 560
Score = 35.5 bits (78), Expect = 0.44
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +3
Query: 159 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGKVEDSPS*GFSSVVTLKK 317
+ NL + ++ E LR +F CG+V Y+P+ + GK F++V K+
Sbjct: 425 IRNLNFNSSEEGLRELFSECGQVTRCYVPKFQDTGKPMGIGFISFTTVEAAKR 477
>UniRef50_Q44554 Cluster: Putative RNA-binding protein rbpB; n=41;
Bacteria|Rep: Putative RNA-binding protein rbpB -
Anabaena sp. (strain PCC 7120)
Length = 103
Score = 35.5 bits (78), Expect = 0.44
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +3
Query: 147 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGKV 269
+S+ V NL+Y T E L VF G V + +P DR G+V
Sbjct: 1 MSIYVGNLSYDVTEESLNAVFAEYGSVKRVQLPVDRETGRV 41
>UniRef50_O75494 Cluster: FUS-interacting serine-arginine-rich
protein 1; n=55; Tetrapoda|Rep: FUS-interacting
serine-arginine-rich protein 1 - Homo sapiens (Human)
Length = 262
Score = 35.5 bits (78), Expect = 0.44
Identities = 21/46 (45%), Positives = 25/46 (54%)
Frame = +3
Query: 114 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251
Y RPP SL V N+ T EDLRR F R G + D+Y+P D
Sbjct: 4 YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44
>UniRef50_UPI000023E598 Cluster: hypothetical protein FG10156.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG10156.1 - Gibberella zeae PH-1
Length = 420
Score = 35.1 bits (77), Expect = 0.58
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 159 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
V N+ ++TT EDL R FE+CGE+ + + GK
Sbjct: 236 VGNMGFKTTDEDLSRNFEKCGEIEWVKVATFEDTGK 271
>UniRef50_Q3J7I0 Cluster: RNA-binding protein, RNP-1; n=1;
Nitrosococcus oceani ATCC 19707|Rep: RNA-binding
protein, RNP-1 - Nitrosococcus oceani (strain ATCC 19707
/ NCIMB 11848)
Length = 119
Score = 35.1 bits (77), Expect = 0.58
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +3
Query: 144 MVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDR 254
+V++ V NL+Y+ T EDLR FE GEV + D+
Sbjct: 17 IVNIYVGNLSYQVTDEDLRAAFENYGEVSSAKVIVDK 53
>UniRef50_Q9ZVW9 Cluster: Putative splicing factor; n=3; Arabidopsis
thaliana|Rep: Putative splicing factor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 561
Score = 35.1 bits (77), Expect = 0.58
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +3
Query: 129 PRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRT 257
P G L V NL + +DLR+VFE G V + +PRD T
Sbjct: 279 PYSGGARRLYVGNLHINMSEDDLRKVFESFGSVELVQVPRDET 321
>UniRef50_Q4U9S0 Cluster: RNA-binding protein, putative; n=2;
Theileria|Rep: RNA-binding protein, putative - Theileria
annulata
Length = 245
Score = 35.1 bits (77), Expect = 0.58
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +3
Query: 165 NLTYRTTPEDLRRVFERCGEVGDIYIPRD 251
NL + T+P+ +R FE+ G++ D+Y+P D
Sbjct: 13 NLRFSTSPQVVREAFEKFGKIRDVYLPLD 41
>UniRef50_UPI00015B633B Cluster: PREDICTED: similar to conserved
hypothetical protein; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to conserved hypothetical protein -
Nasonia vitripennis
Length = 552
Score = 34.7 bits (76), Expect = 0.77
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = +3
Query: 117 GRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYI---PRDRTQG 263
GRP D L + NL + + DLR+VFER G V D+ + DRT+G
Sbjct: 446 GRPGGYTDAH-QLFLGNLPHNASESDLRQVFERYGRVADLRVHSKQNDRTKG 496
>UniRef50_A4S763 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 288
Score = 34.7 bits (76), Expect = 0.77
Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +3
Query: 135 IDGMVS--LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
+DG S L V N+ + TT EDLR +F CG V + IP R QG+
Sbjct: 3 VDGGSSARLYVGNIPWSTTIEDLRELFAECGGVTRVDIPTGR-QGR 47
>UniRef50_Q8IIT2 Cluster: Nucleic acid binding factor, putative;
n=1; Plasmodium falciparum 3D7|Rep: Nucleic acid binding
factor, putative - Plasmodium falciparum (isolate 3D7)
Length = 580
Score = 34.7 bits (76), Expect = 0.77
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = +3
Query: 153 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251
L V L TT E LR FE+ GE+ DIY+P D
Sbjct: 504 LFVTKLNSATTIEKLRNYFEKFGEIIDIYMPND 536
>UniRef50_A0DWV5 Cluster: Chromosome undetermined scaffold_67, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_67,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 656
Score = 34.7 bits (76), Expect = 0.77
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +3
Query: 153 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDR 254
L V N+ Y +T ++L+ VFE+ G V I IP+ R
Sbjct: 193 LYVTNIPYTSTEQELKTVFEKYGTVSSIKIPKQR 226
Score = 31.9 bits (69), Expect = 5.4
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +3
Query: 147 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQG 263
+++ V N+ +R DL +F R G+V +Y+ +R+ G
Sbjct: 386 ITIFVKNIQFRVNETDLNELFSRYGQVNKVYLAPNRSIG 424
>UniRef50_Q94AC3 Cluster: AT4g36960/C7A10_400; n=11;
Magnoliophyta|Rep: AT4g36960/C7A10_400 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 379
Score = 33.9 bits (74), Expect = 1.3
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 114 YGRPPPRIDGMVS-LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251
YGR P G+ + + V L + +DLR F R G + D YIP+D
Sbjct: 228 YGRGEPTTRGIGNKIFVGRLPQEASVDDLRDYFGRFGHIQDAYIPKD 274
>UniRef50_Q6AWW6 Cluster: At2g47310; n=2; Arabidopsis thaliana|Rep:
At2g47310 - Arabidopsis thaliana (Mouse-ear cress)
Length = 512
Score = 33.9 bits (74), Expect = 1.3
Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +3
Query: 138 DGMVS-LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
DG ++ L V ++ T D+R+VFE+ G V +I +P+D+ G+
Sbjct: 106 DGSIAKLYVAPISKTATEYDIRQVFEKYGNVTEIILPKDKMTGE 149
>UniRef50_O23189 Cluster: RNA-binding like protein; n=1; Arabidopsis
thaliana|Rep: RNA-binding like protein - Arabidopsis
thaliana (Mouse-ear cress)
Length = 306
Score = 33.9 bits (74), Expect = 1.3
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 114 YGRPPPRIDGMVS-LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251
YGR P G+ + + V L + +DLR F R G + D YIP+D
Sbjct: 172 YGRGEPTTRGIGNKIFVGRLPQEASVDDLRDYFGRFGHIQDAYIPKD 218
>UniRef50_Q2GTP8 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 250
Score = 33.9 bits (74), Expect = 1.3
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +3
Query: 150 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
S+ V N+ Y T+PE+L+ F+ CG + + I D+ G+
Sbjct: 128 SIFVGNVDYSTSPEELQAHFQSCGSINRVTILLDKFTGQ 166
>UniRef50_A3LV94 Cluster: U4/U6 snRNA-associated splicing factor;
n=1; Pichia stipitis|Rep: U4/U6 snRNA-associated
splicing factor - Pichia stipitis (Yeast)
Length = 837
Score = 33.9 bits (74), Expect = 1.3
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 126 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYI 242
PPR + +KV+NLT T D+ R F CG + ++ I
Sbjct: 456 PPRSRENLMVKVENLTSDVTRNDITRFFSDCGSIRELSI 494
>UniRef50_UPI0000E47947 Cluster: PREDICTED: similar to GA10247-PA;
n=4; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to GA10247-PA - Strongylocentrotus purpuratus
Length = 519
Score = 33.5 bits (73), Expect = 1.8
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +3
Query: 153 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPR 248
L + LT TT EDL +F + GEV D++IP+
Sbjct: 207 LFIGRLTSDTTKEDLFDIFSKYGEVVDVFIPK 238
>UniRef50_Q8W2K5 Cluster: Phragmoplastin-interacting protein PHIP1;
n=3; Arabidopsis thaliana|Rep:
Phragmoplastin-interacting protein PHIP1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 597
Score = 33.5 bits (73), Expect = 1.8
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +3
Query: 105 KMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
K S G P +DG + + NL + TT D+R++F C + + + +++ G+
Sbjct: 248 KTSSGFAPEMVDGYNRVYIGNLAWDTTERDIRKLFSDC-VINSVRLGKNKETGE 300
>UniRef50_Q5CWK5 Cluster: 5x RRM. Mrd1p like, splicing related; n=3;
Cryptosporidium|Rep: 5x RRM. Mrd1p like, splicing
related - Cryptosporidium parvum Iowa II
Length = 806
Score = 33.5 bits (73), Expect = 1.8
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +3
Query: 153 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQG 263
L V N++Y TT EDL + F + GEV + I R G
Sbjct: 289 LMVVNISYSTTEEDLNKFFSKWGEVKSVNIIRSPESG 325
>UniRef50_A7RXA3 Cluster: Predicted protein; n=5; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 470
Score = 33.5 bits (73), Expect = 1.8
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +3
Query: 150 SLKVDNLTYRTTPEDLRRVFERCGEVGDI-YIPRDR 254
+L + N+ T E+L +FE CG+V D ++P+DR
Sbjct: 395 TLHLSNIPESVTEEELTSMFEDCGDVADFRFLPKDR 430
>UniRef50_Q4PBU3 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 588
Score = 33.5 bits (73), Expect = 1.8
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 159 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
+ L + TT + LRR F + GEVG+ I RD G+
Sbjct: 173 IGGLNWDTTEDSLRRYFSQFGEVGNCAIMRDNMTGR 208
>UniRef50_O94432 Cluster: mRNA cleavage factor complex subunit; n=1;
Schizosaccharomyces pombe|Rep: mRNA cleavage factor
complex subunit - Schizosaccharomyces pombe (Fission
yeast)
Length = 474
Score = 33.5 bits (73), Expect = 1.8
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +3
Query: 123 PPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
P R DG + + L + TT + LR FE+ GEV D + RD T G+
Sbjct: 157 PFNREDG--KMFIGGLNWETTDDSLRDYFEQFGEVLDCTVMRDSTTGR 202
>UniRef50_A0WC53 Cluster: RNA-binding region RNP-1; n=2;
Desulfuromonadales|Rep: RNA-binding region RNP-1 -
Geobacter lovleyi SZ
Length = 109
Score = 33.1 bits (72), Expect = 2.4
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +3
Query: 153 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
L V +L Y T +DLRR+F G V ++I D GK
Sbjct: 5 LYVGHLPYEATADDLRRMFSVAGTVTSVHIITDPATGK 42
>UniRef50_Q2A9J1 Cluster: Ulp1 protease family protein; n=2;
Brassica oleracea|Rep: Ulp1 protease family protein -
Brassica oleracea (Wild cabbage)
Length = 640
Score = 33.1 bits (72), Expect = 2.4
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 267 VEDSPS*GFSSVVTLKKPWTRWTDECW-TAGNFAXRWRDMVAP 392
VED+P+ ++ +KKPW +WT +CW G + +V+P
Sbjct: 271 VEDTPAEKIIKLMFVKKPW-KWTMDCWKVTGTWVNTKSAVVSP 312
>UniRef50_Q4H2Q6 Cluster: Ci-Tardbp protein; n=1; Ciona
intestinalis|Rep: Ci-Tardbp protein - Ciona intestinalis
(Transparent sea squirt)
Length = 440
Score = 33.1 bits (72), Expect = 2.4
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +3
Query: 159 VDNLTYRTTPEDLRRVFERCGEVGDIYIP 245
V +T + T +++R+ FE+ G+V D+YIP
Sbjct: 227 VGRITEKMTKDEIRQYFEQFGDVDDVYIP 255
>UniRef50_Q9Y7Y3 Cluster: RNA-binding protein; n=1;
Schizosaccharomyces pombe|Rep: RNA-binding protein -
Schizosaccharomyces pombe (Fission yeast)
Length = 233
Score = 33.1 bits (72), Expect = 2.4
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +3
Query: 138 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
D V L V NL ++ E L+ F+R G+V + IP D+T G+
Sbjct: 89 DRKVILFVGNLPKDSSVETLQLHFKRAGQVPSVRIPTDKTSGR 131
>UniRef50_Q9C222 Cluster: Putative uncharacterized protein B8L3.050;
n=1; Neurospora crassa|Rep: Putative uncharacterized
protein B8L3.050 - Neurospora crassa
Length = 488
Score = 33.1 bits (72), Expect = 2.4
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +3
Query: 141 GMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
G + V NL++ TT +DLR F++CG + + + GK
Sbjct: 287 GSTKIFVGNLSFDTTEDDLRNHFDKCGAIRWVKVATFEDSGK 328
>UniRef50_Q57014 Cluster: Putative RNA-binding protein rbpA; n=70;
cellular organisms|Rep: Putative RNA-binding protein
rbpA - Synechocystis sp. (strain PCC 6803)
Length = 101
Score = 33.1 bits (72), Expect = 2.4
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 147 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGKV 269
+S+ V NL+Y + DL VF G V + +P DR G++
Sbjct: 1 MSIYVGNLSYDVSEADLTAVFAEYGSVKRVQLPTDRETGRM 41
>UniRef50_P38922 Cluster: Protein HRB1; n=6; Saccharomycetales|Rep:
Protein HRB1 - Saccharomyces cerevisiae (Baker's yeast)
Length = 454
Score = 33.1 bits (72), Expect = 2.4
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +3
Query: 150 SLKVDNLTYRTTPEDLRRVFERCGEV--GDIYIPRDRTQG 263
S+ V NLTY +TPEDL F + G+V DI R +G
Sbjct: 162 SIFVGNLTYDSTPEDLTEFFSQIGKVVRADIITSRGHHRG 201
>UniRef50_Q98A79 Cluster: Carbohydrate kinase; n=1; Mesorhizobium
loti|Rep: Carbohydrate kinase - Rhizobium loti
(Mesorhizobium loti)
Length = 352
Score = 32.7 bits (71), Expect = 3.1
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = +3
Query: 177 RTTPEDLRRVFERCGEVGDIYIPRDRTQGKVEDSPS*GFSSV 302
R P+DLRR + G +GD P DRTQ E +P G V
Sbjct: 291 RPRPQDLRRPWLTGGRIGD---PADRTQATAEPAPRGGTGGV 329
>UniRef50_Q39SC4 Cluster: RNA-binding region RNP-1; n=2;
Geobacter|Rep: RNA-binding region RNP-1 - Geobacter
metallireducens (strain GS-15 / ATCC 53774 / DSM 7210)
Length = 134
Score = 32.7 bits (71), Expect = 3.1
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +3
Query: 153 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
L V +++Y T +DLRR+F G V +++ DR G+
Sbjct: 7 LYVGHMSYEATEDDLRRLFTVAGTVTSVHLITDRDTGE 44
>UniRef50_Q8ILQ0 Cluster: Spliceosome-associated protein, putative;
n=6; Plasmodium|Rep: Spliceosome-associated protein,
putative - Plasmodium falciparum (isolate 3D7)
Length = 484
Score = 32.7 bits (71), Expect = 3.1
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +3
Query: 150 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQG 263
+L + NL + E L +F +CG V +++IPRD+ G
Sbjct: 21 TLYIANLDAQVDEEILCELFMQCGNVKNVHIPRDKING 58
>UniRef50_Q5CWM4 Cluster: U2 snRNP. Hsh49p, RRM domain containing
protein; n=3; Cryptosporidium|Rep: U2 snRNP. Hsh49p, RRM
domain containing protein - Cryptosporidium parvum Iowa
II
Length = 216
Score = 32.7 bits (71), Expect = 3.1
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 150 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQG 263
+L NL + E L +F +CG V ++IPRD+ G
Sbjct: 24 TLYCGNLENKVDEEMLAELFSQCGPVKSVHIPRDKVTG 61
>UniRef50_Q4MZK1 Cluster: Nucleic acid binding factor, putative;
n=2; Theileria|Rep: Nucleic acid binding factor,
putative - Theileria parva
Length = 421
Score = 32.7 bits (71), Expect = 3.1
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 153 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251
L V + + T+ LR F + GEV D+YIP+D
Sbjct: 340 LFVGRIAFETSVHSLRTYFSQFGEVIDVYIPKD 372
>UniRef50_A5KAW4 Cluster: Ser/Arg-rich splicing factor, putative;
n=6; Plasmodium|Rep: Ser/Arg-rich splicing factor,
putative - Plasmodium vivax
Length = 328
Score = 32.7 bits (71), Expect = 3.1
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +3
Query: 147 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251
+SL + L Y T+P +R F++ G + D+Y+P D
Sbjct: 12 MSLLIRKLKYDTSPSMVREKFKKYGAIKDVYLPID 46
>UniRef50_A5K494 Cluster: Nucleic acid binding factor, putative;
n=2; Plasmodium|Rep: Nucleic acid binding factor,
putative - Plasmodium vivax
Length = 753
Score = 32.7 bits (71), Expect = 3.1
Identities = 17/33 (51%), Positives = 19/33 (57%)
Frame = +3
Query: 153 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251
L V L TT E LR FE GE+ DIY+P D
Sbjct: 665 LFVTKLNSVTTIETLRNYFEAFGEIIDIYMPND 697
>UniRef50_A2EQG8 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 332
Score = 32.7 bits (71), Expect = 3.1
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +3
Query: 180 TTPED-LRRVFERCGEVGDIYIPRDRTQGK 266
T ED LR++F GE+ + IPRDR GK
Sbjct: 181 TVTEDMLRKLFSNAGEIDHVKIPRDRETGK 210
>UniRef50_A2EJG8 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 108
Score = 32.7 bits (71), Expect = 3.1
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3
Query: 144 MVSLKVDNLTYRTTPEDLRRVFERCGEV 227
M + + NL++RTTP+DL R F GE+
Sbjct: 1 MSQVSITNLSFRTTPDDLYRAFSPFGEL 28
>UniRef50_Q6FS32 Cluster: Similar to sp|P38922 Saccharomyces
cerevisiae YNL004w HRB1; n=1; Candida glabrata|Rep:
Similar to sp|P38922 Saccharomyces cerevisiae YNL004w
HRB1 - Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 443
Score = 32.7 bits (71), Expect = 3.1
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +3
Query: 150 SLKVDNLTYRTTPEDLRRVFERCGEV--GDIYIPRDRTQG 263
S+ V NLTY TPEDL+ F + G+V DI R +G
Sbjct: 108 SIFVGNLTYDCTPEDLKDFFSQVGKVVRADIITSRGHHRG 147
>UniRef50_Q0TVC9 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 341
Score = 32.7 bits (71), Expect = 3.1
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +3
Query: 150 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251
+L + NL Y T E L++VF R GEV + I D
Sbjct: 150 TLYIGNLYYEVTTEQLQKVFSRFGEVASVKIVYD 183
>UniRef50_Q44560 Cluster: Putative RNA-binding protein rbpA; n=4;
Bacteria|Rep: Putative RNA-binding protein rbpA -
Anabaena sp. (strain PCC 7120)
Length = 102
Score = 32.7 bits (71), Expect = 3.1
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +3
Query: 147 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
+S+ V NL+Y T + L VF G V + +P DR G+
Sbjct: 1 MSIYVGNLSYEVTQDTLSAVFAEYGTVKRVQLPTDRETGQ 40
>UniRef50_UPI000155BFA0 Cluster: PREDICTED: similar to FUSIP1
protein, partial; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to FUSIP1 protein, partial -
Ornithorhynchus anatinus
Length = 224
Score = 32.3 bits (70), Expect = 4.1
Identities = 19/45 (42%), Positives = 23/45 (51%)
Frame = +3
Query: 117 GRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251
G P P ID SL+ EDLRR F R G + D+Y+P D
Sbjct: 82 GDPGP-IDDAGSLRCVPAFVLERSEDLRREFGRYGPIVDVYVPLD 125
>UniRef50_UPI000023C9E8 Cluster: hypothetical protein FG01088.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG01088.1 - Gibberella zeae PH-1
Length = 577
Score = 32.3 bits (70), Expect = 4.1
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = -1
Query: 374 PSXREVPCRPTFVRPSCPGLLQRHDARKTSXRRILYFPLCPISGNVDITNFSAP 213
P+ + P P+F+RP + R + RK R+ FP +D T+F +P
Sbjct: 36 PTIPQFPS-PSFIRPKTSRMAAREEVRKQPASRVPSFPGSGSPHQMDFTSFQSP 88
>UniRef50_Q569S7 Cluster: LOC443584 protein; n=5; Xenopus|Rep:
LOC443584 protein - Xenopus laevis (African clawed frog)
Length = 414
Score = 32.3 bits (70), Expect = 4.1
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +3
Query: 138 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQG 263
D S V NL Y E +R+ F +CG+V + I RD+ G
Sbjct: 270 DNKRSAFVGNLPYDIEEESIRKHFSQCGDVQGVRIIRDQKTG 311
>UniRef50_Q57W18 Cluster: RNA-binding protein, putative; n=1;
Trypanosoma brucei|Rep: RNA-binding protein, putative -
Trypanosoma brucei
Length = 857
Score = 32.3 bits (70), Expect = 4.1
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +3
Query: 126 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQ 260
PP DG+ L V N+ + T D+R +F EV + +PR Q
Sbjct: 764 PPGCDGL-KLVVKNVPFEATERDIRDLFTAVSEVRSVRLPRKSHQ 807
>UniRef50_Q3HM26 Cluster: Sex-lethal isoform 1; n=4; Bombyx
mori|Rep: Sex-lethal isoform 1 - Bombyx mori (Silk moth)
Length = 336
Score = 32.3 bits (70), Expect = 4.1
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +3
Query: 102 LKMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQG 263
LK+SY RP +L V NL T + L +F + G + +I RD+ G
Sbjct: 134 LKVSYARPSGDDIKETNLYVTNLPRAITDDQLETIFGKYGRIVQKHILRDKNSG 187
>UniRef50_A0EH21 Cluster: Chromosome undetermined scaffold_96, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_96,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 304
Score = 32.3 bits (70), Expect = 4.1
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 159 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
+ NL Y D+ VF + GE+ D+++ RD+ GK
Sbjct: 33 IANLNYAMNEGDIAIVFSQYGEIVDVHLVRDKITGK 68
>UniRef50_A0DJK7 Cluster: Chromosome undetermined scaffold_53, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_53,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 786
Score = 32.3 bits (70), Expect = 4.1
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +3
Query: 153 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
L + NL + T E L RVF + G++ ++ I R +QG+
Sbjct: 96 LHIGNLPLQITEETLHRVFSKYGQIKEVKIIRKNSQGQ 133
>UniRef50_Q5K911 Cluster: Telomere maintenance protein, putative;
n=2; Filobasidiella neoformans|Rep: Telomere maintenance
protein, putative - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 951
Score = 32.3 bits (70), Expect = 4.1
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Frame = +3
Query: 138 DGMVSLKVDNLTYRTTPEDLRRVFERCGEV--GDIYI-PRDRTQG 263
DG V+L V NL YR +DL+ +F + G V D+ + P +R++G
Sbjct: 168 DGRVNLFVGNLPYRVRWQDLKDLFRKAGTVLRADVSLGPDNRSRG 212
>UniRef50_UPI00015B5DA3 Cluster: PREDICTED: similar to CG3335-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
CG3335-PA - Nasonia vitripennis
Length = 909
Score = 31.9 bits (69), Expect = 5.4
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +3
Query: 165 NLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
NL+Y T +D+R++FE G + ++ +P D K
Sbjct: 365 NLSYTATEDDIRKLFETYGPLSEVNLPIDMVTRK 398
Score = 31.9 bits (69), Expect = 5.4
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +3
Query: 150 SLKVDNLTYRTTPEDLRRVFERCGEV 227
+L V NL +RTT E LR+ F +CG++
Sbjct: 677 TLFVKNLDFRTTEEQLRKHFSKCGKL 702
>UniRef50_UPI0001560A8A Cluster: PREDICTED: hypothetical protein;
n=1; Equus caballus|Rep: PREDICTED: hypothetical protein
- Equus caballus
Length = 221
Score = 31.9 bits (69), Expect = 5.4
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +3
Query: 150 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYI 242
+L V NL++ TT E + +F RCG+V ++++
Sbjct: 97 TLYVGNLSFYTTEEHVLELFSRCGDVKNVFM 127
>UniRef50_UPI0000DB6CD5 Cluster: PREDICTED: similar to no on or off
transient A CG4211-PB, isoform B; n=1; Apis
mellifera|Rep: PREDICTED: similar to no on or off
transient A CG4211-PB, isoform B - Apis mellifera
Length = 565
Score = 31.9 bits (69), Expect = 5.4
Identities = 10/41 (24%), Positives = 27/41 (65%)
Frame = +3
Query: 132 RIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDR 254
+ G L + NLT T E+++++F++ GE+ ++++ +++
Sbjct: 145 KFSGRNRLYIGNLTNDVTEEEIQQMFQQYGEISELFVNKEK 185
>UniRef50_UPI000058483A Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 341
Score = 31.9 bits (69), Expect = 5.4
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 123 PPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251
PP R G L V ++ R DL R F+R G + D+++ R+
Sbjct: 4 PPDRAFGGYRLFVGDIGTRVGKNDLEREFDRYGPITDVWVARN 46
>UniRef50_UPI000051A8B9 Cluster: PREDICTED: similar to CG1316-PA;
n=2; Endopterygota|Rep: PREDICTED: similar to CG1316-PA
- Apis mellifera
Length = 482
Score = 31.9 bits (69), Expect = 5.4
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +3
Query: 189 EDLRRVFERCGEVGDIYIPRDRTQGK 266
+DLR+ FE+ G++ DI++ +DR G+
Sbjct: 39 DDLRKAFEKFGKIEDIWVVKDRITGE 64
>UniRef50_Q4SJ02 Cluster: Chromosome 21 SCAF14577, whole genome
shotgun sequence; n=2; Tetraodon nigroviridis|Rep:
Chromosome 21 SCAF14577, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 278
Score = 31.9 bits (69), Expect = 5.4
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +3
Query: 159 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
V L Y TT LR+ FE GE+ + + DR GK
Sbjct: 15 VGGLPYHTTDSSLRKYFEVFGEIEEAVVITDRQTGK 50
>UniRef50_Q02AB7 Cluster: RNP-1 like RNA-binding protein; n=2;
cellular organisms|Rep: RNP-1 like RNA-binding protein -
Solibacter usitatus (strain Ellin6076)
Length = 132
Score = 31.9 bits (69), Expect = 5.4
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 144 MVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
M ++ V NL + + E +R +FER G+V I DR G+
Sbjct: 1 MKNIFVGNLDFNASEEGVRSLFERYGQVNSARIMTDRETGR 41
>UniRef50_Q9M9E6 Cluster: F3F9.20; n=8; Arabidopsis thaliana|Rep:
F3F9.20 - Arabidopsis thaliana (Mouse-ear cress)
Length = 302
Score = 31.9 bits (69), Expect = 5.4
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +3
Query: 111 SYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
SY R P + V L + T +++RR FE+ GE+ + I D+ GK
Sbjct: 5 SYYRSPFGDTTYTKVFVGGLAWETPTDEMRRYFEQFGEILEAVIITDKNTGK 56
>UniRef50_Q9LU62 Cluster: Similarity to poly(A)-binding protein II;
n=17; Magnoliophyta|Rep: Similarity to poly(A)-binding
protein II - Arabidopsis thaliana (Mouse-ear cress)
Length = 267
Score = 31.9 bits (69), Expect = 5.4
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +3
Query: 150 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDR 254
S+ V N+ Y TPE++++ F+ CG V + I D+
Sbjct: 104 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK 138
>UniRef50_Q8GU29 Cluster: Glycin-rich RNA binding protein; n=6;
cellular organisms|Rep: Glycin-rich RNA binding protein
- Polytomella sp. Pringsheim 198.80
Length = 177
Score = 31.9 bits (69), Expect = 5.4
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +3
Query: 153 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
L V NL++ EDLR F + GEV + I DR G+
Sbjct: 5 LYVGNLSWNAKEEDLRTYFGKFGEVEEASIALDRESGR 42
>UniRef50_A4RUB8 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 319
Score = 31.9 bits (69), Expect = 5.4
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +3
Query: 150 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
+L V N++ R LRR+FE CGEV + RD + K
Sbjct: 21 NLYVKNISERVDELTLRRLFEACGEVQSCCVIRDVSTNK 59
>UniRef50_Q6UDW5 Cluster: Erythrocyte membrane protein 1; n=5;
Plasmodium falciparum|Rep: Erythrocyte membrane protein 1
- Plasmodium falciparum
Length = 3027
Score = 31.9 bits (69), Expect = 5.4
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 126 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYI 242
PPR + + + L +T+PEDLR+ F +C V ++
Sbjct: 1679 PPRRQKLCVINLKFLNEKTSPEDLRKAFIQCAAVETFFL 1717
>UniRef50_Q5CX28 Cluster: RRM domain containing protein; T22E16.120
Sc35-like splicing factor; n=3; Cryptosporidium|Rep: RRM
domain containing protein; T22E16.120 Sc35-like splicing
factor - Cryptosporidium parvum Iowa II
Length = 344
Score = 31.9 bits (69), Expect = 5.4
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +3
Query: 150 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251
SL + +L + T +RR FER G + D+Y+P D
Sbjct: 28 SLLIRSLRFDTPTSLVRREFERFGAIRDVYLPLD 61
>UniRef50_Q5CRV5 Cluster: SPAC25G10.01-like RRM domain containing
protein; n=2; Cryptosporidium|Rep: SPAC25G10.01-like RRM
domain containing protein - Cryptosporidium parvum Iowa
II
Length = 253
Score = 31.9 bits (69), Expect = 5.4
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +3
Query: 138 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
D +L V L+ +T +DLRR+FE GEV D ++ + G+
Sbjct: 68 DPSCTLYVCRLSLKTKEDDLRRLFEDYGEVTDCHLVTNPLSGE 110
>UniRef50_Q17GF4 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 963
Score = 31.9 bits (69), Expect = 5.4
Identities = 11/43 (25%), Positives = 28/43 (65%)
Frame = +3
Query: 99 LLKMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEV 227
L+++S+ P +++ ++++D++ T E++R FE+ GE+
Sbjct: 102 LIRVSHVLEPVKLNYAAAIRIDDIAAGVTEEEIREHFEQAGEI 144
>UniRef50_Q5VVE2 Cluster: SMART/HDAC1 associated repressor protein;
n=5; Euteleostomi|Rep: SMART/HDAC1 associated repressor
protein - Homo sapiens (Human)
Length = 296
Score = 31.9 bits (69), Expect = 5.4
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +3
Query: 150 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPR 248
+L + NL TT DLR +F+R GE+ DI I +
Sbjct: 178 TLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKK 210
>UniRef50_Q2UQ21 Cluster: Predicted protein; n=3;
Pezizomycotina|Rep: Predicted protein - Aspergillus
oryzae
Length = 127
Score = 31.9 bits (69), Expect = 5.4
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 144 MVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
M L + L + TT E LR FE+ G V + + +DR G+
Sbjct: 1 MSKLFIGGLAWHTTDESLRSGFEKYGAVEEAIVVKDRDTGR 41
>UniRef50_A1C5R1 Cluster: Putative uncharacterized protein; n=1;
Aspergillus clavatus|Rep: Putative uncharacterized
protein - Aspergillus clavatus
Length = 1454
Score = 31.9 bits (69), Expect = 5.4
Identities = 22/79 (27%), Positives = 34/79 (43%)
Frame = +3
Query: 90 ISILLKMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGKV 269
+S+ K+S+ R PR+D + L +D TY T +L R + D Y
Sbjct: 223 VSVPRKVSFRRLSPRVDSKMPLDIDRTTYFRTIGNLLRNVSTSPWITDTYTALPFWPAYW 282
Query: 270 EDSPS*GFSSVVTLKKPWT 326
+D P SS + + WT
Sbjct: 283 QDEPLTSLSSEAS--QTWT 299
>UniRef50_O14327 Cluster: Polyadenylate-binding protein 2
(Poly(A)-binding protein 2) (Poly(A)- binding protein
II); n=22; Eukaryota|Rep: Polyadenylate-binding protein
2 (Poly(A)-binding protein 2) (Poly(A)- binding protein
II) - Schizosaccharomyces pombe (Fission yeast)
Length = 166
Score = 31.9 bits (69), Expect = 5.4
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +3
Query: 150 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQG 263
S+ V N+ Y TPE+L+ F CG V + I D+ G
Sbjct: 56 SVYVGNVDYSVTPEELQSHFASCGSVNRVTILCDKFTG 93
>UniRef50_Q96T58 Cluster: Msx2-interacting protein; n=14;
Eutheria|Rep: Msx2-interacting protein - Homo sapiens
(Human)
Length = 3664
Score = 31.9 bits (69), Expect = 5.4
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +3
Query: 150 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPR 248
+L + NL TT DLR +F+R GE+ DI I +
Sbjct: 439 TLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKK 471
>UniRef50_UPI00015B6013 Cluster: PREDICTED: similar to GA12086-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
GA12086-PA - Nasonia vitripennis
Length = 489
Score = 31.5 bits (68), Expect = 7.2
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +3
Query: 189 EDLRRVFERCGEVGDIYIPRDRTQGK 266
E+LR+ FE+ G + DI++ +DR G+
Sbjct: 40 EELRKAFEKFGNIEDIWVVKDRNTGE 65
>UniRef50_UPI0000E49D83 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 1890
Score = 31.5 bits (68), Expect = 7.2
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Frame = +3
Query: 237 YIPRDRTQGK--VEDSPS*GFSSVVT---LKKPWTRWTDECWTAGNFAXRWRDMVAPHRH 401
++P R+ G+ VE + G+ + T K W W T G RW+ +++P RH
Sbjct: 543 WVPISRSVGRCCVEVQQNVGYDLLTTQNVCSKTWLVWNGIA-TGGILIPRWKHLISPGRH 601
Query: 402 TGVV 413
G V
Sbjct: 602 RGQV 605
>UniRef50_Q74DJ2 Cluster: RNA-binding protein; n=2; Geobacter|Rep:
RNA-binding protein - Geobacter sulfurreducens
Length = 107
Score = 31.5 bits (68), Expect = 7.2
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 153 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
L V +++Y T +DLRR+F G V ++I D G+
Sbjct: 5 LYVGHMSYEATEDDLRRLFSVAGTVTSVHIITDPETGR 42
>UniRef50_Q9SJT4 Cluster: Expressed protein; n=1; Arabidopsis
thaliana|Rep: Expressed protein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 1003
Score = 31.5 bits (68), Expect = 7.2
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +3
Query: 153 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQG 263
L + NL ++ P D++ VF G V D++IP++ G
Sbjct: 333 LIIRNLPFQAKPSDIKVVFSAVGFVWDVFIPKNFETG 369
>UniRef50_A3AAN7 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 304
Score = 31.5 bits (68), Expect = 7.2
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 159 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
V L + TT E LRR ++R GE+ + + DR G+
Sbjct: 41 VGGLAWETTSERLRRFYDRFGEILEAVVITDRHSGR 76
>UniRef50_Q9W108 Cluster: CG3594-PA; n=3; Sophophora|Rep: CG3594-PA
- Drosophila melanogaster (Fruit fly)
Length = 250
Score = 31.5 bits (68), Expect = 7.2
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +3
Query: 153 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQG 263
L V NL + TT +DL F G V I IP+ R G
Sbjct: 116 LYVTNLNFETTKDDLELHFSAAGTVKSIRIPKKRRGG 152
>UniRef50_Q76P06 Cluster: Putative uncharacterized protein; n=2;
Dictyostelium discoideum|Rep: Putative uncharacterized
protein - Dictyostelium discoideum (Slime mold)
Length = 246
Score = 31.5 bits (68), Expect = 7.2
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 150 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQG 263
S+ V N+ Y++T + + F+ CG V I I D+T G
Sbjct: 126 SVYVGNVDYKSTHDQILAYFQSCGTVNRITILSDKTTG 163
>UniRef50_Q5TTQ2 Cluster: ENSANGP00000026814; n=3;
Endopterygota|Rep: ENSANGP00000026814 - Anopheles
gambiae str. PEST
Length = 358
Score = 31.5 bits (68), Expect = 7.2
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 153 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251
L + L YRTT + L+ FE+ G+V D+ + +D
Sbjct: 29 LFIGGLDYRTTDDTLKAYFEKWGKVVDVVVMKD 61
>UniRef50_Q17DU7 Cluster: RNA binding motif protein; n=3;
Culicidae|Rep: RNA binding motif protein - Aedes aegypti
(Yellowfever mosquito)
Length = 860
Score = 31.5 bits (68), Expect = 7.2
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 165 NLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGKVE 272
NL Y +DL+++FE+ G V +I +P D K++
Sbjct: 309 NLAYSVKEDDLKQLFEKYGPVAEIDLPIDSNTRKLK 344
>UniRef50_A7RU25 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 291
Score = 31.5 bits (68), Expect = 7.2
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +3
Query: 99 LLKMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPR 248
L ++ RP ++ L V L TT + L F + GEV D+YIP+
Sbjct: 183 LCEVRLPRPKEELNVPKKLFVGRLPESTTEKTLMEYFAQFGEVTDVYIPK 232
>UniRef50_A2EWD1 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 156
Score = 31.5 bits (68), Expect = 7.2
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +3
Query: 159 VDNLTYRTTPEDLRRVFERCGEVGDIYIPR-DRTQGK 266
V +L++ T + L+ VFE+ G + + IPR DR Q K
Sbjct: 30 VGSLSWSTNEDGLKAVFEKYGNITSVRIPRNDRDQSK 66
>UniRef50_Q8SSA1 Cluster: NUCLEOLAR PROTEIN OF THE GAR FAMILY; n=1;
Encephalitozoon cuniculi|Rep: NUCLEOLAR PROTEIN OF THE
GAR FAMILY - Encephalitozoon cuniculi
Length = 293
Score = 31.5 bits (68), Expect = 7.2
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +3
Query: 150 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGKVE 272
++ V N+ Y DL++ FE GEV + +P DR +++
Sbjct: 172 TIYVSNIPYECDKRDLKKYFEGMGEVVGMSLPYDRDNNRLK 212
>UniRef50_A7ED15 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 1321
Score = 31.5 bits (68), Expect = 7.2
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +3
Query: 129 PRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGKVEDSP 281
P I L + ++ P+D+ R C +IPRD+T G ++ P
Sbjct: 1027 PGIRKTTELLIQRYYWKGLPQDVERYIHNCSICRRAHIPRDKTPGLLQPLP 1077
>UniRef50_Q9BX46 Cluster: RNA-binding protein 24; n=52;
Eumetazoa|Rep: RNA-binding protein 24 - Homo sapiens
(Human)
Length = 236
Score = 31.5 bits (68), Expect = 7.2
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +3
Query: 159 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
V L Y TT LR+ FE GE+ + + DR GK
Sbjct: 15 VGGLPYHTTDASLRKYFEVFGEIEEAVVITDRQTGK 50
>UniRef50_Q1DXH0 Cluster: Polyadenylate-binding protein, cytoplasmic
and nuclear (Poly(A)- binding protein); n=11;
Pezizomycotina|Rep: Polyadenylate-binding protein,
cytoplasmic and nuclear (Poly(A)- binding protein) -
Coccidioides immitis
Length = 768
Score = 31.5 bits (68), Expect = 7.2
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 159 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
V N+ TT E+ R +FE+ GE+ + RD GK
Sbjct: 240 VKNIDQDTTEEEFRDLFEKFGEITSATLARDAESGK 275
>UniRef50_Q96EP5 Cluster: DAZ-associated protein 1; n=39;
Euteleostomi|Rep: DAZ-associated protein 1 - Homo
sapiens (Human)
Length = 407
Score = 31.5 bits (68), Expect = 7.2
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +3
Query: 138 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRT 257
D + L V L + TT E LR F + GEV D I +D+T
Sbjct: 7 DEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKT 46
>UniRef50_Q4SEZ3 Cluster: Chromosome 1 SCAF14609, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 1
SCAF14609, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 476
Score = 31.1 bits (67), Expect = 9.5
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +3
Query: 153 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRT 257
L V L + TT E LR F + GEV D I +D+T
Sbjct: 2 LFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKT 36
>UniRef50_Q6NPL0 Cluster: At4g09040; n=6; Arabidopsis thaliana|Rep:
At4g09040 - Arabidopsis thaliana (Mouse-ear cress)
Length = 304
Score = 31.1 bits (67), Expect = 9.5
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Frame = +3
Query: 153 LKVDNLTYRTTPEDLRRVFERCGEVGDIYI---PRDRTQGKV 269
L N+ + +TPED+R +FE+ G V DI + ++R +G V
Sbjct: 96 LIAQNVPWTSTPEDIRSLFEKYGSVIDIEMSMHKKERNRGLV 137
>UniRef50_A7PXT7 Cluster: Chromosome chr15 scaffold_37, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr15 scaffold_37, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 269
Score = 31.1 bits (67), Expect = 9.5
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = +3
Query: 153 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
L V NL + PEDLR F + G V + DR GK
Sbjct: 190 LYVGNLAWAIKPEDLRNHFSQFGTVVSARVVHDRKAGK 227
>UniRef50_Q8I2R8 Cluster: RNA-binding protein, putative; n=5;
Plasmodium|Rep: RNA-binding protein, putative -
Plasmodium falciparum (isolate 3D7)
Length = 202
Score = 31.1 bits (67), Expect = 9.5
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 150 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQG 263
S+ V N+ Y T PE+L+ +F CG + + I ++ G
Sbjct: 72 SIFVGNVDYSTQPEELQSLFSECGLINRVTILVNKNTG 109
>UniRef50_Q5BXS3 Cluster: SJCHGC01369 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC01369 protein - Schistosoma
japonicum (Blood fluke)
Length = 386
Score = 31.1 bits (67), Expect = 9.5
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 132 RIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPR 248
R D + V LT +PE LR+ F + G V D++IP+
Sbjct: 185 RQDVARKVHVGGLTEDISPETLRQHFSQYGRVSDVFIPK 223
>UniRef50_Q23RL2 Cluster: Nucleolar phosphoprotein, putative; n=2;
Tetrahymena thermophila|Rep: Nucleolar phosphoprotein,
putative - Tetrahymena thermophila SB210
Length = 491
Score = 31.1 bits (67), Expect = 9.5
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 159 VDNLTYRTTPEDLRRVFERCGEVGDIYI 242
V NL++RT E L++ F CG+V D I
Sbjct: 374 VGNLSFRTDKETLKKFFASCGKVADARI 401
>UniRef50_A7RLV0 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 862
Score = 31.1 bits (67), Expect = 9.5
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +3
Query: 165 NLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
NL Y + ED++ +FE+ G + ++ +P D+ K
Sbjct: 369 NLAYSCSEEDIQHLFEKFGPLSEVNLPLDKHTNK 402
>UniRef50_A7APZ7 Cluster: Putative uncharacterized protein; n=1;
Babesia bovis|Rep: Putative uncharacterized protein -
Babesia bovis
Length = 119
Score = 31.1 bits (67), Expect = 9.5
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +3
Query: 153 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRT 257
LKV NL + T E L+ +F G+V +I DRT
Sbjct: 77 LKVSNLDHTITREHLKELFSEVGKVEKTWIDYDRT 111
>UniRef50_A4V6N1 Cluster: HnRNP A2/B1 protein; n=1; Dugesia
japonica|Rep: HnRNP A2/B1 protein - Dugesia japonica
(Planarian)
Length = 386
Score = 31.1 bits (67), Expect = 9.5
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 159 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
V L +TT D+R+ F + G+V D+ RD+T K
Sbjct: 22 VGGLPPQTTESDMRQYFSKYGDVCDVVAMRDKTGNK 57
>UniRef50_A0BZZ4 Cluster: Chromosome undetermined scaffold_14, whole
genome shotgun sequence; n=4; Eukaryota|Rep: Chromosome
undetermined scaffold_14, whole genome shotgun sequence
- Paramecium tetraurelia
Length = 260
Score = 31.1 bits (67), Expect = 9.5
Identities = 11/39 (28%), Positives = 25/39 (64%)
Frame = +3
Query: 150 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
++ + NL + T + + +F +CG V +++IP+D+ G+
Sbjct: 20 TIYIGNLDQKVTDDIVWELFIQCGPVVNVHIPKDKISGE 58
>UniRef50_Q96V40 Cluster: Peptidyl-prolyl cis-trans isomerase; n=1;
Pichia angusta|Rep: Peptidyl-prolyl cis-trans isomerase
- Pichia angusta (Yeast) (Hansenula polymorpha)
Length = 301
Score = 31.1 bits (67), Expect = 9.5
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 180 TTPEDLRRVFERCGEVGDIYIPRDRTQG 263
T +DLR +F+R GE+ + I RDR G
Sbjct: 223 TAEDDLRLIFQRFGEITSVEIIRDRRTG 250
>UniRef50_Q7S1F3 Cluster: Predicted protein; n=4;
Pezizomycotina|Rep: Predicted protein - Neurospora
crassa
Length = 332
Score = 31.1 bits (67), Expect = 9.5
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 123 PPPRIDGMVS-LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDR 254
P P D S ++VDN+ Y T EDL +F R G + + + DR
Sbjct: 88 PEPFSDARGSKIRVDNIHYELTQEDLEGLFSRIGPLVKLDMKYDR 132
>UniRef50_Q5KLP3 Cluster: Poly(A) binding protein, putative; n=1;
Filobasidiella neoformans|Rep: Poly(A) binding protein,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 210
Score = 31.1 bits (67), Expect = 9.5
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +3
Query: 144 MVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQG 263
M S+ + N+ Y TPE+++ F+ CG + + I D+ G
Sbjct: 92 MRSVFIGNVDYGATPEEIQAHFQACGTINRVTILCDKFTG 131
>UniRef50_Q03251 Cluster: Glycine-rich RNA-binding protein 8; n=74;
cellular organisms|Rep: Glycine-rich RNA-binding protein
8 - Arabidopsis thaliana (Mouse-ear cress)
Length = 169
Score = 31.1 bits (67), Expect = 9.5
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +3
Query: 159 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
V L + T EDL+R F + G+V D I DR G+
Sbjct: 10 VGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGR 45
>UniRef50_P25555 Cluster: Single-strand telomeric DNA-binding
protein GBP2; n=2; Saccharomyces cerevisiae|Rep:
Single-strand telomeric DNA-binding protein GBP2 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 427
Score = 31.1 bits (67), Expect = 9.5
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +3
Query: 150 SLKVDNLTYRTTPEDLRRVFERCGEV 227
S+ V NLT+ TPEDL+ +F GEV
Sbjct: 123 SIFVRNLTFDCTPEDLKELFGTVGEV 148
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 370,965,083
Number of Sequences: 1657284
Number of extensions: 6636929
Number of successful extensions: 15983
Number of sequences better than 10.0: 151
Number of HSP's better than 10.0 without gapping: 15654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15979
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 19389441554
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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